RNA–Protein interactions for RNA: ENST00000360016.9

BRD4-202, Transcript of bromodomain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene BRD4, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD4-202ENST00000360016 PDCL2Q8N4E4 241 aa23.08■■□□□ 1.29
BRD4-202ENST00000360016 PRDM4Q9UKN5 801 aa23.08■■□□□ 1.29
BRD4-202ENST00000360016 TTF2Q9UNY4 1162 aaKnown RBP23.08■■□□□ 1.29
BRD4-202ENST00000360016 CYTH3O43739 400 aa23.08■■□□□ 1.28
BRD4-202ENST00000360016 BLIDQ8IZY5 108 aa23.08■■□□□ 1.28
BRD4-202ENST00000360016 PDILTQ8N807 584 aa23.08■■□□□ 1.28
BRD4-202ENST00000360016 LZTS2Q9BRK4 669 aa23.08■■□□□ 1.28
BRD4-202ENST00000360016 QSER1Q2KHR3 1735 aa23.07■■□□□ 1.28
BRD4-202ENST00000360016 MXD3Q9BW11 206 aa23.07■■□□□ 1.28
BRD4-202ENST00000360016 ACTN4O43707 911 aaKnown RBP23.07■■□□□ 1.28
BRD4-202ENST00000360016 PTGDRQ13258 359 aa23.07■■□□□ 1.28
BRD4-202ENST00000360016 PICALMQ13492 652 aa23.07■■□□□ 1.28
BRD4-202ENST00000360016 KANK3Q6NY19 840 aa23.07■■□□□ 1.28
BRD4-202ENST00000360016 PCDHA4Q9UN74 947 aa23.07■■□□□ 1.28
BRD4-202ENST00000360016 ATP2C1P98194 919 aaPredicted RBP23.06■■□□□ 1.28
BRD4-202ENST00000360016 ZNF622Q969S3 477 aaKnown RBP eCLIP23.06■■□□□ 1.282e-8■□□□□ 10.3
BRD4-202ENST00000360016 G3V3G9 751 aa23.06■■□□□ 1.28
BRD4-202ENST00000360016 PTPN21Q16825 1174 aa23.06■■□□□ 1.28
BRD4-202ENST00000360016 DCAF8Q5TAQ9 597 aa23.06■■□□□ 1.28
BRD4-202ENST00000360016 CEP95Q96GE4 821 aa23.06■■□□□ 1.28
BRD4-202ENST00000360016 EPSTI1Q96J88 318 aa23.06■■□□□ 1.28
BRD4-202ENST00000360016 KLRF2D3W0D1 207 aa23.05■■□□□ 1.28
BRD4-202ENST00000360016 PRR29P0C7W0 189 aa23.05■■□□□ 1.28
BRD4-202ENST00000360016 GOLGA8HP0CJ92 632 aa23.05■■□□□ 1.28
BRD4-202ENST00000360016 NT5DC1Q5TFE4 455 aa23.05■■□□□ 1.28
BRD4-202ENST00000360016 TYW1BQ6NUM6 668 aa23.05■■□□□ 1.28
BRD4-202ENST00000360016 ZNF771Q7L3S4 317 aaPredicted RBP23.05■■□□□ 1.28
BRD4-202ENST00000360016 TOP1P11387 765 aaKnown RBP23.05■■□□□ 1.28
BRD4-202ENST00000360016 WWC2Q6AWC2 1192 aa23.05■■□□□ 1.28
BRD4-202ENST00000360016 NOVP48745 357 aa23.04■■□□□ 1.28
BRD4-202ENST00000360016 CACTINQ8WUQ7 758 aaKnown RBP23.04■■□□□ 1.28
BRD4-202ENST00000360016 SYMPKQ92797 1274 aaKnown RBP23.04■■□□□ 1.28
BRD4-202ENST00000360016 MAN1B1Q9UKM7 699 aa23.04■■□□□ 1.28
BRD4-202ENST00000360016 BMP6P22004 513 aa23.04■■□□□ 1.28
BRD4-202ENST00000360016 SARSP49591 514 aaKnown RBP23.04■■□□□ 1.28
BRD4-202ENST00000360016 SPZ1Q9BXG8 430 aa23.04■■□□□ 1.28
BRD4-202ENST00000360016 DDX4Q9NQI0 724 aaKnown RBP23.04■■□□□ 1.28
BRD4-202ENST00000360016 A0A087X0B3 334 aa23.04■■□□□ 1.28
BRD4-202ENST00000360016 PARP1P09874 1014 aaKnown RBP23.04■■□□□ 1.28
BRD4-202ENST00000360016 RXRBP28702 533 aa23.04■■□□□ 1.28
BRD4-202ENST00000360016 TERF1P54274 439 aa23.04■■□□□ 1.28
BRD4-202ENST00000360016 GABPAQ06546 454 aa23.04■■□□□ 1.28
BRD4-202ENST00000360016 C2CD5Q86YS7 1000 aa23.04■■□□□ 1.28
BRD4-202ENST00000360016 GRAMD1CQ8IYS0 662 aa23.04■■□□□ 1.28
BRD4-202ENST00000360016 CCDC148Q8NFR7 591 aa23.04■■□□□ 1.28
BRD4-202ENST00000360016 MYRIPQ8NFW9 859 aa23.04■■□□□ 1.28
BRD4-202ENST00000360016 USP40Q9NVE5 1235 aa23.04■■□□□ 1.28
BRD4-202ENST00000360016 BARHL2Q9NY43 387 aa23.04■■□□□ 1.28
BRD4-202ENST00000360016 ERICH4A6NGS2 130 aa23.03■■□□□ 1.28
BRD4-202ENST00000360016 SCNN1DP51172 638 aa23.03■■□□□ 1.28
BRD4-202ENST00000360016 MYL5Q02045 173 aa23.03■■□□□ 1.28
BRD4-202ENST00000360016 RASGRP2Q7LDG7 609 aa23.03■■□□□ 1.28
BRD4-202ENST00000360016 HEATR3Q7Z4Q2 680 aa23.03■■□□□ 1.28
BRD4-202ENST00000360016 SMARCE1Q969G3 411 aa23.03■■□□□ 1.28
BRD4-202ENST00000360016 DHX58Q96C10 678 aa23.03■■□□□ 1.28
BRD4-202ENST00000360016 VWA3AA6NCI4 1184 aa23.03■■□□□ 1.28
BRD4-202ENST00000360016 M0R2N6 131 aa23.03■■□□□ 1.28
BRD4-202ENST00000360016 MCM7P33993 719 aa23.03■■□□□ 1.28
BRD4-202ENST00000360016 HSD3B7Q9H2F3 369 aa23.03■■□□□ 1.28
BRD4-202ENST00000360016 IFNKQ9P0W0 207 aa23.03■■□□□ 1.28
BRD4-202ENST00000360016 STXBP3O00186 592 aa23.03■■□□□ 1.28
BRD4-202ENST00000360016 GALNT17Q6IS24 598 aa23.03■■□□□ 1.28
BRD4-202ENST00000360016 DAGLBQ8NCG7 672 aa23.03■■□□□ 1.28
BRD4-202ENST00000360016 XPO4Q9C0E2 1151 aaKnown RBP23.03■■□□□ 1.28
BRD4-202ENST00000360016 LMOD1P29536 600 aaPredicted RBP23.02■■□□□ 1.28
BRD4-202ENST00000360016 HHIPL2Q6UWX4 724 aa23.02■■□□□ 1.28
BRD4-202ENST00000360016 CCDC94Q9BW85 323 aaPredicted RBP23.02■■□□□ 1.28
BRD4-202ENST00000360016 USP17L2Q6R6M4 530 aa23.02■■□□□ 1.28
BRD4-202ENST00000360016 CCDC34Q96HJ3 373 aa23.02■■□□□ 1.28
BRD4-202ENST00000360016 PLIN4Q96Q06 1357 aa23.01■■□□□ 1.27
BRD4-202ENST00000360016 SMC2O95347 1197 aa23.01■■□□□ 1.27
BRD4-202ENST00000360016 PODNQ7Z5L7 613 aa23.01■■□□□ 1.27
BRD4-202ENST00000360016 LRRC8AQ8IWT6 810 aa23.01■■□□□ 1.27
BRD4-202ENST00000360016 RASGRP4Q8TDF6 673 aa23.01■■□□□ 1.27
BRD4-202ENST00000360016 TEKT1Q969V4 418 aa23.01■■□□□ 1.27
BRD4-202ENST00000360016 CPVLQ9H3G5 476 aa23.01■■□□□ 1.27
BRD4-202ENST00000360016 SLFN14P0C7P3 912 aa23.01■■□□□ 1.27
BRD4-202ENST00000360016 MORC3Q14149 939 aa23.01■■□□□ 1.27
BRD4-202ENST00000360016 FAM177A1Q8N128 213 aaPredicted RBP23.01■■□□□ 1.27
BRD4-202ENST00000360016 SPATA20Q8TB22 786 aa23.01■■□□□ 1.27
BRD4-202ENST00000360016 DBNDD1Q9H9R9 158 aa23.01■■□□□ 1.27
BRD4-202ENST00000360016 PCDHA6Q9UN73 950 aa23.01■■□□□ 1.27
BRD4-202ENST00000360016 PCDHA8Q9Y5H6 950 aa23.01■■□□□ 1.27
BRD4-202ENST00000360016 TNS1Q9HBL0 1735 aaKnown RBP23.01■■□□□ 1.27
BRD4-202ENST00000360016 H0YIN7 160 aa23.01■■□□□ 1.27
BRD4-202ENST00000360016 TPD52L1Q16890 204 aaPredicted RBP23.01■■□□□ 1.27
BRD4-202ENST00000360016 CDC42EP5Q6NZY7 148 aa23.01■■□□□ 1.27
BRD4-202ENST00000360016 TRIML1Q8N9V2 468 aa23.01■■□□□ 1.27
BRD4-202ENST00000360016 TMX1Q9H3N1 280 aa23.01■■□□□ 1.27
BRD4-202ENST00000360016 STYK1Q6J9G0 422 aa23■■□□□ 1.27
BRD4-202ENST00000360016 CCDC194A0A1B0GVG4 234 aa23■■□□□ 1.27
BRD4-202ENST00000360016 NEMFO60524 1076 aa23■■□□□ 1.27
BRD4-202ENST00000360016 SMARCA1P28370 1054 aa23■■□□□ 1.27
BRD4-202ENST00000360016 FANCCQ00597 558 aa23■■□□□ 1.27
BRD4-202ENST00000360016 APOBEC3HQ6NTF7 200 aaKnown RBP23■■□□□ 1.27
BRD4-202ENST00000360016 MTMR4Q9NYA4 1195 aa23■■□□□ 1.27
BRD4-202ENST00000360016 ADAMTSL1Q8N6G6 1762 aa22.99■■□□□ 1.27
BRD4-202ENST00000360016 IL17AQ16552 155 aa22.99■■□□□ 1.27
BRD4-202ENST00000360016 SH3RF1Q7Z6J0 888 aa22.99■■□□□ 1.27
BRD4-202ENST00000360016 C4orf32Q8N8J7 132 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms