RNA–Protein interactions for RNA: ENST00000308177.4

PCDHGC3-201, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGC3, Length 4,725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-201ENST00000308177 RIOK3O14730 519 aaKnown RBP12.77□□□□□ -0.36
PCDHGC3-201ENST00000308177 BACH1O14867 736 aa12.77□□□□□ -0.36
PCDHGC3-201ENST00000308177 TMTC1Q8IUR5 882 aa12.77□□□□□ -0.36
PCDHGC3-201ENST00000308177 CHURC1Q8WUH1 139 aa12.77□□□□□ -0.36
PCDHGC3-201ENST00000308177 PUF60Q9UHX1 559 aaKnown RBP12.77□□□□□ -0.36
PCDHGC3-201ENST00000308177 STK24Q9Y6E0 443 aa12.77□□□□□ -0.36
PCDHGC3-201ENST00000308177 RAD51AP2Q09MP3 1159 aa12.77□□□□□ -0.37
PCDHGC3-201ENST00000308177 SLFN13Q68D06 897 aa12.77□□□□□ -0.37
PCDHGC3-201ENST00000308177 TAX1BP1Q86VP1 789 aa12.77□□□□□ -0.37
PCDHGC3-201ENST00000308177 RASGRP4Q8TDF6 673 aa12.77□□□□□ -0.37
PCDHGC3-201ENST00000308177 TCHPQ9BT92 498 aa12.77□□□□□ -0.37
PCDHGC3-201ENST00000308177 NUP58Q9BVL2 599 aa12.77□□□□□ -0.37
PCDHGC3-201ENST00000308177 PCDHA4Q9UN74 947 aa12.77□□□□□ -0.37
PCDHGC3-201ENST00000308177 A0A087WWV3 80 aa12.77□□□□□ -0.37
PCDHGC3-201ENST00000308177 EPB41P11171 864 aaKnown RBP12.77□□□□□ -0.37
PCDHGC3-201ENST00000308177 C11orf57Q6ZUT1 292 aaPredicted RBP12.77□□□□□ -0.37
PCDHGC3-201ENST00000308177 DBNDD1Q9H9R9 158 aa12.77□□□□□ -0.37
PCDHGC3-201ENST00000308177 PRDM10Q9NQV6 1147 aa12.77□□□□□ -0.37
PCDHGC3-201ENST00000308177 SWAP70Q9UH65 585 aa12.77□□□□□ -0.37
PCDHGC3-201ENST00000308177 PCDHA12Q9UN75 941 aa12.77□□□□□ -0.37
PCDHGC3-201ENST00000308177 ZNF609O15014 1411 aa12.76□□□□□ -0.37
PCDHGC3-201ENST00000308177 NEFHP12036 1026 aa12.76□□□□□ -0.37
PCDHGC3-201ENST00000308177 GPATCH4Q5T3I0 446 aaKnown RBP12.76□□□□□ -0.37
PCDHGC3-201ENST00000308177 MARCH10Q8NA82 808 aaPredicted RBP12.76□□□□□ -0.37
PCDHGC3-201ENST00000308177 CTNNBL1Q8WYA6 563 aaPredicted RBP12.76□□□□□ -0.37
PCDHGC3-201ENST00000308177 ARHGAP23Q9P227 1491 aa12.76□□□□□ -0.37
PCDHGC3-201ENST00000308177 GSG1L2A8MUP6 293 aa12.76□□□□□ -0.37
PCDHGC3-201ENST00000308177 IBSPP21815 317 aaPredicted RBP12.76□□□□□ -0.37
PCDHGC3-201ENST00000308177 AFF2P51816 1311 aa12.76□□□□□ -0.37
PCDHGC3-201ENST00000308177 ADRA2BP18089 450 aa12.76□□□□□ -0.37
PCDHGC3-201ENST00000308177 ASPRV1Q53RT3 343 aa12.76□□□□□ -0.37
PCDHGC3-201ENST00000308177 ZNF772Q68DY9 489 aaPredicted RBP12.76□□□□□ -0.37
PCDHGC3-201ENST00000308177 DGKHQ86XP1 1220 aa12.76□□□□□ -0.37
PCDHGC3-201ENST00000308177 KRT222Q8N1A0 295 aa12.76□□□□□ -0.37
PCDHGC3-201ENST00000308177 KIFC2Q96AC6 838 aa12.76□□□□□ -0.37
PCDHGC3-201ENST00000308177 ERO1AQ96HE7 468 aa12.76□□□□□ -0.37
PCDHGC3-201ENST00000308177 TBC1D7Q9P0N9 293 aa12.76□□□□□ -0.37
PCDHGC3-201ENST00000308177 FRMD4BQ9Y2L6 1034 aa12.76□□□□□ -0.37
PCDHGC3-201ENST00000308177 SPATA31A1Q5TZJ5 1347 aa12.76□□□□□ -0.37
PCDHGC3-201ENST00000308177 ARHGEF35A5YM69 484 aa12.76□□□□□ -0.37
PCDHGC3-201ENST00000308177 TCP10L2B9ZVM9 353 aa12.76□□□□□ -0.37
PCDHGC3-201ENST00000308177 TUBB4BP68371 445 aa12.76□□□□□ -0.37
PCDHGC3-201ENST00000308177 RAPGEF1Q13905 1077 aa12.76□□□□□ -0.37
PCDHGC3-201ENST00000308177 TMED8Q6PL24 325 aaPredicted RBP12.76□□□□□ -0.37
PCDHGC3-201ENST00000308177 PHACTR2O75167 634 aa12.75□□□□□ -0.37
PCDHGC3-201ENST00000308177 TTLL1O95922 423 aa12.75□□□□□ -0.37
PCDHGC3-201ENST00000308177 CAPZA3Q96KX2 299 aa12.75□□□□□ -0.37
PCDHGC3-201ENST00000308177 GSDMAQ96QA5 445 aa12.75□□□□□ -0.37
PCDHGC3-201ENST00000308177 PCDHA1Q9Y5I3 950 aa12.75□□□□□ -0.37
PCDHGC3-201ENST00000308177 NCOA3Q9Y6Q9 1424 aa12.75□□□□□ -0.37
PCDHGC3-201ENST00000308177 USP17L3A6NCW0 530 aa12.75□□□□□ -0.37
PCDHGC3-201ENST00000308177 USP17L4A6NCW7 530 aa12.75□□□□□ -0.37
PCDHGC3-201ENST00000308177 NT5C2P49902 561 aa12.75□□□□□ -0.37
PCDHGC3-201ENST00000308177 ADKP55263 362 aaKnown RBP12.75□□□□□ -0.37
PCDHGC3-201ENST00000308177 IFFO1Q0D2I5 559 aa12.75□□□□□ -0.37
PCDHGC3-201ENST00000308177 SPATA1Q5VX52 437 aa12.75□□□□□ -0.37
PCDHGC3-201ENST00000308177 USP17L1Q7RTZ2 530 aa12.75□□□□□ -0.37
PCDHGC3-201ENST00000308177 MYRIPQ8NFW9 859 aa12.75□□□□□ -0.37
PCDHGC3-201ENST00000308177 FAM84BQ96KN1 310 aaPredicted RBP12.75□□□□□ -0.37
PCDHGC3-201ENST00000308177 PCDHB6Q9Y5E3 794 aa12.75□□□□□ -0.37
PCDHGC3-201ENST00000308177 MEGF6O75095 1541 aa12.75□□□□□ -0.37
PCDHGC3-201ENST00000308177 CAMTA2O94983 1202 aa12.75□□□□□ -0.37
PCDHGC3-201ENST00000308177 ERCC3P19447 782 aa12.75□□□□□ -0.37
PCDHGC3-201ENST00000308177 EXOSC10Q01780 885 aaKnown RBP12.75□□□□□ -0.37
PCDHGC3-201ENST00000308177 SEPT7Q16181 437 aaKnown RBP12.75□□□□□ -0.37
PCDHGC3-201ENST00000308177 ABCB5Q2M3G0 1257 aa12.75□□□□□ -0.37
PCDHGC3-201ENST00000308177 MCTP2Q6DN12 878 aa12.75□□□□□ -0.37
PCDHGC3-201ENST00000308177 NSMFQ6X4W1 530 aa12.75□□□□□ -0.37
PCDHGC3-201ENST00000308177 CCDC84Q86UT8 332 aaPredicted RBP12.75□□□□□ -0.37
PCDHGC3-201ENST00000308177 LRRC8AQ8IWT6 810 aa12.75□□□□□ -0.37
PCDHGC3-201ENST00000308177 NELFCDQ8IXH7 590 aa12.75□□□□□ -0.37
PCDHGC3-201ENST00000308177 LMBR1Q8WVP7 490 aa12.75□□□□□ -0.37
PCDHGC3-201ENST00000308177 MTA3Q9BTC8 594 aa12.75□□□□□ -0.37
PCDHGC3-201ENST00000308177 SELENOOQ9BVL4 669 aa12.75□□□□□ -0.37
PCDHGC3-201ENST00000308177 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.75□□□□□ -0.37
PCDHGC3-201ENST00000308177 DCCP43146 1447 aa12.75□□□□□ -0.37
PCDHGC3-201ENST00000308177 KIAA0754O94854 1291 aa12.74□□□□□ -0.37
PCDHGC3-201ENST00000308177 MCM6Q14566 821 aa12.74□□□□□ -0.37
PCDHGC3-201ENST00000308177 FBXO11Q86XK2 927 aa12.74□□□□□ -0.37
PCDHGC3-201ENST00000308177 PGBD1Q96JS3 809 aa12.74□□□□□ -0.37
PCDHGC3-201ENST00000308177 DNAI2Q9GZS0 605 aa12.74□□□□□ -0.37
PCDHGC3-201ENST00000308177 COA1Q9GZY4 146 aa12.74□□□□□ -0.37
PCDHGC3-201ENST00000308177 LY9Q9HBG7 655 aa12.74□□□□□ -0.37
PCDHGC3-201ENST00000308177 PLEKHA8P1O95397 391 aa12.74□□□□□ -0.37
PCDHGC3-201ENST00000308177 RPN1P04843 607 aaKnown RBP12.74□□□□□ -0.37
PCDHGC3-201ENST00000308177 MMP10P09238 476 aa12.74□□□□□ -0.37
PCDHGC3-201ENST00000308177 CYP2D6P10635 497 aa12.74□□□□□ -0.37
PCDHGC3-201ENST00000308177 NPR1P16066 1061 aa12.74□□□□□ -0.37
PCDHGC3-201ENST00000308177 MORC3Q14149 939 aa12.74□□□□□ -0.37
PCDHGC3-201ENST00000308177 CTR9Q6PD62 1173 aa12.74□□□□□ -0.37
PCDHGC3-201ENST00000308177 DCP1AQ9NPI6 582 aaPredicted RBP12.74□□□□□ -0.37
PCDHGC3-201ENST00000308177 KDM3AQ9Y4C1 1321 aa12.74□□□□□ -0.37
PCDHGC3-201ENST00000308177 MYCLP12524 364 aaPredicted RBP12.74□□□□□ -0.37
PCDHGC3-201ENST00000308177 TERF1P54274 439 aa12.74□□□□□ -0.37
PCDHGC3-201ENST00000308177 TNFAIP1Q13829 316 aa12.74□□□□□ -0.37
PCDHGC3-201ENST00000308177 PRR16Q569H4 304 aa12.74□□□□□ -0.37
PCDHGC3-201ENST00000308177 USP17L2Q6R6M4 530 aa12.74□□□□□ -0.37
PCDHGC3-201ENST00000308177 HOOK2Q96ED9 719 aa12.74□□□□□ -0.37
PCDHGC3-201ENST00000308177 TAOK3Q9H2K8 898 aa12.74□□□□□ -0.37
PCDHGC3-201ENST00000308177 TMOD4Q9NZQ9 345 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms