RNA–Protein interactions for RNA: ENST00000367196.3

CTSD-202, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 907 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-202ENST00000367196 COL11A1P12107 1806 aaPredicted RBP17.72■□□□□ 0.43
CTSD-202ENST00000367196 DNM1LO00429 736 aa17.71■□□□□ 0.43
CTSD-202ENST00000367196 SLC3A2P08195 630 aaKnown RBP17.71■□□□□ 0.43
CTSD-202ENST00000367196 CYBAP13498 195 aa17.71■□□□□ 0.43
CTSD-202ENST00000367196 RASA1P20936 1047 aa17.71■□□□□ 0.43
CTSD-202ENST00000367196 CYP2C19P33261 490 aa17.71■□□□□ 0.43
CTSD-202ENST00000367196 BMP8BP34820 402 aa17.71■□□□□ 0.43
CTSD-202ENST00000367196 FSD1Q9BTV5 496 aa17.71■□□□□ 0.43
CTSD-202ENST00000367196 NYAP2Q9P242 653 aa17.71■□□□□ 0.43
CTSD-202ENST00000367196 STAP2Q9UGK3 403 aa17.71■□□□□ 0.43
CTSD-202ENST00000367196 PPP1R9AQ9ULJ8 1098 aa17.71■□□□□ 0.43
CTSD-202ENST00000367196 ZMYND8Q9ULU4 1186 aaPredicted RBP17.71■□□□□ 0.43
CTSD-202ENST00000367196 ADAMTS5Q9UNA0 930 aa17.71■□□□□ 0.43
CTSD-202ENST00000367196 SMIM22K7EJ46 135 aa17.7■□□□□ 0.42
CTSD-202ENST00000367196 KCTD2Q14681 263 aa17.7■□□□□ 0.42
CTSD-202ENST00000367196 TMEM132BQ14DG7 1078 aa17.7■□□□□ 0.42
CTSD-202ENST00000367196 RIOX2Q8IUF8 465 aa17.7■□□□□ 0.42
CTSD-202ENST00000367196 ZNF444Q8N0Y2 327 aaPredicted RBP17.7■□□□□ 0.42
CTSD-202ENST00000367196 ARRDC4Q8NCT1 418 aa17.7■□□□□ 0.42
CTSD-202ENST00000367196 MMP19Q99542 508 aa17.7■□□□□ 0.42
CTSD-202ENST00000367196 SYNPO2Q9UMS6 1093 aa17.7■□□□□ 0.42
CTSD-202ENST00000367196 MYH4Q9Y623 1939 aa17.69■□□□□ 0.42
CTSD-202ENST00000367196 PATL2C9JE40 543 aaKnown RBP17.69■□□□□ 0.42
CTSD-202ENST00000367196 VWA5AO00534 786 aa17.69■□□□□ 0.42
CTSD-202ENST00000367196 IGHA2P01877 340 aa17.69■□□□□ 0.42
CTSD-202ENST00000367196 MX1P20591 662 aa17.69■□□□□ 0.42
CTSD-202ENST00000367196 STAT3P40763 770 aa17.69■□□□□ 0.42
CTSD-202ENST00000367196 RRP1P56182 461 aaKnown RBP17.69■□□□□ 0.42
CTSD-202ENST00000367196 FAM83BQ5T0W9 1011 aa17.69■□□□□ 0.42
CTSD-202ENST00000367196 GDF15Q99988 308 aa17.69■□□□□ 0.42
CTSD-202ENST00000367196 SLF1Q9BQI6 1058 aa17.69■□□□□ 0.42
CTSD-202ENST00000367196 NRBP1Q9UHY1 535 aa17.69■□□□□ 0.42
CTSD-202ENST00000367196 KBTBD13C9JR72 458 aa17.68■□□□□ 0.42
CTSD-202ENST00000367196 SEPT4O43236 478 aa17.68■□□□□ 0.42
CTSD-202ENST00000367196 PDE4BQ07343 736 aa17.68■□□□□ 0.42
CTSD-202ENST00000367196 PPP4R3BQ5MIZ7 849 aa17.68■□□□□ 0.42
CTSD-202ENST00000367196 PI4K2BQ8TCG2 481 aa17.68■□□□□ 0.42
CTSD-202ENST00000367196 MAML3Q96JK9 1138 aa17.68■□□□□ 0.42
CTSD-202ENST00000367196 EPB41L4AQ9HCS5 686 aaPredicted RBP17.68■□□□□ 0.42
CTSD-202ENST00000367196 DIS3Q9Y2L1 958 aaKnown RBP17.68■□□□□ 0.42
CTSD-202ENST00000367196 CTDP1Q9Y5B0 961 aaPredicted RBP17.68■□□□□ 0.42
CTSD-202ENST00000367196 PCDHB15Q9Y5E8 787 aa17.68■□□□□ 0.42
CTSD-202ENST00000367196 ZNFX1Q9P2E3 1918 aaKnown RBP17.68■□□□□ 0.42
CTSD-202ENST00000367196 PLIN4Q96Q06 1357 aa17.67■□□□□ 0.42
CTSD-202ENST00000367196 M0R2C6 588 aa17.67■□□□□ 0.42
CTSD-202ENST00000367196 COBLO75128 1261 aa17.67■□□□□ 0.42
CTSD-202ENST00000367196 SYN1P17600 705 aa17.67■□□□□ 0.42
CTSD-202ENST00000367196 LRRC26Q2I0M4 334 aa17.67■□□□□ 0.42
CTSD-202ENST00000367196 IFNL3Q8IZI9 196 aa17.67■□□□□ 0.42
CTSD-202ENST00000367196 STK11IPQ8N1F8 1099 aa17.67■□□□□ 0.42
CTSD-202ENST00000367196 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.67■□□□□ 0.42
CTSD-202ENST00000367196 TEX13BQ9BXU2 312 aa17.67■□□□□ 0.42
CTSD-202ENST00000367196 SENP6Q9GZR1 1112 aaPredicted RBP17.67■□□□□ 0.42
CTSD-202ENST00000367196 NAPBQ9H115 298 aa17.67■□□□□ 0.42
CTSD-202ENST00000367196 FBXO28Q9NVF7 368 aa17.67■□□□□ 0.42
CTSD-202ENST00000367196 SZT2Q5T011 3432 aa17.67■□□□□ 0.42
CTSD-202ENST00000367196 PLXNA1Q9UIW2 1896 aa17.67■□□□□ 0.42
CTSD-202ENST00000367196 F5H6K3 240 aa17.66■□□□□ 0.42
CTSD-202ENST00000367196 TTLL1O95922 423 aa17.66■□□□□ 0.42
CTSD-202ENST00000367196 NDUFB10O96000 172 aa17.66■□□□□ 0.42
CTSD-202ENST00000367196 TSPY3P0CV98 308 aa17.66■□□□□ 0.42
CTSD-202ENST00000367196 TSPY8P0CW00 308 aa17.66■□□□□ 0.42
CTSD-202ENST00000367196 MAGEA10P43363 369 aaPredicted RBP17.66■□□□□ 0.42
CTSD-202ENST00000367196 KLRC3Q07444 240 aa17.66■□□□□ 0.42
CTSD-202ENST00000367196 PRPF38AQ8NAV1 312 aaKnown RBP17.66■□□□□ 0.42
CTSD-202ENST00000367196 TRPV1Q8NER1 839 aa17.66■□□□□ 0.42
CTSD-202ENST00000367196 CLIP2Q9UDT6 1046 aa17.66■□□□□ 0.42
CTSD-202ENST00000367196 PRKAG2Q9UGJ0 569 aa17.66■□□□□ 0.42
CTSD-202ENST00000367196 ZNF214Q9UL59 606 aaPredicted RBP17.66■□□□□ 0.42
CTSD-202ENST00000367196 LAMA3Q16787 3333 aa17.65■□□□□ 0.42
CTSD-202ENST00000367196 ZBED4O75132 1171 aa17.65■□□□□ 0.42
CTSD-202ENST00000367196 ZMYM1Q5SVZ6 1142 aa17.65■□□□□ 0.42
CTSD-202ENST00000367196 TDHQ8IZJ6 230 aa17.65■□□□□ 0.42
CTSD-202ENST00000367196 UBE2OQ9C0C9 1292 aaKnown RBP17.65■□□□□ 0.42
CTSD-202ENST00000367196 FEM1BQ9UK73 627 aa17.65■□□□□ 0.42
CTSD-202ENST00000367196 IGKV6D-41A0A0C4DH26 115 aa17.64■□□□□ 0.41
CTSD-202ENST00000367196 ATP2A1O14983 1001 aa17.64■□□□□ 0.41
CTSD-202ENST00000367196 PRDM1O75626 825 aa17.64■□□□□ 0.41
CTSD-202ENST00000367196 AAMPQ13685 434 aa17.64■□□□□ 0.41
CTSD-202ENST00000367196 SNRNP48Q6IEG0 339 aaKnown RBP17.64■□□□□ 0.41
CTSD-202ENST00000367196 GPR153Q6NV75 609 aa17.64■□□□□ 0.41
CTSD-202ENST00000367196 MSL3Q8N5Y2 521 aaKnown RBP17.64■□□□□ 0.41
CTSD-202ENST00000367196 GMCL1P1Q8NEA9 526 aa17.64■□□□□ 0.41
CTSD-202ENST00000367196 REPS2Q8NFH8 660 aa17.64■□□□□ 0.41
CTSD-202ENST00000367196 MKL1Q969V6 931 aa17.64■□□□□ 0.41
CTSD-202ENST00000367196 CEP95Q96GE4 821 aa17.64■□□□□ 0.41
CTSD-202ENST00000367196 LBHD1Q9BQE6 289 aaPredicted RBP17.64■□□□□ 0.41
CTSD-202ENST00000367196 TINF2Q9BSI4 451 aa17.64■□□□□ 0.41
CTSD-202ENST00000367196 MTMR4Q9NYA4 1195 aa17.64■□□□□ 0.41
CTSD-202ENST00000367196 FDX1P10109 184 aa17.63■□□□□ 0.41
CTSD-202ENST00000367196 RARBP10826 455 aa17.63■□□□□ 0.41
CTSD-202ENST00000367196 PPARAQ07869 468 aa17.63■□□□□ 0.41
CTSD-202ENST00000367196 GJC2Q5T442 439 aaPredicted RBP17.63■□□□□ 0.41
CTSD-202ENST00000367196 ANKRD45Q5TZF3 282 aa17.63■□□□□ 0.41
CTSD-202ENST00000367196 TICAM2Q86XR7 235 aa17.63■□□□□ 0.41
CTSD-202ENST00000367196 EVI5LQ96CN4 794 aa17.63■□□□□ 0.41
CTSD-202ENST00000367196 NUP88Q99567 741 aaPredicted RBP17.63■□□□□ 0.41
CTSD-202ENST00000367196 FBXO40Q9UH90 709 aa17.63■□□□□ 0.41
CTSD-202ENST00000367196 CNPY2Q9Y2B0 182 aa17.63■□□□□ 0.41
CTSD-202ENST00000367196 MYCNP04198 464 aaPredicted RBP17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms