RNA–Protein interactions for RNA: ENST00000316097.12

SCAMP4-201, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP4, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-201ENST00000316097 ADAM21Q9UKJ8 722 aa19.51■□□□□ 0.71
SCAMP4-201ENST00000316097 PCDHA5Q9Y5H7 936 aa19.51■□□□□ 0.71
SCAMP4-201ENST00000316097 GOLGA8AA7E2F4 631 aa19.5■□□□□ 0.71
SCAMP4-201ENST00000316097 STX10O60499 249 aa19.5■□□□□ 0.71
SCAMP4-201ENST00000316097 LONRF3Q496Y0 759 aa19.5■□□□□ 0.71
SCAMP4-201ENST00000316097 FOXP4Q8IVH2 680 aaPredicted RBP19.5■□□□□ 0.71
SCAMP4-201ENST00000316097 JMYQ8N9B5 988 aa19.5■□□□□ 0.71
SCAMP4-201ENST00000316097 CNNM3Q8NE01 707 aa19.5■□□□□ 0.71
SCAMP4-201ENST00000316097 UBAC1Q9BSL1 405 aa19.5■□□□□ 0.71
SCAMP4-201ENST00000316097 TNKSO95271 1327 aa19.5■□□□□ 0.71
SCAMP4-201ENST00000316097 BTDP43251 543 aa19.5■□□□□ 0.71
SCAMP4-201ENST00000316097 SGMS1Q86VZ5 419 aa19.5■□□□□ 0.71
SCAMP4-201ENST00000316097 ESR2Q92731 530 aa19.5■□□□□ 0.71
SCAMP4-201ENST00000316097 RTFDC1Q9BY42 306 aaPredicted RBP19.5■□□□□ 0.71
SCAMP4-201ENST00000316097 PPP6R2O75170 966 aa19.49■□□□□ 0.71
SCAMP4-201ENST00000316097 TXLNAP40222 546 aa19.49■□□□□ 0.71
SCAMP4-201ENST00000316097 LIFRP42702 1097 aa19.49■□□□□ 0.71
SCAMP4-201ENST00000316097 PDE4CQ08493 712 aa19.49■□□□□ 0.71
SCAMP4-201ENST00000316097 CERS5Q8N5B7 392 aa19.49■□□□□ 0.71
SCAMP4-201ENST00000316097 ZBTB9Q96C00 473 aa19.49■□□□□ 0.71
SCAMP4-201ENST00000316097 ALG1Q9BT22 464 aa19.49■□□□□ 0.71
SCAMP4-201ENST00000316097 ATP8A2Q9NTI2 1148 aa19.49■□□□□ 0.71
SCAMP4-201ENST00000316097 FOXN1O15353 648 aa19.49■□□□□ 0.71
SCAMP4-201ENST00000316097 MYO1BO43795 1136 aa19.49■□□□□ 0.71
SCAMP4-201ENST00000316097 BMP6P22004 513 aa19.49■□□□□ 0.71
SCAMP4-201ENST00000316097 PTPAQ15257 358 aa19.49■□□□□ 0.71
SCAMP4-201ENST00000316097 PLCD3Q8N3E9 789 aa19.49■□□□□ 0.71
SCAMP4-201ENST00000316097 LCMT1Q9UIC8 334 aa19.49■□□□□ 0.71
SCAMP4-201ENST00000316097 ERICH2A1L162 156 aa19.48■□□□□ 0.71
SCAMP4-201ENST00000316097 SF3B2Q13435 895 aaKnown RBP19.48■□□□□ 0.71
SCAMP4-201ENST00000316097 RESP18Q5W5W9 173 aa19.48■□□□□ 0.71
SCAMP4-201ENST00000316097 SPECC1LQ69YQ0 1117 aa19.48■□□□□ 0.71
SCAMP4-201ENST00000316097 EXOC4Q96A65 974 aa19.48■□□□□ 0.71
SCAMP4-201ENST00000316097 IRX2Q9BZI1 471 aaPredicted RBP19.48■□□□□ 0.71
SCAMP4-201ENST00000316097 CCDC151A5D8V7 595 aa19.48■□□□□ 0.71
SCAMP4-201ENST00000316097 SCNN1DP51172 638 aa19.48■□□□□ 0.71
SCAMP4-201ENST00000316097 PLCD1P51178 756 aa19.48■□□□□ 0.71
SCAMP4-201ENST00000316097 NTRK3Q16288 839 aa19.48■□□□□ 0.71
SCAMP4-201ENST00000316097 C10orf67Q8IYJ2 551 aa19.48■□□□□ 0.71
SCAMP4-201ENST00000316097 ENAHQ8N8S7 591 aaPredicted RBP19.48■□□□□ 0.71
SCAMP4-201ENST00000316097 SLC44A5Q8NCS7 719 aa19.48■□□□□ 0.71
SCAMP4-201ENST00000316097 RASSF4Q9H2L5 321 aa19.48■□□□□ 0.71
SCAMP4-201ENST00000316097 CWC15Q9P013 229 aaKnown RBP19.48■□□□□ 0.71
SCAMP4-201ENST00000316097 MKRN1Q9UHC7 482 aaKnown RBP19.48■□□□□ 0.71
SCAMP4-201ENST00000316097 G3V3G9 751 aa19.48■□□□□ 0.71
SCAMP4-201ENST00000316097 MYO1CO00159 1063 aa19.48■□□□□ 0.71
SCAMP4-201ENST00000316097 SART3Q15020 963 aaKnown RBP19.48■□□□□ 0.71
SCAMP4-201ENST00000316097 DCAF8Q5TAQ9 597 aa19.48■□□□□ 0.71
SCAMP4-201ENST00000316097 KRT40Q6A162 431 aa19.48■□□□□ 0.71
SCAMP4-201ENST00000316097 TMC4Q7Z404 712 aa19.48■□□□□ 0.71
SCAMP4-201ENST00000316097 GOLGA5Q8TBA6 731 aa19.48■□□□□ 0.71
SCAMP4-201ENST00000316097 COL11A2P13942 1736 aaPredicted RBP19.47■□□□□ 0.71
SCAMP4-201ENST00000316097 TRIM66O15016 1216 aa19.47■□□□□ 0.71
SCAMP4-201ENST00000316097 BAG3O95817 575 aa19.47■□□□□ 0.71
SCAMP4-201ENST00000316097 MTF1Q14872 753 aa19.47■□□□□ 0.71
SCAMP4-201ENST00000316097 JAKMIP3Q5VZ66 844 aa19.47■□□□□ 0.71
SCAMP4-201ENST00000316097 ZSCAN10Q96SZ4 725 aaPredicted RBP19.47■□□□□ 0.71
SCAMP4-201ENST00000316097 TMX4Q9H1E5 349 aaPredicted RBP19.47■□□□□ 0.71
SCAMP4-201ENST00000316097 MRPL44Q9H9J2 332 aaKnown RBP19.47■□□□□ 0.71
SCAMP4-201ENST00000316097 KCNH3Q9ULD8 1083 aa19.47■□□□□ 0.71
SCAMP4-201ENST00000316097 NFE2L3Q9Y4A8 694 aa19.47■□□□□ 0.71
SCAMP4-201ENST00000316097 NRXN2Q9P2S2 1712 aa19.47■□□□□ 0.71
SCAMP4-201ENST00000316097 GUCY1A2P33402 732 aa19.47■□□□□ 0.71
SCAMP4-201ENST00000316097 GSTO1P78417 241 aa19.47■□□□□ 0.71
SCAMP4-201ENST00000316097 SEC23AQ15436 765 aa19.47■□□□□ 0.71
SCAMP4-201ENST00000316097 SPECC1Q5M775 1068 aa19.47■□□□□ 0.71
SCAMP4-201ENST00000316097 TRMT44Q8IYL2 757 aaKnown RBP19.47■□□□□ 0.71
SCAMP4-201ENST00000316097 COA1Q9GZY4 146 aa19.47■□□□□ 0.71
SCAMP4-201ENST00000316097 CHMP4BP1P59074 171 aa19.46■□□□□ 0.71
SCAMP4-201ENST00000316097 MAP3K14Q99558 947 aa19.46■□□□□ 0.71
SCAMP4-201ENST00000316097 SLC26A6Q9BXS9 759 aa19.46■□□□□ 0.71
SCAMP4-201ENST00000316097 PUF60Q9UHX1 559 aaKnown RBP19.46■□□□□ 0.71
SCAMP4-201ENST00000316097 CHD4Q14839 1912 aa19.46■□□□□ 0.71
SCAMP4-201ENST00000316097 DUOX1Q9NRD9 1551 aa19.46■□□□□ 0.71
SCAMP4-201ENST00000316097 FAM237AA0A1B0GTK4 181 aa19.46■□□□□ 0.71
SCAMP4-201ENST00000316097 hCG_1642624A0A1W2PR95 340 aa19.46■□□□□ 0.71
SCAMP4-201ENST00000316097 TNNT3P45378 269 aaPredicted RBP19.46■□□□□ 0.71
SCAMP4-201ENST00000316097 FMR1Q06787 632 aaKnown RBP eCLIP19.46■□□□□ 0.71
SCAMP4-201ENST00000316097 MCM6Q14566 821 aa19.46■□□□□ 0.71
SCAMP4-201ENST00000316097 BRD3Q15059 726 aa19.46■□□□□ 0.71
SCAMP4-201ENST00000316097 ZNF654Q8IZM8 581 aa19.46■□□□□ 0.71
SCAMP4-201ENST00000316097 ZFP91Q96JP5 570 aaPredicted RBP19.46■□□□□ 0.71
SCAMP4-201ENST00000316097 PSD3Q9NYI0 1048 aa19.46■□□□□ 0.71
SCAMP4-201ENST00000316097 MAP2K7O14733 419 aa19.45■□□□□ 0.7
SCAMP4-201ENST00000316097 BAG6P46379 1132 aa19.45■□□□□ 0.7
SCAMP4-201ENST00000316097 C12orf60Q5U649 245 aa19.45■□□□□ 0.7
SCAMP4-201ENST00000316097 PDE11AQ9HCR9 933 aa19.45■□□□□ 0.7
SCAMP4-201ENST00000316097 LZTFL1Q9NQ48 299 aa19.45■□□□□ 0.7
SCAMP4-201ENST00000316097 VPS18Q9P253 973 aa19.45■□□□□ 0.7
SCAMP4-201ENST00000316097 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.45■□□□□ 0.7
SCAMP4-201ENST00000316097 TIAM2Q8IVF5 1701 aa19.45■□□□□ 0.7
SCAMP4-201ENST00000316097 SRCAPQ6ZRS2 3230 aa19.45■□□□□ 0.7
SCAMP4-201ENST00000316097 LDHCP07864 332 aa19.45■□□□□ 0.7
SCAMP4-201ENST00000316097 IARSP41252 1262 aaKnown RBP19.45■□□□□ 0.7
SCAMP4-201ENST00000316097 ARPP21Q9UBL0 812 aaPredicted RBP19.45■□□□□ 0.7
SCAMP4-201ENST00000316097 GPR75-ASB3A0A0A6YYF3 556 aa19.44■□□□□ 0.7
SCAMP4-201ENST00000316097 CUTAO60888 179 aa19.44■□□□□ 0.7
SCAMP4-201ENST00000316097 FGRP09769 529 aa19.44■□□□□ 0.7
SCAMP4-201ENST00000316097 PPP4CP60510 307 aa19.44■□□□□ 0.7
SCAMP4-201ENST00000316097 SRGAP1Q7Z6B7 1085 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms