RNA–Protein interactions for RNA: ENST00000345662.5

SPAST-202, Transcript of spastin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SPAST, Length 5,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-202ENST00000345662 PPP2R5AQ15172 486 aa19.26■□□□□ 0.67
SPAST-202ENST00000345662 WDR44Q5JSH3 913 aa19.26■□□□□ 0.67
SPAST-202ENST00000345662 NSUN7Q8NE18 718 aaKnown RBP19.26■□□□□ 0.67
SPAST-202ENST00000345662 INTS9Q9NV88 658 aaKnown RBP19.26■□□□□ 0.67
SPAST-202ENST00000345662 EIF3CLB5ME19 914 aaKnown RBP19.26■□□□□ 0.67
SPAST-202ENST00000345662 TAF5LO75529 589 aa19.26■□□□□ 0.67
SPAST-202ENST00000345662 LGSNQ5TDP6 509 aa19.26■□□□□ 0.67
SPAST-202ENST00000345662 SMC1BQ8NDV3 1235 aa19.26■□□□□ 0.67
SPAST-202ENST00000345662 NLRP3Q96P20 1036 aa19.26■□□□□ 0.67
SPAST-202ENST00000345662 PLEKHF1Q96S99 279 aa19.26■□□□□ 0.67
SPAST-202ENST00000345662 KRT12Q99456 494 aa19.26■□□□□ 0.67
SPAST-202ENST00000345662 EIF3CQ99613 913 aaKnown RBP19.26■□□□□ 0.67
SPAST-202ENST00000345662 LARSQ9P2J5 1176 aaKnown RBP19.26■□□□□ 0.67
SPAST-202ENST00000345662 BTBD18B2RXH4 712 aa19.26■□□□□ 0.67
SPAST-202ENST00000345662 TBC1D8O95759 1140 aa19.26■□□□□ 0.67
SPAST-202ENST00000345662 BCRP11274 1271 aa19.26■□□□□ 0.67
SPAST-202ENST00000345662 U2AF1L4Q8WU68 220 aaKnown RBP19.26■□□□□ 0.67
SPAST-202ENST00000345662 NIP7Q9Y221 180 aaKnown RBP eCLIP19.26■□□□□ 0.67
SPAST-202ENST00000345662 ITGA6P23229 1130 aa19.25■□□□□ 0.67
SPAST-202ENST00000345662 ARID5BQ14865 1188 aa19.25■□□□□ 0.67
SPAST-202ENST00000345662 NUF2Q9BZD4 464 aa19.25■□□□□ 0.67
SPAST-202ENST00000345662 DENND2AQ9ULE3 1009 aa19.25■□□□□ 0.67
SPAST-202ENST00000345662 ZNF532Q9HCE3 1301 aa19.25■□□□□ 0.67
SPAST-202ENST00000345662 hCG_1642624A0A1W2PR95 340 aa19.25■□□□□ 0.67
SPAST-202ENST00000345662 NNTQ13423 1086 aa19.25■□□□□ 0.67
SPAST-202ENST00000345662 ZNF654Q8IZM8 581 aa19.25■□□□□ 0.67
SPAST-202ENST00000345662 LINC00301Q8NCQ3 95 aa19.25■□□□□ 0.67
SPAST-202ENST00000345662 IP6K1Q92551 441 aa19.25■□□□□ 0.67
SPAST-202ENST00000345662 IRX5P78411 483 aaPredicted RBP19.25■□□□□ 0.67
SPAST-202ENST00000345662 ALS2CLQ60I27 953 aa19.25■□□□□ 0.67
SPAST-202ENST00000345662 FAM89AQ96GI7 184 aa19.25■□□□□ 0.67
SPAST-202ENST00000345662 VPS37BQ9H9H4 285 aa19.25■□□□□ 0.67
SPAST-202ENST00000345662 TBC1D7Q9P0N9 293 aa19.25■□□□□ 0.67
SPAST-202ENST00000345662 SOWAHDA6NJG2 315 aa19.25■□□□□ 0.67
SPAST-202ENST00000345662 HEXIM1O94992 359 aaKnown RBP19.25■□□□□ 0.67
SPAST-202ENST00000345662 RPN1P04843 607 aaKnown RBP19.25■□□□□ 0.67
SPAST-202ENST00000345662 RFC1P35251 1148 aaPredicted RBP19.25■□□□□ 0.67
SPAST-202ENST00000345662 DZIP3Q86Y13 1208 aaKnown RBP19.25■□□□□ 0.67
SPAST-202ENST00000345662 GBP7Q8N8V2 638 aaPredicted RBP19.25■□□□□ 0.67
SPAST-202ENST00000345662 STAT1P42224 750 aa19.24■□□□□ 0.67
SPAST-202ENST00000345662 CCDC13Q8IYE1 715 aa19.24■□□□□ 0.67
SPAST-202ENST00000345662 PSMD1Q99460 953 aa19.24■□□□□ 0.67
SPAST-202ENST00000345662 EPB41L5Q9HCM4 733 aa19.24■□□□□ 0.67
SPAST-202ENST00000345662 USH1CQ9Y6N9 552 aa19.24■□□□□ 0.67
SPAST-202ENST00000345662 CARMIL3Q8ND23 1372 aa19.24■□□□□ 0.67
SPAST-202ENST00000345662 SESN3P58005 492 aa19.24■□□□□ 0.67
SPAST-202ENST00000345662 PTPN21Q16825 1174 aa19.24■□□□□ 0.67
SPAST-202ENST00000345662 ZNF804AQ7Z570 1209 aa19.24■□□□□ 0.67
SPAST-202ENST00000345662 OPHN1O60890 802 aa19.24■□□□□ 0.67
SPAST-202ENST00000345662 CALCRLQ16602 461 aa19.24■□□□□ 0.67
SPAST-202ENST00000345662 ANKRD13CQ8N6S4 541 aa19.24■□□□□ 0.67
SPAST-202ENST00000345662 ITIH3Q06033 890 aa19.24■□□□□ 0.67
SPAST-202ENST00000345662 PANX2Q96RD6 677 aa19.24■□□□□ 0.67
SPAST-202ENST00000345662 HAUS7Q99871 368 aa19.24■□□□□ 0.67
SPAST-202ENST00000345662 NCKAP5LQ9HCH0 1330 aa19.24■□□□□ 0.67
SPAST-202ENST00000345662 KDM5CP41229 1560 aa19.24■□□□□ 0.67
SPAST-202ENST00000345662 KDM5AP29375 1690 aaKnown RBP19.23■□□□□ 0.67
SPAST-202ENST00000345662 LDHBP07195 334 aaKnown RBP19.23■□□□□ 0.67
SPAST-202ENST00000345662 HMGB2P26583 209 aaKnown RBP19.23■□□□□ 0.67
SPAST-202ENST00000345662 PPP1R21Q6ZMI0 780 aa19.23■□□□□ 0.67
SPAST-202ENST00000345662 ACRBPQ8NEB7 543 aa19.23■□□□□ 0.67
SPAST-202ENST00000345662 ENOX1Q8TC92 643 aaKnown RBP19.23■□□□□ 0.67
SPAST-202ENST00000345662 EHHADHQ08426 723 aa19.23■□□□□ 0.67
SPAST-202ENST00000345662 MAP3K21Q5TCX8 1036 aa19.23■□□□□ 0.67
SPAST-202ENST00000345662 EIF4A1P60842 406 aaKnown RBP19.23■□□□□ 0.67
SPAST-202ENST00000345662 RILPQ96NA2 401 aa19.23■□□□□ 0.67
SPAST-202ENST00000345662 FTOQ9C0B1 505 aaKnown RBP eCLIP19.23■□□□□ 0.67
SPAST-202ENST00000345662 BCAP29Q9UHQ4 241 aa19.23■□□□□ 0.67
SPAST-202ENST00000345662 GCC2Q8IWJ2 1684 aa19.23■□□□□ 0.67
SPAST-202ENST00000345662 GUCY2CP25092 1073 aa19.23■□□□□ 0.67
SPAST-202ENST00000345662 BIRC3Q13489 604 aa19.23■□□□□ 0.67
SPAST-202ENST00000345662 NAA30Q147X3 362 aaPredicted RBP19.23■□□□□ 0.67
SPAST-202ENST00000345662 RESTQ13127 1097 aa19.22■□□□□ 0.67
SPAST-202ENST00000345662 PLA2G4DQ86XP0 818 aa19.22■□□□□ 0.67
SPAST-202ENST00000345662 STK24Q9Y6E0 443 aa19.22■□□□□ 0.67
SPAST-202ENST00000345662 LARGE1O95461 756 aa19.22■□□□□ 0.67
SPAST-202ENST00000345662 MYOCDQ8IZQ8 938 aa19.22■□□□□ 0.67
SPAST-202ENST00000345662 FNBP4Q8N3X1 1017 aaPredicted RBP19.22■□□□□ 0.67
SPAST-202ENST00000345662 SYMPKQ92797 1274 aaKnown RBP19.22■□□□□ 0.67
SPAST-202ENST00000345662 MAST1Q9Y2H9 1570 aa19.22■□□□□ 0.67
SPAST-202ENST00000345662 C2orf54Q08AI8 447 aa19.22■□□□□ 0.67
SPAST-202ENST00000345662 SIRT2Q8IXJ6 389 aa19.22■□□□□ 0.67
SPAST-202ENST00000345662 RETREG2Q8NC44 543 aa19.22■□□□□ 0.67
SPAST-202ENST00000345662 FNBP1Q96RU3 617 aa19.22■□□□□ 0.67
SPAST-202ENST00000345662 LGR6Q9HBX8 967 aa19.22■□□□□ 0.67
SPAST-202ENST00000345662 RNF14Q9UBS8 474 aa19.22■□□□□ 0.67
SPAST-202ENST00000345662 SSX2IPQ9Y2D8 614 aa19.22■□□□□ 0.67
SPAST-202ENST00000345662 PABPN1LA6NDY0 278 aaKnown RBP19.22■□□□□ 0.67
SPAST-202ENST00000345662 GMNNO75496 209 aa19.22■□□□□ 0.67
SPAST-202ENST00000345662 EEF1GP26641 437 aaKnown RBP19.22■□□□□ 0.67
SPAST-202ENST00000345662 WDR78Q5VTH9 848 aa19.22■□□□□ 0.67
SPAST-202ENST00000345662 GLT8D2Q9H1C3 349 aa19.22■□□□□ 0.67
SPAST-202ENST00000345662 ANKRD65E5RJM6 399 aa19.21■□□□□ 0.67
SPAST-202ENST00000345662 CHUKO15111 745 aa19.21■□□□□ 0.67
SPAST-202ENST00000345662 NR1D1P20393 614 aa19.21■□□□□ 0.67
SPAST-202ENST00000345662 ABCB4P21439 1286 aa19.21■□□□□ 0.67
SPAST-202ENST00000345662 IFNAR2P48551 515 aa19.21■□□□□ 0.67
SPAST-202ENST00000345662 KLHL29Q96CT2 875 aa19.21■□□□□ 0.67
SPAST-202ENST00000345662 TUBGCP2Q9BSJ2 902 aa19.21■□□□□ 0.67
SPAST-202ENST00000345662 RABGAP1Q9Y3P9 1069 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms