RNA–Protein interactions for RNA: ENST00000370361.5

VMA21-202, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 5 BASIC

Gene VMA21, Length 693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-202ENST00000370361 NCAPG2Q86XI2 1143 aa19.27■□□□□ 0.68
VMA21-202ENST00000370361 RIOX2Q8IUF8 465 aa19.27■□□□□ 0.68
VMA21-202ENST00000370361 ATG4CQ96DT6 458 aa19.27■□□□□ 0.68
VMA21-202ENST00000370361 PPP1R9AQ9ULJ8 1098 aa19.27■□□□□ 0.68
VMA21-202ENST00000370361 PCDHB15Q9Y5E8 787 aa19.27■□□□□ 0.68
VMA21-202ENST00000370361 FRMPD3Q5JV73 1810 aa19.27■□□□□ 0.68
VMA21-202ENST00000370361 MINDY4BA8MYZ0 360 aa19.26■□□□□ 0.67
VMA21-202ENST00000370361 APPP05067 770 aa19.26■□□□□ 0.67
VMA21-202ENST00000370361 CYBAP13498 195 aa19.26■□□□□ 0.67
VMA21-202ENST00000370361 PDE4BQ07343 736 aa19.26■□□□□ 0.67
VMA21-202ENST00000370361 CLEC10AQ8IUN9 316 aa19.26■□□□□ 0.67
VMA21-202ENST00000370361 C7orf61Q8IZ16 206 aa19.26■□□□□ 0.67
VMA21-202ENST00000370361 ZNF444Q8N0Y2 327 aaPredicted RBP19.26■□□□□ 0.67
VMA21-202ENST00000370361 NPLOC4Q8TAT6 608 aa19.26■□□□□ 0.67
VMA21-202ENST00000370361 PI4K2BQ8TCG2 481 aa19.26■□□□□ 0.67
VMA21-202ENST00000370361 FLRT1Q9NZU1 646 aa19.26■□□□□ 0.67
VMA21-202ENST00000370361 DIS3Q9Y2L1 958 aaKnown RBP19.26■□□□□ 0.67
VMA21-202ENST00000370361 PFASO15067 1338 aa19.25■□□□□ 0.67
VMA21-202ENST00000370361 PLIN4Q96Q06 1357 aa19.25■□□□□ 0.67
VMA21-202ENST00000370361 DNM1LO00429 736 aa19.25■□□□□ 0.67
VMA21-202ENST00000370361 VWA5AO00534 786 aa19.25■□□□□ 0.67
VMA21-202ENST00000370361 ARRDC4Q8NCT1 418 aa19.25■□□□□ 0.67
VMA21-202ENST00000370361 FSD1Q9BTV5 496 aa19.25■□□□□ 0.67
VMA21-202ENST00000370361 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.25■□□□□ 0.67
VMA21-202ENST00000370361 SEPT4O43236 478 aa19.24■□□□□ 0.67
VMA21-202ENST00000370361 CNGA1P29973 690 aa19.24■□□□□ 0.67
VMA21-202ENST00000370361 STAT3P40763 770 aa19.24■□□□□ 0.67
VMA21-202ENST00000370361 TMEM132BQ14DG7 1078 aa19.24■□□□□ 0.67
VMA21-202ENST00000370361 TSHZ3Q63HK5 1081 aa19.24■□□□□ 0.67
VMA21-202ENST00000370361 IFNL3Q8IZI9 196 aa19.24■□□□□ 0.67
VMA21-202ENST00000370361 MKL1Q969V6 931 aa19.24■□□□□ 0.67
VMA21-202ENST00000370361 GDF15Q99988 308 aa19.24■□□□□ 0.67
VMA21-202ENST00000370361 SLF1Q9BQI6 1058 aa19.24■□□□□ 0.67
VMA21-202ENST00000370361 RANBP2P49792 3224 aaKnown RBP19.23■□□□□ 0.67
VMA21-202ENST00000370361 ATP2A1O14983 1001 aa19.23■□□□□ 0.67
VMA21-202ENST00000370361 FDX1P10109 184 aa19.23■□□□□ 0.67
VMA21-202ENST00000370361 CYP2C19P33261 490 aa19.23■□□□□ 0.67
VMA21-202ENST00000370361 HDAC1Q13547 482 aaPredicted RBP19.23■□□□□ 0.67
VMA21-202ENST00000370361 KCTD2Q14681 263 aa19.23■□□□□ 0.67
VMA21-202ENST00000370361 ZMYM1Q5SVZ6 1142 aa19.23■□□□□ 0.67
VMA21-202ENST00000370361 FAM83BQ5T0W9 1011 aa19.23■□□□□ 0.67
VMA21-202ENST00000370361 MSL3Q8N5Y2 521 aaKnown RBP19.23■□□□□ 0.67
VMA21-202ENST00000370361 PRPF38AQ8NAV1 312 aaKnown RBP19.23■□□□□ 0.67
VMA21-202ENST00000370361 MMP19Q99542 508 aa19.23■□□□□ 0.67
VMA21-202ENST00000370361 TEX13BQ9BXU2 312 aa19.23■□□□□ 0.67
VMA21-202ENST00000370361 NAPBQ9H115 298 aa19.23■□□□□ 0.67
VMA21-202ENST00000370361 EPB41L4AQ9HCS5 686 aaPredicted RBP19.23■□□□□ 0.67
VMA21-202ENST00000370361 IGKV6D-41A0A0C4DH26 115 aa19.22■□□□□ 0.67
VMA21-202ENST00000370361 F5H6K3 240 aa19.22■□□□□ 0.67
VMA21-202ENST00000370361 SMIM22K7EJ46 135 aa19.22■□□□□ 0.67
VMA21-202ENST00000370361 M0R2C6 588 aa19.22■□□□□ 0.67
VMA21-202ENST00000370361 RAD21O60216 631 aa19.22■□□□□ 0.67
VMA21-202ENST00000370361 COBLO75128 1261 aa19.22■□□□□ 0.67
VMA21-202ENST00000370361 TTLL1O95922 423 aa19.22■□□□□ 0.67
VMA21-202ENST00000370361 KLRC3Q07444 240 aa19.22■□□□□ 0.67
VMA21-202ENST00000370361 GMCL1P1Q8NEA9 526 aa19.22■□□□□ 0.67
VMA21-202ENST00000370361 MAML3Q96JK9 1138 aa19.22■□□□□ 0.67
VMA21-202ENST00000370361 ZNF214Q9UL59 606 aaPredicted RBP19.22■□□□□ 0.67
VMA21-202ENST00000370361 COL11A1P12107 1806 aaPredicted RBP19.21■□□□□ 0.67
VMA21-202ENST00000370361 GPR153Q6NV75 609 aa19.21■□□□□ 0.67
VMA21-202ENST00000370361 EVI5LQ96CN4 794 aa19.21■□□□□ 0.67
VMA21-202ENST00000370361 MTMR4Q9NYA4 1195 aa19.21■□□□□ 0.67
VMA21-202ENST00000370361 STAP2Q9UGK3 403 aa19.21■□□□□ 0.67
VMA21-202ENST00000370361 FEM1BQ9UK73 627 aa19.21■□□□□ 0.67
VMA21-202ENST00000370361 SALL3Q9BXA9 1300 aa19.21■□□□□ 0.67
VMA21-202ENST00000370361 MYH4Q9Y623 1939 aa19.2■□□□□ 0.66
VMA21-202ENST00000370361 KBTBD13C9JR72 458 aa19.2■□□□□ 0.66
VMA21-202ENST00000370361 NDUFB10O96000 172 aa19.2■□□□□ 0.66
VMA21-202ENST00000370361 TSPY3P0CV98 308 aa19.2■□□□□ 0.66
VMA21-202ENST00000370361 TSPY8P0CW00 308 aa19.2■□□□□ 0.66
VMA21-202ENST00000370361 OAZ1P54368 228 aa19.2■□□□□ 0.66
VMA21-202ENST00000370361 SAMD1Q6SPF0 538 aaPredicted RBP19.2■□□□□ 0.66
VMA21-202ENST00000370361 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.2■□□□□ 0.66
VMA21-202ENST00000370361 REPS2Q8NFH8 660 aa19.2■□□□□ 0.66
VMA21-202ENST00000370361 NEDD1Q8NHV4 660 aa19.2■□□□□ 0.66
VMA21-202ENST00000370361 FBXO28Q9NVF7 368 aa19.2■□□□□ 0.66
VMA21-202ENST00000370361 CLIP2Q9UDT6 1046 aa19.2■□□□□ 0.66
VMA21-202ENST00000370361 CTDP1Q9Y5B0 961 aaPredicted RBP19.2■□□□□ 0.66
VMA21-202ENST00000370361 ZBED4O75132 1171 aa19.19■□□□□ 0.66
VMA21-202ENST00000370361 PPARAQ07869 468 aa19.19■□□□□ 0.66
VMA21-202ENST00000370361 ANKRD45Q5TZF3 282 aa19.19■□□□□ 0.66
VMA21-202ENST00000370361 TRPV1Q8NER1 839 aa19.19■□□□□ 0.66
VMA21-202ENST00000370361 CEP95Q96GE4 821 aa19.19■□□□□ 0.66
VMA21-202ENST00000370361 FBXO40Q9UH90 709 aa19.19■□□□□ 0.66
VMA21-202ENST00000370361 ZMYND8Q9ULU4 1186 aaPredicted RBP19.19■□□□□ 0.66
VMA21-202ENST00000370361 ZNFX1Q9P2E3 1918 aaKnown RBP19.19■□□□□ 0.66
VMA21-202ENST00000370361 LRRC26Q2I0M4 334 aa19.18■□□□□ 0.66
VMA21-202ENST00000370361 ZNF792Q3KQV3 632 aa19.18■□□□□ 0.66
VMA21-202ENST00000370361 TINF2Q9BSI4 451 aa19.18■□□□□ 0.66
VMA21-202ENST00000370361 SENP6Q9GZR1 1112 aaPredicted RBP19.18■□□□□ 0.66
VMA21-202ENST00000370361 HELLSQ9NRZ9 838 aa19.18■□□□□ 0.66
VMA21-202ENST00000370361 SNRNP48Q6IEG0 339 aaKnown RBP19.17■□□□□ 0.66
VMA21-202ENST00000370361 ZNF467Q7Z7K2 595 aaPredicted RBP19.17■□□□□ 0.66
VMA21-202ENST00000370361 TDHQ8IZJ6 230 aa19.17■□□□□ 0.66
VMA21-202ENST00000370361 PRKAG2Q9UGJ0 569 aa19.17■□□□□ 0.66
VMA21-202ENST00000370361 CNPY2Q9Y2B0 182 aa19.17■□□□□ 0.66
VMA21-202ENST00000370361 SYNGAP1Q96PV0 1343 aa19.17■□□□□ 0.66
VMA21-202ENST00000370361 PLXNA1Q9UIW2 1896 aa19.16■□□□□ 0.66
VMA21-202ENST00000370361 RARBP10826 455 aa19.16■□□□□ 0.66
VMA21-202ENST00000370361 MAGEA10P43363 369 aaPredicted RBP19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms