RNA–Protein interactions for RNA: ENST00000339711.8

PRDM8-201, Transcript of PR/SET domain 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM8, Length 4,095 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM8-201ENST00000339711 TAF3Q5VWG9 929 aa18.58■□□□□ 0.56
PRDM8-201ENST00000339711 FMR1NBQ8N0W7 255 aaPredicted RBP18.58■□□□□ 0.56
PRDM8-201ENST00000339711 TMEM47Q9BQJ4 181 aa18.58■□□□□ 0.56
PRDM8-201ENST00000339711 LRRC4BQ9NT99 713 aa18.58■□□□□ 0.56
PRDM8-201ENST00000339711 CWC15Q9P013 229 aaKnown RBP18.58■□□□□ 0.56
PRDM8-201ENST00000339711 SPDYE3A6NKU9 549 aa18.58■□□□□ 0.56
PRDM8-201ENST00000339711 PAXBP1Q9Y5B6 917 aa18.58■□□□□ 0.56
PRDM8-201ENST00000339711 TRAF1Q13077 416 aa18.57■□□□□ 0.56
PRDM8-201ENST00000339711 ZNF827Q17R98 1081 aa18.57■□□□□ 0.56
PRDM8-201ENST00000339711 KARSQ15046 597 aaKnown RBP18.57■□□□□ 0.56
PRDM8-201ENST00000339711 GALNT17Q6IS24 598 aa18.57■□□□□ 0.56
PRDM8-201ENST00000339711 SYMPKQ92797 1274 aaKnown RBP18.57■□□□□ 0.56
PRDM8-201ENST00000339711 MTIF2P46199 727 aaKnown RBP18.57■□□□□ 0.56
PRDM8-201ENST00000339711 TRAPPC10P48553 1259 aa18.57■□□□□ 0.56
PRDM8-201ENST00000339711 SPAG1Q07617 926 aa18.57■□□□□ 0.56
PRDM8-201ENST00000339711 PODNQ7Z5L7 613 aa18.57■□□□□ 0.56
PRDM8-201ENST00000339711 CCDC17Q96LX7 622 aa18.57■□□□□ 0.56
PRDM8-201ENST00000339711 MAPK8IP1Q9UQF2 711 aa18.57■□□□□ 0.56
PRDM8-201ENST00000339711 PHLPP1O60346 1717 aa18.57■□□□□ 0.56
PRDM8-201ENST00000339711 PCDHA4Q9UN74 947 aa18.56■□□□□ 0.56
PRDM8-201ENST00000339711 SETQ01105 290 aaPredicted RBP18.56■□□□□ 0.56
PRDM8-201ENST00000339711 LONRF3Q496Y0 759 aa18.56■□□□□ 0.56
PRDM8-201ENST00000339711 TRMT44Q8IYL2 757 aaKnown RBP18.56■□□□□ 0.56
PRDM8-201ENST00000339711 CTAGE1Q96RT6 745 aa18.56■□□□□ 0.56
PRDM8-201ENST00000339711 SWAP70Q9UH65 585 aa18.56■□□□□ 0.56
PRDM8-201ENST00000339711 XPO4Q9C0E2 1151 aaKnown RBP18.56■□□□□ 0.56
PRDM8-201ENST00000339711 SRPRBQ9Y5M8 271 aaKnown RBP18.56■□□□□ 0.56
PRDM8-201ENST00000339711 C5P01031 1676 aa18.56■□□□□ 0.56
PRDM8-201ENST00000339711 EIF3JO75822 258 aaKnown RBP18.55■□□□□ 0.56
PRDM8-201ENST00000339711 TTLL1O95922 423 aa18.55■□□□□ 0.56
PRDM8-201ENST00000339711 PTPREP23469 700 aa18.55■□□□□ 0.56
PRDM8-201ENST00000339711 U2AF2P26368 475 aaKnown RBP eCLIP18.55■□□□□ 0.56
PRDM8-201ENST00000339711 CACNB3P54284 484 aa18.55■□□□□ 0.56
PRDM8-201ENST00000339711 WWC2Q6AWC2 1192 aa18.55■□□□□ 0.56
PRDM8-201ENST00000339711 NIM1KQ8IY84 436 aa18.55■□□□□ 0.56
PRDM8-201ENST00000339711 BLZF1Q9H2G9 400 aa18.55■□□□□ 0.56
PRDM8-201ENST00000339711 CPVLQ9H3G5 476 aa18.55■□□□□ 0.56
PRDM8-201ENST00000339711 COL18A1P39060 1754 aa18.55■□□□□ 0.56
PRDM8-201ENST00000339711 MATR3P43243 847 aaKnown RBP eCLIP18.55■□□□□ 0.56
PRDM8-201ENST00000339711 MCM6Q14566 821 aa18.55■□□□□ 0.56
PRDM8-201ENST00000339711 LRRC27Q9C0I9 530 aa18.55■□□□□ 0.56
PRDM8-201ENST00000339711 SEPT11Q9NVA2 429 aaKnown RBP18.55■□□□□ 0.56
PRDM8-201ENST00000339711 UBE2Q2LH0YL09 131 aa18.55■□□□□ 0.56
PRDM8-201ENST00000339711 PDLIM2Q96JY6 352 aa18.55■□□□□ 0.56
PRDM8-201ENST00000339711 TSG101Q99816 390 aa18.55■□□□□ 0.56
PRDM8-201ENST00000339711 SRBD1Q8N5C6 995 aaKnown RBP18.54■□□□□ 0.56
PRDM8-201ENST00000339711 ZYXQ15942 572 aaKnown RBP18.54■□□□□ 0.56
PRDM8-201ENST00000339711 PFKFB3Q16875 520 aaPredicted RBP18.54■□□□□ 0.56
PRDM8-201ENST00000339711 FKBP15Q5T1M5 1219 aa18.54■□□□□ 0.56
PRDM8-201ENST00000339711 LZTFL1Q9NQ48 299 aa18.54■□□□□ 0.56
PRDM8-201ENST00000339711 TCP10L2B9ZVM9 353 aa18.54■□□□□ 0.56
PRDM8-201ENST00000339711 C21orf2O43822 256 aa18.54■□□□□ 0.56
PRDM8-201ENST00000339711 WDHD1O75717 1129 aaPredicted RBP18.54■□□□□ 0.56
PRDM8-201ENST00000339711 CEP95Q96GE4 821 aa18.54■□□□□ 0.56
PRDM8-201ENST00000339711 PIGSQ96S52 555 aa18.54■□□□□ 0.56
PRDM8-201ENST00000339711 EHMT1Q9H9B1 1298 aa18.54■□□□□ 0.56
PRDM8-201ENST00000339711 ARHGEF10LQ9HCE6 1279 aa18.54■□□□□ 0.56
PRDM8-201ENST00000339711 FGFR1OPO95684 399 aaKnown RBP18.54■□□□□ 0.56
PRDM8-201ENST00000339711 ICA1Q05084 483 aa18.54■□□□□ 0.56
PRDM8-201ENST00000339711 EN1Q05925 392 aaPredicted RBP18.54■□□□□ 0.56
PRDM8-201ENST00000339711 POLLQ9UGP5 575 aa18.54■□□□□ 0.56
PRDM8-201ENST00000339711 DAGLAQ9Y4D2 1042 aa18.54■□□□□ 0.56
PRDM8-201ENST00000339711 CRKP46108 304 aa18.53■□□□□ 0.56
PRDM8-201ENST00000339711 ASPRV1Q53RT3 343 aa18.53■□□□□ 0.56
PRDM8-201ENST00000339711 NEK8Q86SG6 692 aa18.53■□□□□ 0.56
PRDM8-201ENST00000339711 COL23A1Q86Y22 540 aaPredicted RBP18.53■□□□□ 0.56
PRDM8-201ENST00000339711 NBPF3Q9H094 633 aa18.53■□□□□ 0.56
PRDM8-201ENST00000339711 LRWD1Q9UFC0 647 aa18.53■□□□□ 0.56
PRDM8-201ENST00000339711 RESP18Q5W5W9 173 aa18.53■□□□□ 0.56
PRDM8-201ENST00000339711 GRAMD1CQ8IYS0 662 aa18.53■□□□□ 0.56
PRDM8-201ENST00000339711 ERMNQ8TAM6 284 aa18.53■□□□□ 0.56
PRDM8-201ENST00000339711 CRACR2AQ9BSW2 395 aa18.53■□□□□ 0.56
PRDM8-201ENST00000339711 SLIT2O94813 1529 aa18.53■□□□□ 0.56
PRDM8-201ENST00000339711 RAD17O75943 681 aa18.53■□□□□ 0.56
PRDM8-201ENST00000339711 TDRD12Q587J7 1177 aaKnown RBP18.53■□□□□ 0.56
PRDM8-201ENST00000339711 CC2D2BQ6DHV5 1058 aa18.53■□□□□ 0.56
PRDM8-201ENST00000339711 EPSTI1Q96J88 318 aa18.53■□□□□ 0.56
PRDM8-201ENST00000339711 SLU7O95391 586 aaKnown RBP18.52■□□□□ 0.56
PRDM8-201ENST00000339711 CHRNA5P30532 468 aa18.52■□□□□ 0.56
PRDM8-201ENST00000339711 CALCRLQ16602 461 aa18.52■□□□□ 0.56
PRDM8-201ENST00000339711 SLFN13Q68D06 897 aa18.52■□□□□ 0.56
PRDM8-201ENST00000339711 MRFAP1L1Q96HT8 127 aa18.52■□□□□ 0.56
PRDM8-201ENST00000339711 GLT8D2Q9H1C3 349 aa18.52■□□□□ 0.56
PRDM8-201ENST00000339711 TROAPQ12815 778 aa18.52■□□□□ 0.56
PRDM8-201ENST00000339711 CABP7Q86V35 215 aa18.52■□□□□ 0.56
PRDM8-201ENST00000339711 FCHSD1Q86WN1 690 aa18.52■□□□□ 0.56
PRDM8-201ENST00000339711 STAG2Q8N3U4 1231 aa18.52■□□□□ 0.56
PRDM8-201ENST00000339711 NEDD1Q8NHV4 660 aa18.52■□□□□ 0.56
PRDM8-201ENST00000339711 DHX36Q9H2U1 1008 aaKnown RBP18.52■□□□□ 0.56
PRDM8-201ENST00000339711 CTNND2Q9UQB3 1225 aa18.52■□□□□ 0.56
PRDM8-201ENST00000339711 CLRN2A0PK11 232 aa18.52■□□□□ 0.55
PRDM8-201ENST00000339711 CDC25AP30304 524 aa18.52■□□□□ 0.55
PRDM8-201ENST00000339711 PPP4CP60510 307 aa18.52■□□□□ 0.55
PRDM8-201ENST00000339711 TNIP1Q15025 636 aa18.52■□□□□ 0.55
PRDM8-201ENST00000339711 USH1GQ495M9 461 aa18.52■□□□□ 0.55
PRDM8-201ENST00000339711 GPATCH4Q5T3I0 446 aaKnown RBP18.52■□□□□ 0.55
PRDM8-201ENST00000339711 CACNA2D4Q7Z3S7 1137 aa18.52■□□□□ 0.55
PRDM8-201ENST00000339711 DRC1Q96MC2 740 aa18.52■□□□□ 0.55
PRDM8-201ENST00000339711 UIMC1Q96RL1 719 aa18.52■□□□□ 0.55
PRDM8-201ENST00000339711 FANCLQ9NW38 375 aa18.52■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms