RNA–Protein interactions for RNA: ENST00000324771.12

DDR1-223, Transcript of discoidin domain receptor tyrosine kinase 1, human

APPRIS ALT2 TSL 5 BASIC

Gene DDR1, Length 4,148 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-223	ENST00000324771	USP32	Q8NFA0	1604 aa		13.29	□□□□□ -0.28
DDR1-223	ENST00000324771	CTDNEP1	O95476	244 aa		13.28	□□□□□ -0.28
DDR1-223	ENST00000324771	NKX1-1	Q15270	411 aa	Predicted RBP	13.28	□□□□□ -0.28
DDR1-223	ENST00000324771	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	13.28	□□□□□ -0.28
DDR1-223	ENST00000324771	PRR16	Q569H4	304 aa		13.28	□□□□□ -0.28
DDR1-223	ENST00000324771	TXNRD3	Q86VQ6	643 aa		13.28	□□□□□ -0.28
DDR1-223	ENST00000324771	RDH13	Q8NBN7	331 aa		13.28	□□□□□ -0.28
DDR1-223	ENST00000324771	HINFP	Q9BQA5	517 aa		13.28	□□□□□ -0.28
DDR1-223	ENST00000324771	FAM207A	Q9NSI2	230 aa	Predicted RBP	13.28	□□□□□ -0.28
DDR1-223	ENST00000324771	SAMSN1	Q9NSI8	373 aa	Known RBP	13.28	□□□□□ -0.28
DDR1-223	ENST00000324771	NEURL4	Q96JN8	1562 aa		13.28	□□□□□ -0.28
DDR1-223	ENST00000324771	BBOX1	O75936	387 aa		13.28	□□□□□ -0.28
DDR1-223	ENST00000324771	KIF20A	O95235	890 aa		13.28	□□□□□ -0.28
DDR1-223	ENST00000324771	CTR9	Q6PD62	1173 aa		13.28	□□□□□ -0.28
DDR1-223	ENST00000324771	C3orf67	Q6ZVT6	689 aa		13.28	□□□□□ -0.28
DDR1-223	ENST00000324771	KRT25	Q7Z3Z0	450 aa		13.28	□□□□□ -0.28
DDR1-223	ENST00000324771	CRACR2A	Q9BSW2	395 aa		13.28	□□□□□ -0.28
DDR1-223	ENST00000324771	SERPINB13	Q9UIV8	391 aa		13.28	□□□□□ -0.28
DDR1-223	ENST00000324771	ATF5	Q9Y2D1	282 aa	Predicted RBP	13.28	□□□□□ -0.28
DDR1-223	ENST00000324771		A0A1W2PQ27	194 aa		13.28	□□□□□ -0.28
DDR1-223	ENST00000324771		A0A1W2PQ64	194 aa		13.28	□□□□□ -0.28
DDR1-223	ENST00000324771		A0A1W2PQD8	194 aa		13.28	□□□□□ -0.28
DDR1-223	ENST00000324771	TMEM232	C9JQI7	657 aa		13.28	□□□□□ -0.28
DDR1-223	ENST00000324771	C21orf2	O43822	256 aa		13.28	□□□□□ -0.28
DDR1-223	ENST00000324771	CDK8	P49336	464 aa		13.28	□□□□□ -0.28
DDR1-223	ENST00000324771	CARD6	Q9BX69	1037 aa		13.28	□□□□□ -0.28
DDR1-223	ENST00000324771	PSTPIP2	Q9H939	334 aa		13.28	□□□□□ -0.28
DDR1-223	ENST00000324771	NLRC4	Q9NPP4	1024 aa		13.28	□□□□□ -0.28
DDR1-223	ENST00000324771	PCDHA1	Q9Y5I3	950 aa		13.28	□□□□□ -0.28
DDR1-223	ENST00000324771	NTSR2	O95665	410 aa		13.28	□□□□□ -0.28
DDR1-223	ENST00000324771	U2AF2	P26368	475 aa	Known RBP eCLIP	13.28	□□□□□ -0.28
DDR1-223	ENST00000324771	HSPA1L	P34931	641 aa		13.28	□□□□□ -0.28
DDR1-223	ENST00000324771	ICA1	Q05084	483 aa		13.28	□□□□□ -0.28
DDR1-223	ENST00000324771	RAPGEF1	Q13905	1077 aa		13.28	□□□□□ -0.28
DDR1-223	ENST00000324771	UBE2S	Q16763	222 aa		13.28	□□□□□ -0.28
DDR1-223	ENST00000324771	FAM13A	O94988	1023 aa		13.27	□□□□□ -0.28
DDR1-223	ENST00000324771	FDPS	P14324	419 aa	Known RBP	13.27	□□□□□ -0.28
DDR1-223	ENST00000324771	SLFN13	Q68D06	897 aa		13.27	□□□□□ -0.28
DDR1-223	ENST00000324771	BICD1	Q96G01	975 aa		13.27	□□□□□ -0.28
DDR1-223	ENST00000324771	SMIM22	K7EJ46	135 aa		13.27	□□□□□ -0.29
DDR1-223	ENST00000324771	GPSM2	P81274	684 aa		13.27	□□□□□ -0.29
DDR1-223	ENST00000324771	PTPRO	Q16827	1216 aa		13.27	□□□□□ -0.29
DDR1-223	ENST00000324771	STAG2	Q8N3U4	1231 aa		13.27	□□□□□ -0.29
DDR1-223	ENST00000324771	PLEKHA4	Q9H4M7	779 aa		13.27	□□□□□ -0.29
DDR1-223	ENST00000324771	ADGRB2	O60241	1585 aa		13.27	□□□□□ -0.29
DDR1-223	ENST00000324771	PHACTR2	O75167	634 aa		13.27	□□□□□ -0.29
DDR1-223	ENST00000324771	POLD1	P28340	1107 aa		13.27	□□□□□ -0.29
DDR1-223	ENST00000324771	PAFAH1B1	P43034	410 aa		13.27	□□□□□ -0.29
DDR1-223	ENST00000324771	CASP7	P55210	303 aa		13.27	□□□□□ -0.29
DDR1-223	ENST00000324771	DHX37	Q8IY37	1157 aa	Known RBP	13.27	□□□□□ -0.29
DDR1-223	ENST00000324771	WDHD1	O75717	1129 aa	Predicted RBP	13.26	□□□□□ -0.29
DDR1-223	ENST00000324771	LRRC41	Q15345	812 aa		13.26	□□□□□ -0.29
DDR1-223	ENST00000324771	TXNRD1	Q16881	649 aa		13.26	□□□□□ -0.29
DDR1-223	ENST00000324771	USP49	Q70CQ1	688 aa		13.26	□□□□□ -0.29
DDR1-223	ENST00000324771	LRRC8A	Q8IWT6	810 aa		13.26	□□□□□ -0.29
DDR1-223	ENST00000324771	FOXP1	Q9H334	677 aa	Predicted RBP	13.26	□□□□□ -0.29
DDR1-223	ENST00000324771	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	13.26	□□□□□ -0.29
DDR1-223	ENST00000324771	DDIT3	P35638	169 aa		13.26	□□□□□ -0.29
DDR1-223	ENST00000324771	HLTF	Q14527	1009 aa	Known RBP eCLIP	13.26	□□□□□ -0.29
DDR1-223	ENST00000324771	CCDC122	Q5T0U0	273 aa		13.26	□□□□□ -0.29
DDR1-223	ENST00000324771	TBCK	Q8TEA7	893 aa		13.26	□□□□□ -0.29
DDR1-223	ENST00000324771	STAG1	Q8WVM7	1258 aa		13.26	□□□□□ -0.29
DDR1-223	ENST00000324771	CSRNP1	Q96S65	589 aa		13.26	□□□□□ -0.29
DDR1-223	ENST00000324771	KIF20B	Q96Q89	1820 aa		13.26	□□□□□ -0.29
DDR1-223	ENST00000324771	CYLC1	P35663	651 aa	Predicted RBP	13.26	□□□□□ -0.29
DDR1-223	ENST00000324771	ELF2	Q15723	593 aa		13.26	□□□□□ -0.29
DDR1-223	ENST00000324771	TSGA10IP	Q3SY00	556 aa		13.26	□□□□□ -0.29
DDR1-223	ENST00000324771	ARHGAP30	Q7Z6I6	1101 aa	Predicted RBP	13.26	□□□□□ -0.29
DDR1-223	ENST00000324771	NEK8	Q86SG6	692 aa		13.26	□□□□□ -0.29
DDR1-223	ENST00000324771	TDRD7	Q8NHU6	1098 aa	Known RBP	13.26	□□□□□ -0.29
DDR1-223	ENST00000324771	PCDHA12	Q9UN75	941 aa		13.26	□□□□□ -0.29
DDR1-223	ENST00000324771	PP2D1	A8MPX8	630 aa		13.25	□□□□□ -0.29
DDR1-223	ENST00000324771	BACH1	O14867	736 aa		13.25	□□□□□ -0.29
DDR1-223	ENST00000324771	DDAH1	O94760	285 aa		13.25	□□□□□ -0.29
DDR1-223	ENST00000324771	HARS	P12081	509 aa	Known RBP	13.25	□□□□□ -0.29
DDR1-223	ENST00000324771	TPH2	Q8IWU9	490 aa		13.25	□□□□□ -0.29
DDR1-223	ENST00000324771	TMEM47	Q9BQJ4	181 aa		13.25	□□□□□ -0.29
DDR1-223	ENST00000324771	TCHP	Q9BT92	498 aa		13.25	□□□□□ -0.29
DDR1-223	ENST00000324771	PLA2G12B	Q9BX93	195 aa		13.25	□□□□□ -0.29
DDR1-223	ENST00000324771	EHMT1	Q9H9B1	1298 aa		13.25	□□□□□ -0.29
DDR1-223	ENST00000324771	ZNF408	Q9H9D4	720 aa		13.25	□□□□□ -0.29
DDR1-223	ENST00000324771	CLEC11A	Q9Y240	323 aa		13.25	□□□□□ -0.29
DDR1-223	ENST00000324771	SEMA3E	O15041	775 aa		13.25	□□□□□ -0.29
DDR1-223	ENST00000324771	NSUN4	Q96CB9	384 aa	Known RBP	13.25	□□□□□ -0.29
DDR1-223	ENST00000324771	TDRD3	Q9H7E2	651 aa	Known RBP	13.25	□□□□□ -0.29
DDR1-223	ENST00000324771	SHPRH	Q149N8	1683 aa		13.25	□□□□□ -0.29
DDR1-223	ENST00000324771	CHRNA5	P30532	468 aa		13.25	□□□□□ -0.29
DDR1-223	ENST00000324771	SPECC1L	Q69YQ0	1117 aa		13.25	□□□□□ -0.29
DDR1-223	ENST00000324771	VPS36	Q86VN1	386 aa		13.25	□□□□□ -0.29
DDR1-223	ENST00000324771	TMEM87A	Q8NBN3	555 aa		13.25	□□□□□ -0.29
DDR1-223	ENST00000324771	NEK11	Q8NG66	645 aa		13.25	□□□□□ -0.29
DDR1-223	ENST00000324771	OR52Z1	P0C646	297 aa		13.24	□□□□□ -0.29
DDR1-223	ENST00000324771	KIF5A	Q12840	1032 aa		13.24	□□□□□ -0.29
DDR1-223	ENST00000324771	IGDCC4	Q8TDY8	1250 aa		13.24	□□□□□ -0.29
DDR1-223	ENST00000324771	FAM212A	Q96EL1	285 aa		13.24	□□□□□ -0.29
DDR1-223	ENST00000324771	ARHGEF10L	Q9HCE6	1279 aa		13.24	□□□□□ -0.29
DDR1-223	ENST00000324771	USP17L5	A8MUK1	530 aa		13.24	□□□□□ -0.29
DDR1-223	ENST00000324771	NIM1K	Q8IY84	436 aa		13.24	□□□□□ -0.29
DDR1-223	ENST00000324771	RGS22	Q8NE09	1264 aa		13.24	□□□□□ -0.29
DDR1-223	ENST00000324771	BICDL2	A1A5D9	508 aa		13.24	□□□□□ -0.29

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