RNA–Protein interactions for RNA: ENST00000342740.5

CARMIL3-201, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CARMIL3, Length 4,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-201ENST00000342740 NR5A1Q13285 461 aa17.42■□□□□ 0.38
CARMIL3-201ENST00000342740 LINC00301Q8NCQ3 95 aa17.42■□□□□ 0.38
CARMIL3-201ENST00000342740 SYMPKQ92797 1274 aaKnown RBP17.42■□□□□ 0.38
CARMIL3-201ENST00000342740 IFT74Q96LB3 600 aa17.42■□□□□ 0.38
CARMIL3-201ENST00000342740 RHOXF2Q9BQY4 288 aa17.42■□□□□ 0.38
CARMIL3-201ENST00000342740 GPATCH4Q5T3I0 446 aaKnown RBP17.41■□□□□ 0.38
CARMIL3-201ENST00000342740 MRPL44Q9H9J2 332 aaKnown RBP17.41■□□□□ 0.38
CARMIL3-201ENST00000342740 HSF2BPO75031 334 aa17.41■□□□□ 0.38
CARMIL3-201ENST00000342740 GCNT3O95395 438 aa17.41■□□□□ 0.38
CARMIL3-201ENST00000342740 DYNLL2Q96FJ2 89 aa17.41■□□□□ 0.38
CARMIL3-201ENST00000342740 AIFM3Q96NN9 605 aa17.41■□□□□ 0.38
CARMIL3-201ENST00000342740 FANCLQ9NW38 375 aa17.41■□□□□ 0.38
CARMIL3-201ENST00000342740 PPP6R2O75170 966 aa17.41■□□□□ 0.38
CARMIL3-201ENST00000342740 EEF2P13639 858 aaKnown RBP17.41■□□□□ 0.38
CARMIL3-201ENST00000342740 MCTP2Q6DN12 878 aa17.41■□□□□ 0.38
CARMIL3-201ENST00000342740 TSGA10Q9BZW7 698 aa17.41■□□□□ 0.38
CARMIL3-201ENST00000342740 COL15A1P39059 1388 aa17.4■□□□□ 0.38
CARMIL3-201ENST00000342740 CELF1Q92879 486 aaKnown RBP17.4■□□□□ 0.38
CARMIL3-201ENST00000342740 VTI1AQ96AJ9 217 aa17.4■□□□□ 0.38
CARMIL3-201ENST00000342740 GJC1P36383 396 aa17.4■□□□□ 0.38
CARMIL3-201ENST00000342740 TRAPPC10P48553 1259 aa17.4■□□□□ 0.38
CARMIL3-201ENST00000342740 MAP2K1Q02750 393 aaPredicted RBP17.4■□□□□ 0.38
CARMIL3-201ENST00000342740 RASGRP4Q8TDF6 673 aa17.4■□□□□ 0.38
CARMIL3-201ENST00000342740 GPR101Q96P66 508 aaPredicted RBP17.4■□□□□ 0.38
CARMIL3-201ENST00000342740 CSRNP2Q9H175 543 aa17.4■□□□□ 0.38
CARMIL3-201ENST00000342740 EXOC3O60645 756 aa17.4■□□□□ 0.38
CARMIL3-201ENST00000342740 EZRP15311 586 aaKnown RBP17.4■□□□□ 0.38
CARMIL3-201ENST00000342740 LONP1P36776 959 aaKnown RBP17.4■□□□□ 0.38
CARMIL3-201ENST00000342740 RABL6Q3YEC7 729 aaPredicted RBP17.4■□□□□ 0.38
CARMIL3-201ENST00000342740 DPH6Q7L8W6 267 aa17.4■□□□□ 0.38
CARMIL3-201ENST00000342740 CSRNP1Q96S65 589 aa17.4■□□□□ 0.38
CARMIL3-201ENST00000342740 SWAP70Q9UH65 585 aa17.4■□□□□ 0.38
CARMIL3-201ENST00000342740 KDM3AQ9Y4C1 1321 aa17.4■□□□□ 0.38
CARMIL3-201ENST00000342740 CLRN2A0PK11 232 aa17.4■□□□□ 0.38
CARMIL3-201ENST00000342740 GTPBP6O43824 516 aaPredicted RBP17.4■□□□□ 0.38
CARMIL3-201ENST00000342740 MMP10P09238 476 aa17.4■□□□□ 0.38
CARMIL3-201ENST00000342740 ALAS1P13196 640 aa17.4■□□□□ 0.38
CARMIL3-201ENST00000342740 TOB2Q14106 344 aaPredicted RBP17.4■□□□□ 0.38
CARMIL3-201ENST00000342740 NRXN1Q9ULB1 1477 aa17.39■□□□□ 0.37
CARMIL3-201ENST00000342740 MMP1P03956 469 aa17.39■□□□□ 0.37
CARMIL3-201ENST00000342740 LMAN1P49257 510 aa17.39■□□□□ 0.37
CARMIL3-201ENST00000342740 SLC9C1Q4G0N8 1177 aa17.39■□□□□ 0.37
CARMIL3-201ENST00000342740 TTLL1O95922 423 aa17.39■□□□□ 0.37
CARMIL3-201ENST00000342740 GTF2F1P35269 517 aaKnown RBP eCLIP17.39■□□□□ 0.37
CARMIL3-201ENST00000342740 ASPRV1Q53RT3 343 aa17.39■□□□□ 0.37
CARMIL3-201ENST00000342740 PRDX5P30044 214 aa17.39■□□□□ 0.37
CARMIL3-201ENST00000342740 ADKP55263 362 aaKnown RBP17.39■□□□□ 0.37
CARMIL3-201ENST00000342740 EVCP57679 992 aa17.39■□□□□ 0.37
CARMIL3-201ENST00000342740 RESTQ13127 1097 aa17.39■□□□□ 0.37
CARMIL3-201ENST00000342740 GPBP1Q86WP2 473 aa17.39■□□□□ 0.37
CARMIL3-201ENST00000342740 EXOC7Q9UPT5 735 aa17.39■□□□□ 0.37
CARMIL3-201ENST00000342740 MRPL11Q9Y3B7 192 aaKnown RBP17.39■□□□□ 0.37
CARMIL3-201ENST00000342740 NOP56O00567 594 aaKnown RBP17.38■□□□□ 0.37
CARMIL3-201ENST00000342740 CC2D2BQ6DHV5 1058 aa17.38■□□□□ 0.37
CARMIL3-201ENST00000342740 GPIHBP1Q8IV16 184 aa17.38■□□□□ 0.37
CARMIL3-201ENST00000342740 ERO1AQ96HE7 468 aa17.38■□□□□ 0.37
CARMIL3-201ENST00000342740 DNAJC5Q9H3Z4 198 aa17.38■□□□□ 0.37
CARMIL3-201ENST00000342740 FAM207AQ9NSI2 230 aaPredicted RBP17.38■□□□□ 0.37
CARMIL3-201ENST00000342740 DDX25Q9UHL0 483 aaKnown RBP17.38■□□□□ 0.37
CARMIL3-201ENST00000342740 WDR44Q5JSH3 913 aa17.38■□□□□ 0.37
CARMIL3-201ENST00000342740 TBC1D9BQ66K14 1250 aa17.38■□□□□ 0.37
CARMIL3-201ENST00000342740 NAPGQ99747 312 aaPredicted RBP17.38■□□□□ 0.37
CARMIL3-201ENST00000342740 AMNQ9BXJ7 453 aa17.38■□□□□ 0.37
CARMIL3-201ENST00000342740 CEP83Q9Y592 693 aa17.38■□□□□ 0.37
CARMIL3-201ENST00000342740 TNFAIP3P21580 790 aa17.38■□□□□ 0.37
CARMIL3-201ENST00000342740 MAGEA1P43355 309 aa17.38■□□□□ 0.37
CARMIL3-201ENST00000342740 SPICE1Q8N0Z3 855 aa17.38■□□□□ 0.37
CARMIL3-201ENST00000342740 IVNS1ABPQ9Y6Y0 642 aa17.38■□□□□ 0.37
CARMIL3-201ENST00000342740 TUBBP07437 444 aa17.38■□□□□ 0.37
CARMIL3-201ENST00000342740 POLR2MP0CAP2 368 aa17.38■□□□□ 0.37
CARMIL3-201ENST00000342740 NLRX1Q86UT6 975 aa17.38■□□□□ 0.37
CARMIL3-201ENST00000342740 MRFAP1L1Q96HT8 127 aa17.38■□□□□ 0.37
CARMIL3-201ENST00000342740 RASAL2Q9UJF2 1139 aa17.38■□□□□ 0.37
CARMIL3-201ENST00000342740 PCDHA4Q9UN74 947 aa17.38■□□□□ 0.37
CARMIL3-201ENST00000342740 FSD2A1L4K1 749 aa17.37■□□□□ 0.37
CARMIL3-201ENST00000342740 RIOK3O14730 519 aaKnown RBP17.37■□□□□ 0.37
CARMIL3-201ENST00000342740 DCAF15Q66K64 600 aa17.37■□□□□ 0.37
CARMIL3-201ENST00000342740 MYOCDQ8IZQ8 938 aa17.37■□□□□ 0.37
CARMIL3-201ENST00000342740 ARHGEF1Q92888 912 aaKnown RBP17.37■□□□□ 0.37
CARMIL3-201ENST00000342740 SLF1Q9BQI6 1058 aa17.37■□□□□ 0.37
CARMIL3-201ENST00000342740 BRIP1Q9BX63 1249 aa17.37■□□□□ 0.37
CARMIL3-201ENST00000342740 KANSL2Q9H9L4 492 aa17.37■□□□□ 0.37
CARMIL3-201ENST00000342740 NPR1P16066 1061 aa17.37■□□□□ 0.37
CARMIL3-201ENST00000342740 PLCB3Q01970 1234 aa17.37■□□□□ 0.37
CARMIL3-201ENST00000342740 LRMPQ12912 555 aa17.37■□□□□ 0.37
CARMIL3-201ENST00000342740 JAKMIP2Q96AA8 810 aa17.37■□□□□ 0.37
CARMIL3-201ENST00000342740 AFF2P51816 1311 aa17.37■□□□□ 0.37
CARMIL3-201ENST00000342740 RPAP1Q9BWH6 1393 aaPredicted RBP17.37■□□□□ 0.37
CARMIL3-201ENST00000342740 KCNJ18B7U540 433 aa17.37■□□□□ 0.37
CARMIL3-201ENST00000342740 IRX3P78415 501 aaPredicted RBP17.37■□□□□ 0.37
CARMIL3-201ENST00000342740 MORC3Q14149 939 aa17.37■□□□□ 0.37
CARMIL3-201ENST00000342740 KCNJ12Q14500 433 aa17.37■□□□□ 0.37
CARMIL3-201ENST00000342740 ASIC2Q16515 512 aa17.37■□□□□ 0.37
CARMIL3-201ENST00000342740 ATP6V0A2Q9Y487 856 aa17.37■□□□□ 0.37
CARMIL3-201ENST00000342740 RIMBP3CA6NJZ7 1639 aa17.37■□□□□ 0.37
CARMIL3-201ENST00000342740 RIMBP3BA6NNM3 1639 aa17.37■□□□□ 0.37
CARMIL3-201ENST00000342740 RIMBP3Q9UFD9 1639 aa17.37■□□□□ 0.37
CARMIL3-201ENST00000342740 KRT5P13647 590 aa17.37■□□□□ 0.37
CARMIL3-201ENST00000342740 VAV2P52735 878 aa17.37■□□□□ 0.37
CARMIL3-201ENST00000342740 PPP2R3AQ06190 1150 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms