RNA–Protein interactions for RNA: ENST00000326335.8

CUL4A-201, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 3,705 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-201ENST00000326335 CACNB1Q02641 598 aaPredicted RBP12.1□□□□□ -0.47
CUL4A-201ENST00000326335 SOGA3Q5TF21 947 aa12.1□□□□□ -0.47
CUL4A-201ENST00000326335 BLIDQ8IZY5 108 aa12.1□□□□□ -0.47
CUL4A-201ENST00000326335 NUP88Q99567 741 aaPredicted RBP12.1□□□□□ -0.47
CUL4A-201ENST00000326335 PDGFDQ9GZP0 370 aaPredicted RBP12.1□□□□□ -0.47
CUL4A-201ENST00000326335 ZNF215Q9UL58 517 aaPredicted RBP12.1□□□□□ -0.47
CUL4A-201ENST00000326335 USH1GQ495M9 461 aa12.09□□□□□ -0.47
CUL4A-201ENST00000326335 RBM17Q96I25 401 aaKnown RBP12.09□□□□□ -0.47
CUL4A-201ENST00000326335 SEC63Q9UGP8 760 aaKnown RBP12.09□□□□□ -0.47
CUL4A-201ENST00000326335 SMCO2A6NFE2 343 aa12.09□□□□□ -0.47
CUL4A-201ENST00000326335 AKR1B1P15121 316 aa12.09□□□□□ -0.47
CUL4A-201ENST00000326335 PAGE5Q96GU1 130 aa12.09□□□□□ -0.47
CUL4A-201ENST00000326335 MRFAP1L1Q96HT8 127 aa12.09□□□□□ -0.47
CUL4A-201ENST00000326335 PHF20Q9BVI0 1012 aa12.09□□□□□ -0.47
CUL4A-201ENST00000326335 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.09□□□□□ -0.47
CUL4A-201ENST00000326335 PRPF3O43395 683 aaKnown RBP12.09□□□□□ -0.47
CUL4A-201ENST00000326335 TFR2Q9UP52 801 aa12.09□□□□□ -0.47
CUL4A-201ENST00000326335 PPEF1O14829 653 aaPredicted RBP12.08□□□□□ -0.48
CUL4A-201ENST00000326335 TFRCP02786 760 aaKnown RBP12.08□□□□□ -0.48
CUL4A-201ENST00000326335 TPM3P06753 285 aa12.08□□□□□ -0.48
CUL4A-201ENST00000326335 PARP1P09874 1014 aaKnown RBP12.08□□□□□ -0.48
CUL4A-201ENST00000326335 RASA1P20936 1047 aa12.08□□□□□ -0.48
CUL4A-201ENST00000326335 CCDC84Q86UT8 332 aaPredicted RBP12.08□□□□□ -0.48
CUL4A-201ENST00000326335 TRIM34Q9BYJ4 488 aa12.08□□□□□ -0.48
CUL4A-201ENST00000326335 DDX4Q9NQI0 724 aaKnown RBP12.08□□□□□ -0.48
CUL4A-201ENST00000326335 TRPC5Q9UL62 973 aaPredicted RBP12.08□□□□□ -0.48
CUL4A-201ENST00000326335 HPSEQ9Y251 543 aa12.08□□□□□ -0.48
CUL4A-201ENST00000326335 SRPRBQ9Y5M8 271 aaKnown RBP12.08□□□□□ -0.48
CUL4A-201ENST00000326335 CLRN2A0PK11 232 aa12.08□□□□□ -0.48
CUL4A-201ENST00000326335 N4BP3O15049 544 aa12.08□□□□□ -0.48
CUL4A-201ENST00000326335 SLC35G1Q2M3R5 365 aa12.08□□□□□ -0.48
CUL4A-201ENST00000326335 SLC10A5Q5PT55 438 aa12.08□□□□□ -0.48
CUL4A-201ENST00000326335 NHSL1Q5SYE7 1610 aa12.08□□□□□ -0.48
CUL4A-201ENST00000326335 PLEKHG2Q9H7P9 1386 aa12.08□□□□□ -0.48
CUL4A-201ENST00000326335 FUT2Q10981 343 aa12.08□□□□□ -0.48
CUL4A-201ENST00000326335 DPYDQ12882 1025 aa12.08□□□□□ -0.48
CUL4A-201ENST00000326335 ELF2Q15723 593 aa12.08□□□□□ -0.48
CUL4A-201ENST00000326335 IL17AQ16552 155 aa12.08□□□□□ -0.48
CUL4A-201ENST00000326335 ZNF710Q8N1W2 664 aa12.08□□□□□ -0.48
CUL4A-201ENST00000326335 FBXL16Q8N461 479 aa12.08□□□□□ -0.48
CUL4A-201ENST00000326335 PDCL2Q8N4E4 241 aa12.08□□□□□ -0.48
CUL4A-201ENST00000326335 WDR19Q8NEZ3 1342 aa12.07□□□□□ -0.48
CUL4A-201ENST00000326335 LDHCP07864 332 aa12.07□□□□□ -0.48
CUL4A-201ENST00000326335 FNBP4Q8N3X1 1017 aaPredicted RBP12.07□□□□□ -0.48
CUL4A-201ENST00000326335 KANSL2Q9H9L4 492 aa12.07□□□□□ -0.48
CUL4A-201ENST00000326335 RBM28Q9NW13 759 aaKnown RBP12.07□□□□□ -0.48
CUL4A-201ENST00000326335 FLT1P17948 1338 aa12.07□□□□□ -0.48
CUL4A-201ENST00000326335 RBM6P78332 1123 aaKnown RBP12.07□□□□□ -0.48
CUL4A-201ENST00000326335 RBM26Q5T8P6 1007 aaKnown RBP12.07□□□□□ -0.48
CUL4A-201ENST00000326335 E4F1Q66K89 784 aaPredicted RBP12.07□□□□□ -0.48
CUL4A-201ENST00000326335 DTHD1Q6ZMT9 781 aa12.07□□□□□ -0.48
CUL4A-201ENST00000326335 MYH7P12883 1935 aa12.07□□□□□ -0.48
CUL4A-201ENST00000326335 ACTN4O43707 911 aaKnown RBP12.07□□□□□ -0.48
CUL4A-201ENST00000326335 GNG11P61952 73 aa12.07□□□□□ -0.48
CUL4A-201ENST00000326335 COL23A1Q86Y22 540 aaPredicted RBP12.07□□□□□ -0.48
CUL4A-201ENST00000326335 PROM2Q8N271 834 aa12.07□□□□□ -0.48
CUL4A-201ENST00000326335 HSD3B7Q9H2F3 369 aa12.07□□□□□ -0.48
CUL4A-201ENST00000326335 DAGLAQ9Y4D2 1042 aa12.07□□□□□ -0.48
CUL4A-201ENST00000326335 SYNRGQ9UMZ2 1314 aa12.06□□□□□ -0.48
CUL4A-201ENST00000326335 POTEMA6NI47 508 aa12.06□□□□□ -0.48
CUL4A-201ENST00000326335 SOWAHDA6NJG2 315 aa12.06□□□□□ -0.48
CUL4A-201ENST00000326335 DNA2P51530 1060 aa12.06□□□□□ -0.48
CUL4A-201ENST00000326335 UBXN2AP68543 259 aa12.06□□□□□ -0.48
CUL4A-201ENST00000326335 CERS5Q8N5B7 392 aa12.06□□□□□ -0.48
CUL4A-201ENST00000326335 MED15Q96RN5 788 aa12.06□□□□□ -0.48
CUL4A-201ENST00000326335 RTFDC1Q9BY42 306 aaPredicted RBP12.06□□□□□ -0.48
CUL4A-201ENST00000326335 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.06□□□□□ -0.48
CUL4A-201ENST00000326335 ATRNO75882 1429 aa12.06□□□□□ -0.48
CUL4A-201ENST00000326335 DYNC1I1O14576 645 aa12.06□□□□□ -0.48
CUL4A-201ENST00000326335 CALM1P0DP23 149 aa12.06□□□□□ -0.48
CUL4A-201ENST00000326335 CALM2P0DP24 149 aa12.06□□□□□ -0.48
CUL4A-201ENST00000326335 CALM3P0DP25 149 aa12.06□□□□□ -0.48
CUL4A-201ENST00000326335 TXLNAP40222 546 aa12.06□□□□□ -0.48
CUL4A-201ENST00000326335 TOGARAM2Q6ZUX3 1019 aa12.06□□□□□ -0.48
CUL4A-201ENST00000326335 SPTLC3Q9NUV7 552 aa12.06□□□□□ -0.48
CUL4A-201ENST00000326335 INTS13Q9NVM9 706 aa12.06□□□□□ -0.48
CUL4A-201ENST00000326335 MAD2L2Q9UI95 211 aa12.06□□□□□ -0.48
CUL4A-201ENST00000326335 LEMD3Q9Y2U8 911 aa12.06□□□□□ -0.48
CUL4A-201ENST00000326335 ASIC1P78348 528 aa12.06□□□□□ -0.48
CUL4A-201ENST00000326335 NPY5RQ15761 445 aa12.06□□□□□ -0.48
CUL4A-201ENST00000326335 PFKFB3Q16875 520 aaPredicted RBP12.06□□□□□ -0.48
CUL4A-201ENST00000326335 PPFIBP1Q86W92 1011 aa12.06□□□□□ -0.48
CUL4A-201ENST00000326335 PPP1R13BQ96KQ4 1090 aa12.06□□□□□ -0.48
CUL4A-201ENST00000326335 CAVIN2O95810 425 aa12.05□□□□□ -0.48
CUL4A-201ENST00000326335 GSTO1P78417 241 aa12.05□□□□□ -0.48
CUL4A-201ENST00000326335 LRRC41Q15345 812 aa12.05□□□□□ -0.48
CUL4A-201ENST00000326335 ERCC6LQ2NKX8 1250 aa12.05□□□□□ -0.48
CUL4A-201ENST00000326335 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.05□□□□□ -0.48
CUL4A-201ENST00000326335 TBCKQ8TEA7 893 aa12.05□□□□□ -0.48
CUL4A-201ENST00000326335 NOC3LQ8WTT2 800 aaKnown RBP12.05□□□□□ -0.48
CUL4A-201ENST00000326335 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.05□□□□□ -0.48
CUL4A-201ENST00000326335 CICQ96RK0 1608 aaPredicted RBP12.05□□□□□ -0.48
CUL4A-201ENST00000326335 USP17L15C9J2P7 530 aa12.05□□□□□ -0.48
CUL4A-201ENST00000326335 USP17L13C9JLJ4 530 aa12.05□□□□□ -0.48
CUL4A-201ENST00000326335 USP17L11C9JVI0 530 aa12.05□□□□□ -0.48
CUL4A-201ENST00000326335 USP17L18D6R9N7 530 aa12.05□□□□□ -0.48
CUL4A-201ENST00000326335 USP17L22D6RA61 530 aa12.05□□□□□ -0.48
CUL4A-201ENST00000326335 USP17L17D6RBQ6 530 aa12.05□□□□□ -0.48
CUL4A-201ENST00000326335 USP17L19D6RCP7 530 aa12.05□□□□□ -0.48
CUL4A-201ENST00000326335 USP17L20D6RJB6 530 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms