RNA–Protein interactions for RNA: ENST00000344627.10

SGCA-202, Transcript of sarcoglycan alpha, humanhuman

TSL 1 (best) BASIC

Gene SGCA, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-202ENST00000344627 FLOT1O75955 427 aa14.84□□□□□ -0.03
SGCA-202ENST00000344627 CYBAP13498 195 aa14.84□□□□□ -0.03
SGCA-202ENST00000344627 ADORA2AP29274 412 aa14.84□□□□□ -0.03
SGCA-202ENST00000344627 CNGA1P29973 690 aa14.84□□□□□ -0.03
SGCA-202ENST00000344627 PLS1Q14651 629 aa14.84□□□□□ -0.03
SGCA-202ENST00000344627 FAM109BQ6ICB4 259 aaPredicted RBP14.84□□□□□ -0.03
SGCA-202ENST00000344627 GIMAP6Q6P9H5 292 aa14.84□□□□□ -0.03
SGCA-202ENST00000344627 SENP6Q9GZR1 1112 aaPredicted RBP14.84□□□□□ -0.03
SGCA-202ENST00000344627 ZNF287Q9HBT7 754 aa14.84□□□□□ -0.03
SGCA-202ENST00000344627 GSG1L2A8MUP6 293 aa14.83□□□□□ -0.04
SGCA-202ENST00000344627 KBTBD13C9JR72 458 aa14.83□□□□□ -0.04
SGCA-202ENST00000344627 M0R2C6 588 aa14.83□□□□□ -0.04
SGCA-202ENST00000344627 FCER1AP12319 257 aa14.83□□□□□ -0.04
SGCA-202ENST00000344627 EEF2P13639 858 aaKnown RBP14.83□□□□□ -0.04
SGCA-202ENST00000344627 GNAT2P19087 354 aa14.83□□□□□ -0.04
SGCA-202ENST00000344627 ERCC3P19447 782 aa14.83□□□□□ -0.04
SGCA-202ENST00000344627 MX1P20591 662 aa14.83□□□□□ -0.04
SGCA-202ENST00000344627 LRRC26Q2I0M4 334 aa14.83□□□□□ -0.04
SGCA-202ENST00000344627 KIAA1755Q5JYT7 1200 aa14.83□□□□□ -0.04
SGCA-202ENST00000344627 C1orf53Q5VUE5 145 aa14.83□□□□□ -0.04
SGCA-202ENST00000344627 SLC17A8Q8NDX2 589 aa14.83□□□□□ -0.04
SGCA-202ENST00000344627 GOPCQ9HD26 462 aa14.83□□□□□ -0.04
SGCA-202ENST00000344627 FLRT1Q9NZU1 646 aa14.83□□□□□ -0.04
SGCA-202ENST00000344627 STXBP5LQ9Y2K9 1186 aa14.83□□□□□ -0.04
SGCA-202ENST00000344627 ZNF236Q9UL36 1845 aa14.82□□□□□ -0.04
SGCA-202ENST00000344627 SOX1O00570 391 aaPredicted RBP14.82□□□□□ -0.04
SGCA-202ENST00000344627 SYN1P17600 705 aa14.82□□□□□ -0.04
SGCA-202ENST00000344627 SBK1Q52WX2 424 aa14.82□□□□□ -0.04
SGCA-202ENST00000344627 SIAH1Q8IUQ4 282 aa14.82□□□□□ -0.04
SGCA-202ENST00000344627 ZNF444Q8N0Y2 327 aaPredicted RBP14.82□□□□□ -0.04
SGCA-202ENST00000344627 MSL3Q8N5Y2 521 aaKnown RBP14.82□□□□□ -0.04
SGCA-202ENST00000344627 NPLOC4Q8TAT6 608 aa14.82□□□□□ -0.04
SGCA-202ENST00000344627 LRCH3Q96II8 777 aa14.82□□□□□ -0.04
SGCA-202ENST00000344627 NACAP1Q9BZK3 213 aa14.82□□□□□ -0.04
SGCA-202ENST00000344627 SYNPO2Q9UMS6 1093 aa14.82□□□□□ -0.04
SGCA-202ENST00000344627 ADAMTS5Q9UNA0 930 aa14.82□□□□□ -0.04
SGCA-202ENST00000344627 PATL2C9JE40 543 aaKnown RBP14.81□□□□□ -0.04
SGCA-202ENST00000344627 CYP2C19P33261 490 aa14.81□□□□□ -0.04
SGCA-202ENST00000344627 NCAPG2Q86XI2 1143 aa14.81□□□□□ -0.04
SGCA-202ENST00000344627 RIOX2Q8IUF8 465 aa14.81□□□□□ -0.04
SGCA-202ENST00000344627 DEFB123Q8N688 67 aa14.81□□□□□ -0.04
SGCA-202ENST00000344627 PI4K2BQ8TCG2 481 aa14.81□□□□□ -0.04
SGCA-202ENST00000344627 SEC62Q99442 399 aaKnown RBP14.81□□□□□ -0.04
SGCA-202ENST00000344627 LAMA3Q16787 3333 aa14.81□□□□□ -0.04
SGCA-202ENST00000344627 KCTD2Q14681 263 aa14.8□□□□□ -0.04
SGCA-202ENST00000344627 ATG4CQ96DT6 458 aa14.8□□□□□ -0.04
SGCA-202ENST00000344627 MAML3Q96JK9 1138 aa14.8□□□□□ -0.04
SGCA-202ENST00000344627 PRDM1O75626 825 aa14.79□□□□□ -0.04
SGCA-202ENST00000344627 SLC3A2P08195 630 aaKnown RBP14.79□□□□□ -0.04
SGCA-202ENST00000344627 RASA1P20936 1047 aa14.79□□□□□ -0.04
SGCA-202ENST00000344627 SNX17Q15036 470 aa14.79□□□□□ -0.04
SGCA-202ENST00000344627 FAM83BQ5T0W9 1011 aa14.79□□□□□ -0.04
SGCA-202ENST00000344627 SLC39A5Q6ZMH5 540 aa14.79□□□□□ -0.04
SGCA-202ENST00000344627 RNF180Q86T96 592 aa14.79□□□□□ -0.04
SGCA-202ENST00000344627 IFNL3Q8IZI9 196 aa14.79□□□□□ -0.04
SGCA-202ENST00000344627 ROBO3Q96MS0 1386 aa14.79□□□□□ -0.04
SGCA-202ENST00000344627 NAPBQ9H115 298 aa14.79□□□□□ -0.04
SGCA-202ENST00000344627 EPB41L4AQ9HCS5 686 aaPredicted RBP14.79□□□□□ -0.04
SGCA-202ENST00000344627 CLIP2Q9UDT6 1046 aa14.79□□□□□ -0.04
SGCA-202ENST00000344627 RLFQ13129 1914 aa14.78□□□□□ -0.04
SGCA-202ENST00000344627 ZNFX1Q9P2E3 1918 aaKnown RBP14.78□□□□□ -0.04
SGCA-202ENST00000344627 MYH4Q9Y623 1939 aa14.78□□□□□ -0.04
SGCA-202ENST00000344627 FDX1P10109 184 aa14.78□□□□□ -0.04
SGCA-202ENST00000344627 RARBP10826 455 aa14.78□□□□□ -0.04
SGCA-202ENST00000344627 STAT3P40763 770 aa14.78□□□□□ -0.04
SGCA-202ENST00000344627 RTP1P59025 263 aa14.78□□□□□ -0.04
SGCA-202ENST00000344627 HDAC1Q13547 482 aaPredicted RBP14.78□□□□□ -0.04
SGCA-202ENST00000344627 PPP4R3BQ5MIZ7 849 aa14.78□□□□□ -0.04
SGCA-202ENST00000344627 B4GALNT3Q6L9W6 998 aa14.78□□□□□ -0.04
SGCA-202ENST00000344627 MMP19Q99542 508 aa14.78□□□□□ -0.04
SGCA-202ENST00000344627 FBXO28Q9NVF7 368 aa14.78□□□□□ -0.04
SGCA-202ENST00000344627 MTMR10Q9NXD2 777 aa14.78□□□□□ -0.04
SGCA-202ENST00000344627 NYAP2Q9P242 653 aa14.78□□□□□ -0.04
SGCA-202ENST00000344627 PPP1R9AQ9ULJ8 1098 aa14.78□□□□□ -0.04
SGCA-202ENST00000344627 ISY1Q9ULR0 285 aaKnown RBP14.78□□□□□ -0.04
SGCA-202ENST00000344627 CTDP1Q9Y5B0 961 aaPredicted RBP14.78□□□□□ -0.04
SGCA-202ENST00000344627 COL11A1P12107 1806 aaPredicted RBP14.78□□□□□ -0.04
SGCA-202ENST00000344627 ALPK3Q96L96 1907 aa14.77□□□□□ -0.04
SGCA-202ENST00000344627 VWA5AO00534 786 aa14.77□□□□□ -0.05
SGCA-202ENST00000344627 COBLO75128 1261 aa14.77□□□□□ -0.05
SGCA-202ENST00000344627 SLC4A3P48751 1232 aa14.77□□□□□ -0.05
SGCA-202ENST00000344627 MDM2Q00987 491 aaPredicted RBP14.77□□□□□ -0.05
SGCA-202ENST00000344627 PDE4BQ07343 736 aa14.77□□□□□ -0.05
SGCA-202ENST00000344627 TMEM132BQ14DG7 1078 aa14.77□□□□□ -0.05
SGCA-202ENST00000344627 ZMYM1Q5SVZ6 1142 aa14.77□□□□□ -0.05
SGCA-202ENST00000344627 CCDC129Q6ZRS4 1044 aa14.77□□□□□ -0.05
SGCA-202ENST00000344627 TRPV1Q8NER1 839 aa14.77□□□□□ -0.05
SGCA-202ENST00000344627 NUP88Q99567 741 aaPredicted RBP14.77□□□□□ -0.05
SGCA-202ENST00000344627 TINF2Q9BSI4 451 aa14.77□□□□□ -0.05
SGCA-202ENST00000344627 TSEN34Q9BSV6 310 aaKnown RBP14.77□□□□□ -0.05
SGCA-202ENST00000344627 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.77□□□□□ -0.05
SGCA-202ENST00000344627 LNPKQ9C0E8 428 aa14.77□□□□□ -0.05
SGCA-202ENST00000344627 RWDD1Q9H446 243 aaPredicted RBP14.77□□□□□ -0.05
SGCA-202ENST00000344627 A0A0G2JMZ2 1700 aa14.76□□□□□ -0.05
SGCA-202ENST00000344627 POTEB2H3BUK9 544 aa14.76□□□□□ -0.05
SGCA-202ENST00000344627 ATP2A1O14983 1001 aa14.76□□□□□ -0.05
SGCA-202ENST00000344627 TSPY3P0CV98 308 aa14.76□□□□□ -0.05
SGCA-202ENST00000344627 TSPY8P0CW00 308 aa14.76□□□□□ -0.05
SGCA-202ENST00000344627 AKR1A1P14550 325 aa14.76□□□□□ -0.05
SGCA-202ENST00000344627 PDE1AP54750 535 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms