RNA–Protein interactions for RNA: ENST00000344548.7

CDC42-202, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC42, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-202ENST00000344548 ERCC4Q92889 916 aaPredicted RBP15.64■□□□□ 0.09
CDC42-202ENST00000344548 CSRNP1Q96S65 589 aa15.64■□□□□ 0.09
CDC42-202ENST00000344548 WNT10BO00744 389 aa15.63■□□□□ 0.09
CDC42-202ENST00000344548 KRT2P35908 639 aa15.63■□□□□ 0.09
CDC42-202ENST00000344548 SEPT2Q15019 361 aa15.63■□□□□ 0.09
CDC42-202ENST00000344548 METTL16Q86W50 562 aaKnown RBP15.63■□□□□ 0.09
CDC42-202ENST00000344548 HOMER1Q86YM7 354 aa15.63■□□□□ 0.09
CDC42-202ENST00000344548 AGBL3Q8NEM8 1001 aa15.63■□□□□ 0.09
CDC42-202ENST00000344548 JDP2Q8WYK2 163 aa15.63■□□□□ 0.09
CDC42-202ENST00000344548 TMEM39BQ9GZU3 492 aa15.63■□□□□ 0.09
CDC42-202ENST00000344548 TSPY26PQ9H489 355 aa15.63■□□□□ 0.09
CDC42-202ENST00000344548 CLSTN2Q9H4D0 955 aa15.63■□□□□ 0.09
CDC42-202ENST00000344548 SNHG28P0DPA3 235 aa15.63■□□□□ 0.09
CDC42-202ENST00000344548 NLRP5P59047 1200 aa15.63■□□□□ 0.09
CDC42-202ENST00000344548 SPDYE2Q495Y8 402 aa15.63■□□□□ 0.09
CDC42-202ENST00000344548 SPECC1Q5M775 1068 aa15.63■□□□□ 0.09
CDC42-202ENST00000344548 SHC4Q6S5L8 630 aa15.63■□□□□ 0.09
CDC42-202ENST00000344548 FOXP4Q8IVH2 680 aaPredicted RBP15.63■□□□□ 0.09
CDC42-202ENST00000344548 FMR1NBQ8N0W7 255 aaPredicted RBP15.63■□□□□ 0.09
CDC42-202ENST00000344548 ZBED3Q96IU2 234 aaPredicted RBP15.63■□□□□ 0.09
CDC42-202ENST00000344548 PIGSQ96S52 555 aa15.63■□□□□ 0.09
CDC42-202ENST00000344548 VEZTQ9HBM0 779 aa15.63■□□□□ 0.09
CDC42-202ENST00000344548 GPCPD1Q9NPB8 672 aa15.63■□□□□ 0.09
CDC42-202ENST00000344548 A0A087WWV3 80 aa15.62■□□□□ 0.09
CDC42-202ENST00000344548 EEF2P13639 858 aaKnown RBP15.62■□□□□ 0.09
CDC42-202ENST00000344548 XBP1P17861 261 aa15.62■□□□□ 0.09
CDC42-202ENST00000344548 RBM26Q5T8P6 1007 aaKnown RBP15.62■□□□□ 0.09
CDC42-202ENST00000344548 TNMDQ9H2S6 317 aa15.62■□□□□ 0.09
CDC42-202ENST00000344548 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.62■□□□□ 0.09
CDC42-202ENST00000344548 HDAC9Q9UKV0 1011 aa15.62■□□□□ 0.09
CDC42-202ENST00000344548 ASTN2O75129 1339 aaPredicted RBP15.62■□□□□ 0.09
CDC42-202ENST00000344548 STXBP3O00186 592 aa15.61■□□□□ 0.09
CDC42-202ENST00000344548 GNAQP50148 359 aa15.61■□□□□ 0.09
CDC42-202ENST00000344548 HEATR3Q7Z4Q2 680 aa15.61■□□□□ 0.09
CDC42-202ENST00000344548 SPZ1Q9BXG8 430 aa15.61■□□□□ 0.09
CDC42-202ENST00000344548 DDX19AQ9NUU7 478 aaKnown RBP15.61■□□□□ 0.09
CDC42-202ENST00000344548 MYH4Q9Y623 1939 aa15.61■□□□□ 0.09
CDC42-202ENST00000344548 A0A1W2PQ27 194 aa15.61■□□□□ 0.09
CDC42-202ENST00000344548 A0A1W2PQ64 194 aa15.61■□□□□ 0.09
CDC42-202ENST00000344548 A0A1W2PQD8 194 aa15.61■□□□□ 0.09
CDC42-202ENST00000344548 SLC16A2P36021 539 aa15.61■□□□□ 0.09
CDC42-202ENST00000344548 RILPL1Q5EBL4 403 aa15.61■□□□□ 0.09
CDC42-202ENST00000344548 RBM43Q6ZSC3 357 aaKnown RBP15.61■□□□□ 0.09
CDC42-202ENST00000344548 KCTD1Q719H9 257 aa15.61■□□□□ 0.09
CDC42-202ENST00000344548 MRPS27Q92552 414 aaKnown RBP15.61■□□□□ 0.09
CDC42-202ENST00000344548 CCDC17Q96LX7 622 aa15.61■□□□□ 0.09
CDC42-202ENST00000344548 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.61■□□□□ 0.09
CDC42-202ENST00000344548 GH2P01242 217 aa15.6■□□□□ 0.09
CDC42-202ENST00000344548 FAM160A1Q05DH4 1040 aa15.6■□□□□ 0.09
CDC42-202ENST00000344548 PIK3AP1Q6ZUJ8 805 aa15.6■□□□□ 0.09
CDC42-202ENST00000344548 MIGA2Q7L4E1 593 aa15.6■□□□□ 0.09
CDC42-202ENST00000344548 FAM151AQ8WW52 585 aa15.6■□□□□ 0.09
CDC42-202ENST00000344548 RIOX1Q9H6W3 641 aa15.6■□□□□ 0.09
CDC42-202ENST00000344548 MYOZ2Q9NPC6 264 aa15.6■□□□□ 0.09
CDC42-202ENST00000344548 PGAP2Q9UHJ9 254 aa15.6■□□□□ 0.09
CDC42-202ENST00000344548 M0R2N6 131 aa15.6■□□□□ 0.09
CDC42-202ENST00000344548 PPP6R2O75170 966 aa15.6■□□□□ 0.09
CDC42-202ENST00000344548 ZNF543Q08ER8 600 aa15.6■□□□□ 0.09
CDC42-202ENST00000344548 MAP3K11Q16584 847 aa15.6■□□□□ 0.09
CDC42-202ENST00000344548 SAMD7Q7Z3H4 446 aa15.6■□□□□ 0.09
CDC42-202ENST00000344548 MTMR14Q8NCE2 650 aa15.6■□□□□ 0.09
CDC42-202ENST00000344548 BARHL2Q9NY43 387 aa15.6■□□□□ 0.09
CDC42-202ENST00000344548 A0A1W2PRG0 241 aa15.59■□□□□ 0.09
CDC42-202ENST00000344548 PFKFB1P16118 471 aa15.59■□□□□ 0.09
CDC42-202ENST00000344548 CCDC73Q6ZRK6 1079 aa15.59■□□□□ 0.09
CDC42-202ENST00000344548 FBXO2Q9UK22 296 aaPredicted RBP15.59■□□□□ 0.09
CDC42-202ENST00000344548 RAD21O60216 631 aa15.59■□□□□ 0.09
CDC42-202ENST00000344548 PPP1R11O60927 126 aaPredicted RBP15.59■□□□□ 0.09
CDC42-202ENST00000344548 LETM1O95202 739 aaPredicted RBP15.59■□□□□ 0.09
CDC42-202ENST00000344548 CMA1P23946 247 aa15.59■□□□□ 0.09
CDC42-202ENST00000344548 ZNF174Q15697 407 aa15.59■□□□□ 0.09
CDC42-202ENST00000344548 ABCB5Q2M3G0 1257 aa15.59■□□□□ 0.09
CDC42-202ENST00000344548 USP49Q70CQ1 688 aa15.59■□□□□ 0.09
CDC42-202ENST00000344548 BLIDQ8IZY5 108 aa15.59■□□□□ 0.09
CDC42-202ENST00000344548 TRIM34Q9BYJ4 488 aa15.59■□□□□ 0.09
CDC42-202ENST00000344548 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.59■□□□□ 0.09
CDC42-202ENST00000344548 TMOD2Q9NZR1 351 aa15.59■□□□□ 0.09
CDC42-202ENST00000344548 GJA3Q9Y6H8 435 aa15.59■□□□□ 0.09
CDC42-202ENST00000344548 ZNF541Q9H0D2 1346 aa15.59■□□□□ 0.09
CDC42-202ENST00000344548 FZD9O00144 591 aa15.58■□□□□ 0.08
CDC42-202ENST00000344548 GMPSP49915 693 aaPredicted RBP15.58■□□□□ 0.08
CDC42-202ENST00000344548 COA7Q96BR5 231 aa15.58■□□□□ 0.08
CDC42-202ENST00000344548 NUP88Q99567 741 aaPredicted RBP15.58■□□□□ 0.08
CDC42-202ENST00000344548 LZTS2Q9BRK4 669 aa15.58■□□□□ 0.08
CDC42-202ENST00000344548 KANSL2Q9H9L4 492 aa15.58■□□□□ 0.08
CDC42-202ENST00000344548 JMJD4Q9H9V9 463 aa15.58■□□□□ 0.08
CDC42-202ENST00000344548 PCDHA4Q9UN74 947 aa15.58■□□□□ 0.08
CDC42-202ENST00000344548 COL2A1P02458 1487 aaPredicted RBP15.58■□□□□ 0.08
CDC42-202ENST00000344548 LTBP3Q9NS15 1303 aa15.57■□□□□ 0.08
CDC42-202ENST00000344548 ICA1Q05084 483 aa15.57■□□□□ 0.08
CDC42-202ENST00000344548 ADGRF4Q8IZF3 695 aa15.57■□□□□ 0.08
CDC42-202ENST00000344548 MKL1Q969V6 931 aa15.57■□□□□ 0.08
CDC42-202ENST00000344548 SH3GLB2Q9NR46 395 aa15.57■□□□□ 0.08
CDC42-202ENST00000344548 PCDHA6Q9UN73 950 aa15.57■□□□□ 0.08
CDC42-202ENST00000344548 HPSEQ9Y251 543 aa15.57■□□□□ 0.08
CDC42-202ENST00000344548 PCDHA8Q9Y5H6 950 aa15.57■□□□□ 0.08
CDC42-202ENST00000344548 ZNF202O95125 648 aa15.57■□□□□ 0.08
CDC42-202ENST00000344548 PTPREP23469 700 aa15.57■□□□□ 0.08
CDC42-202ENST00000344548 ECE1P42892 770 aa15.57■□□□□ 0.08
CDC42-202ENST00000344548 TYRO3Q06418 890 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms