RNA–Protein interactions for RNA: ENST00000321027.7

GCFC2-201, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCFC2, Length 4,440 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-201ENST00000321027 AK9Q5TCS8 1911 aa17.17■□□□□ 0.34
GCFC2-201ENST00000321027 NEURL4Q96JN8 1562 aa17.17■□□□□ 0.34
GCFC2-201ENST00000321027 C8orf74Q6P047 294 aa17.16■□□□□ 0.34
GCFC2-201ENST00000321027 LCORLQ8N3X6 602 aa17.16■□□□□ 0.34
GCFC2-201ENST00000321027 GOLGA8HP0CJ92 632 aa17.16■□□□□ 0.34
GCFC2-201ENST00000321027 GJC1P36383 396 aa17.16■□□□□ 0.34
GCFC2-201ENST00000321027 SND1Q7KZF4 910 aaKnown RBP eCLIP17.16■□□□□ 0.34
GCFC2-201ENST00000321027 C2CD5Q86YS7 1000 aa17.16■□□□□ 0.34
GCFC2-201ENST00000321027 SLC35F6Q8N357 371 aa17.16■□□□□ 0.34
GCFC2-201ENST00000321027 SMARCC2Q8TAQ2 1214 aa17.16■□□□□ 0.34
GCFC2-201ENST00000321027 EPSTI1Q96J88 318 aa17.16■□□□□ 0.34
GCFC2-201ENST00000321027 PAIP2Q9BPZ3 127 aaKnown RBP17.16■□□□□ 0.34
GCFC2-201ENST00000321027 ENC1O14682 589 aa17.16■□□□□ 0.34
GCFC2-201ENST00000321027 IFNAR1P17181 557 aa17.16■□□□□ 0.34
GCFC2-201ENST00000321027 RBM26Q5T8P6 1007 aaKnown RBP17.16■□□□□ 0.34
GCFC2-201ENST00000321027 VSTM4Q8IW00 320 aa17.16■□□□□ 0.34
GCFC2-201ENST00000321027 RASGRP4Q8TDF6 673 aa17.16■□□□□ 0.34
GCFC2-201ENST00000321027 CYP2D7A0A087X1C5 515 aa17.16■□□□□ 0.34
GCFC2-201ENST00000321027 SMIM23A6NLE4 172 aa17.16■□□□□ 0.34
GCFC2-201ENST00000321027 TMEM232C9JQI7 657 aa17.16■□□□□ 0.34
GCFC2-201ENST00000321027 FMNL1O95466 1100 aaPredicted RBP17.16■□□□□ 0.34
GCFC2-201ENST00000321027 RBL2Q08999 1139 aa17.16■□□□□ 0.34
GCFC2-201ENST00000321027 SNX29Q8TEQ0 813 aa17.16■□□□□ 0.34
GCFC2-201ENST00000321027 FOXP1Q9H334 677 aaPredicted RBP17.16■□□□□ 0.34
GCFC2-201ENST00000321027 SOWAHDA6NJG2 315 aa17.15■□□□□ 0.34
GCFC2-201ENST00000321027 MMP1P03956 469 aa17.15■□□□□ 0.34
GCFC2-201ENST00000321027 SCG2P13521 617 aa17.15■□□□□ 0.34
GCFC2-201ENST00000321027 BRD3Q15059 726 aa17.15■□□□□ 0.34
GCFC2-201ENST00000321027 NELFCDQ8IXH7 590 aa17.15■□□□□ 0.34
GCFC2-201ENST00000321027 BLIDQ8IZY5 108 aa17.15■□□□□ 0.34
GCFC2-201ENST00000321027 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.15■□□□□ 0.34
GCFC2-201ENST00000321027 SRP68Q9UHB9 627 aaKnown RBP17.15■□□□□ 0.34
GCFC2-201ENST00000321027 APBA3O96018 575 aa17.15■□□□□ 0.34
GCFC2-201ENST00000321027 GRIPAP1Q4V328 841 aa17.15■□□□□ 0.34
GCFC2-201ENST00000321027 RRAGAQ7L523 313 aa17.15■□□□□ 0.34
GCFC2-201ENST00000321027 TBC1D10CQ8IV04 446 aa17.15■□□□□ 0.34
GCFC2-201ENST00000321027 ZNF804BA4D1E1 1349 aa17.15■□□□□ 0.34
GCFC2-201ENST00000321027 PALLDQ8WX93 1383 aa17.15■□□□□ 0.34
GCFC2-201ENST00000321027 A0A1W2PRG0 241 aa17.15■□□□□ 0.34
GCFC2-201ENST00000321027 GOLGA6CA6NDK9 693 aa17.15■□□□□ 0.34
GCFC2-201ENST00000321027 GOLGA6DP0CG33 693 aa17.15■□□□□ 0.34
GCFC2-201ENST00000321027 CASP1P29466 404 aa17.15■□□□□ 0.34
GCFC2-201ENST00000321027 PNMA1Q8ND90 353 aa17.15■□□□□ 0.34
GCFC2-201ENST00000321027 GOLGA6AQ9NYA3 693 aa17.15■□□□□ 0.34
GCFC2-201ENST00000321027 EPN1Q9Y6I3 576 aaPredicted RBP17.15■□□□□ 0.34
GCFC2-201ENST00000321027 RASGRF1Q13972 1273 aa17.14■□□□□ 0.34
GCFC2-201ENST00000321027 CCDC51Q96ER9 411 aa17.14■□□□□ 0.34
GCFC2-201ENST00000321027 TCHPQ9BT92 498 aa17.14■□□□□ 0.34
GCFC2-201ENST00000321027 PDE11AQ9HCR9 933 aa17.14■□□□□ 0.34
GCFC2-201ENST00000321027 HPDP32754 393 aaPredicted RBP17.14■□□□□ 0.33
GCFC2-201ENST00000321027 DYNLL1P63167 89 aaKnown RBP17.14■□□□□ 0.33
GCFC2-201ENST00000321027 SCARF1Q14162 830 aa17.14■□□□□ 0.33
GCFC2-201ENST00000321027 PLS1Q14651 629 aa17.14■□□□□ 0.33
GCFC2-201ENST00000321027 HS2ST1Q7LGA3 356 aa17.14■□□□□ 0.33
GCFC2-201ENST00000321027 ANKRD13CQ8N6S4 541 aa17.14■□□□□ 0.33
GCFC2-201ENST00000321027 IFIH1Q9BYX4 1025 aaKnown RBP17.14■□□□□ 0.33
GCFC2-201ENST00000321027 TSGA10Q9BZW7 698 aa17.14■□□□□ 0.33
GCFC2-201ENST00000321027 SPDYE3A6NKU9 549 aa17.14■□□□□ 0.33
GCFC2-201ENST00000321027 TMEM110-MUSTN1A8MSY1 372 aa17.14■□□□□ 0.33
GCFC2-201ENST00000321027 HERC4Q5GLZ8 1057 aaPredicted RBP17.14■□□□□ 0.33
GCFC2-201ENST00000321027 OTUD6BQ8N6M0 293 aa17.14■□□□□ 0.33
GCFC2-201ENST00000321027 FBF1Q8TES7 1133 aa17.14■□□□□ 0.33
GCFC2-201ENST00000321027 NUP58Q9BVL2 599 aa17.14■□□□□ 0.33
GCFC2-201ENST00000321027 GOLGA6BA6NDN3 693 aa17.14■□□□□ 0.33
GCFC2-201ENST00000321027 ACRBPQ8NEB7 543 aa17.14■□□□□ 0.33
GCFC2-201ENST00000321027 RABGGTAQ92696 567 aa17.14■□□□□ 0.33
GCFC2-201ENST00000321027 CDC23Q9UJX2 597 aa17.14■□□□□ 0.33
GCFC2-201ENST00000321027 IKBKGQ9Y6K9 419 aa17.14■□□□□ 0.33
GCFC2-201ENST00000321027 ERCC5P28715 1186 aaPredicted RBP17.13■□□□□ 0.33
GCFC2-201ENST00000321027 TCP10Q12799 353 aa17.13■□□□□ 0.33
GCFC2-201ENST00000321027 CYP19A1P11511 503 aaPredicted RBP17.13■□□□□ 0.33
GCFC2-201ENST00000321027 COPB1P53618 953 aaKnown RBP17.13■□□□□ 0.33
GCFC2-201ENST00000321027 TSGA10IPQ3SY00 556 aa17.13■□□□□ 0.33
GCFC2-201ENST00000321027 CYB5R4Q7L1T6 521 aa17.13■□□□□ 0.33
GCFC2-201ENST00000321027 CCDC65Q8IXS2 484 aa17.13■□□□□ 0.33
GCFC2-201ENST00000321027 GSDMAQ96QA5 445 aa17.13■□□□□ 0.33
GCFC2-201ENST00000321027 ARPP21Q9UBL0 812 aaPredicted RBP17.13■□□□□ 0.33
GCFC2-201ENST00000321027 BIN2Q9UBW5 565 aaPredicted RBP17.13■□□□□ 0.33
GCFC2-201ENST00000321027 RPN1P04843 607 aaKnown RBP17.13■□□□□ 0.33
GCFC2-201ENST00000321027 TECP42680 631 aa17.13■□□□□ 0.33
GCFC2-201ENST00000321027 MRPL12P52815 198 aaKnown RBP17.13■□□□□ 0.33
GCFC2-201ENST00000321027 PLCB3Q01970 1234 aa17.13■□□□□ 0.33
GCFC2-201ENST00000321027 MSL1Q68DK7 614 aa17.13■□□□□ 0.33
GCFC2-201ENST00000321027 ENOX1Q8TC92 643 aaKnown RBP17.13■□□□□ 0.33
GCFC2-201ENST00000321027 ISCA1Q9BUE6 129 aa17.13■□□□□ 0.33
GCFC2-201ENST00000321027 USP42Q9H9J4 1324 aaKnown RBP17.13■□□□□ 0.33
GCFC2-201ENST00000321027 SMCO2A6NFE2 343 aa17.12■□□□□ 0.33
GCFC2-201ENST00000321027 GTPBP6O43824 516 aaPredicted RBP17.12■□□□□ 0.33
GCFC2-201ENST00000321027 LONRF2Q1L5Z9 754 aa17.12■□□□□ 0.33
GCFC2-201ENST00000321027 STRBPQ96SI9 672 aaKnown RBP17.12■□□□□ 0.33
GCFC2-201ENST00000321027 RNF26Q9BY78 433 aaPredicted RBP17.12■□□□□ 0.33
GCFC2-201ENST00000321027 SERPINA10Q9UK55 444 aa17.12■□□□□ 0.33
GCFC2-201ENST00000321027 NDUFAB1O14561 156 aa17.12■□□□□ 0.33
GCFC2-201ENST00000321027 SLFN14P0C7P3 912 aa17.12■□□□□ 0.33
GCFC2-201ENST00000321027 IQCB1Q15051 598 aa17.12■□□□□ 0.33
GCFC2-201ENST00000321027 DHX40Q8IX18 779 aaKnown RBP17.12■□□□□ 0.33
GCFC2-201ENST00000321027 TBC1D22AQ8WUA7 517 aa17.12■□□□□ 0.33
GCFC2-201ENST00000321027 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.12■□□□□ 0.33
GCFC2-201ENST00000321027 CEMIPQ8WUJ3 1361 aa17.12■□□□□ 0.33
GCFC2-201ENST00000321027 ZMYND10O75800 440 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms