RNA–Protein interactions for RNA: ENST00000272395.2

TRIM43-201, Transcript of tripartite motif containing 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM43, Length 1,682 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43-201ENST00000272395 STRBPQ96SI9 672 aaKnown RBP10.02□□□□□ -0.81
TRIM43-201ENST00000272395 CRNKL1Q9BZJ0 848 aaKnown RBP10.02□□□□□ -0.81
TRIM43-201ENST00000272395 OSBPL5Q9H0X9 879 aaPredicted RBP10.02□□□□□ -0.81
TRIM43-201ENST00000272395 SLC4A4Q9Y6R1 1079 aa10.02□□□□□ -0.81
TRIM43-201ENST00000272395 A0A1B0GVL5 298 aa10.01□□□□□ -0.81
TRIM43-201ENST00000272395 IKBKBO14920 756 aa10.01□□□□□ -0.81
TRIM43-201ENST00000272395 ZBTB43O43298 467 aa10.01□□□□□ -0.81
TRIM43-201ENST00000272395 ENTPD3O75355 529 aa10.01□□□□□ -0.81
TRIM43-201ENST00000272395 ZNF202O95125 648 aa10.01□□□□□ -0.81
TRIM43-201ENST00000272395 POLR3DP05423 398 aaPredicted RBP10.01□□□□□ -0.81
TRIM43-201ENST00000272395 GNAT2P19087 354 aa10.01□□□□□ -0.81
TRIM43-201ENST00000272395 KCNJ6P48051 423 aa10.01□□□□□ -0.81
TRIM43-201ENST00000272395 RCAN1P53805 252 aa10.01□□□□□ -0.81
TRIM43-201ENST00000272395 C1QTNF8P60827 252 aa10.01□□□□□ -0.81
TRIM43-201ENST00000272395 HTRA3P83110 453 aa10.01□□□□□ -0.81
TRIM43-201ENST00000272395 TRIM29Q14134 588 aa10.01□□□□□ -0.81
TRIM43-201ENST00000272395 CCDC144BQ3MJ40 725 aa10.01□□□□□ -0.81
TRIM43-201ENST00000272395 FAM83AQ86UY5 434 aa10.01□□□□□ -0.81
TRIM43-201ENST00000272395 TBC1D10CQ8IV04 446 aa10.01□□□□□ -0.81
TRIM43-201ENST00000272395 CCDC144CPQ8IYA2 1237 aa10.01□□□□□ -0.81
TRIM43-201ENST00000272395 ELOA2Q8IYF1 753 aaPredicted RBP10.01□□□□□ -0.81
TRIM43-201ENST00000272395 ZNF710Q8N1W2 664 aa10.01□□□□□ -0.81
TRIM43-201ENST00000272395 AOPEPQ8N6M6 819 aa10.01□□□□□ -0.81
TRIM43-201ENST00000272395 ANKRD7Q92527 254 aa10.01□□□□□ -0.81
TRIM43-201ENST00000272395 ALG1Q9BT22 464 aa10.01□□□□□ -0.81
TRIM43-201ENST00000272395 PPP2R3BQ9Y5P8 575 aa10.01□□□□□ -0.81
TRIM43-201ENST00000272395 NEDD4P46934 1319 aa10.01□□□□□ -0.81
TRIM43-201ENST00000272395 FAM196BA6NMK8 535 aa10□□□□□ -0.81
TRIM43-201ENST00000272395 PATL2C9JE40 543 aaKnown RBP10□□□□□ -0.81
TRIM43-201ENST00000272395 NRDCO43847 1150 aa10□□□□□ -0.81
TRIM43-201ENST00000272395 TUBB4AP04350 444 aa10□□□□□ -0.81
TRIM43-201ENST00000272395 CYP2D6P10635 497 aa10□□□□□ -0.81
TRIM43-201ENST00000272395 SKILP12757 684 aa10□□□□□ -0.81
TRIM43-201ENST00000272395 TNNT1P13805 278 aa10□□□□□ -0.81
TRIM43-201ENST00000272395 U2AF2P26368 475 aaKnown RBP eCLIP10□□□□□ -0.81
TRIM43-201ENST00000272395 TPD52L1Q16890 204 aaPredicted RBP10□□□□□ -0.81
TRIM43-201ENST00000272395 MIGA2Q7L4E1 593 aa10□□□□□ -0.81
TRIM43-201ENST00000272395 CCDC150Q8NCX0 1101 aa10□□□□□ -0.81
TRIM43-201ENST00000272395 IGDCC4Q8TDY8 1250 aa10□□□□□ -0.81
TRIM43-201ENST00000272395 KRT23Q9C075 422 aa10□□□□□ -0.81
TRIM43-201ENST00000272395 EIF4ENIF1Q9NRA8 985 aaKnown RBP10□□□□□ -0.81
TRIM43-201ENST00000272395 CYP2D7A0A087X1C5 515 aa9.99□□□□□ -0.81
TRIM43-201ENST00000272395 CCDC69A6NI79 296 aa9.99□□□□□ -0.81
TRIM43-201ENST00000272395 KIF28PB7ZC32 967 aa9.99□□□□□ -0.81
TRIM43-201ENST00000272395 SMIM22K7EJ46 135 aa9.99□□□□□ -0.81
TRIM43-201ENST00000272395 CUTAO60888 179 aa9.99□□□□□ -0.81
TRIM43-201ENST00000272395 APPP05067 770 aa9.99□□□□□ -0.81
TRIM43-201ENST00000272395 PFKFB1P16118 471 aa9.99□□□□□ -0.81
TRIM43-201ENST00000272395 TTLL12Q14166 644 aaPredicted RBP9.99□□□□□ -0.81
TRIM43-201ENST00000272395 KRT40Q6A162 431 aa9.99□□□□□ -0.81
TRIM43-201ENST00000272395 OTUD7BQ6GQQ9 843 aa9.99□□□□□ -0.81
TRIM43-201ENST00000272395 CYB5R4Q7L1T6 521 aa9.99□□□□□ -0.81
TRIM43-201ENST00000272395 CERS3Q8IU89 383 aa9.99□□□□□ -0.81
TRIM43-201ENST00000272395 TMTC2Q8N394 836 aa9.99□□□□□ -0.81
TRIM43-201ENST00000272395 C16orf45Q96MC5 204 aaPredicted RBP9.99□□□□□ -0.81
TRIM43-201ENST00000272395 CSRNP1Q96S65 589 aa9.99□□□□□ -0.81
TRIM43-201ENST00000272395 EPB41L4AQ9HCS5 686 aaPredicted RBP9.99□□□□□ -0.81
TRIM43-201ENST00000272395 DCP1AQ9NPI6 582 aaPredicted RBP9.99□□□□□ -0.81
TRIM43-201ENST00000272395 MKRN1Q9UHC7 482 aaKnown RBP9.99□□□□□ -0.81
TRIM43-201ENST00000272395 TUBE1Q9UJT0 475 aa9.99□□□□□ -0.81
TRIM43-201ENST00000272395 HPSEQ9Y251 543 aa9.99□□□□□ -0.81
TRIM43-201ENST00000272395 GSG1L2A8MUP6 293 aa9.99□□□□□ -0.81
TRIM43-201ENST00000272395 B4E1Z4 1266 aa9.99□□□□□ -0.81
TRIM43-201ENST00000272395 UBE2Q2LH0YL09 131 aa9.99□□□□□ -0.81
TRIM43-201ENST00000272395 SYKP43405 635 aa9.99□□□□□ -0.81
TRIM43-201ENST00000272395 APLP1P51693 650 aa9.99□□□□□ -0.81
TRIM43-201ENST00000272395 CCZ1BP86790 482 aa9.99□□□□□ -0.81
TRIM43-201ENST00000272395 CCZ1P86791 482 aaPredicted RBP9.99□□□□□ -0.81
TRIM43-201ENST00000272395 GNL2Q13823 731 aaKnown RBP9.99□□□□□ -0.81
TRIM43-201ENST00000272395 SART3Q15020 963 aaKnown RBP9.99□□□□□ -0.81
TRIM43-201ENST00000272395 PTPAQ15257 358 aa9.99□□□□□ -0.81
TRIM43-201ENST00000272395 NTRK3Q16288 839 aa9.99□□□□□ -0.81
TRIM43-201ENST00000272395 DPCR1Q3MIW9 517 aa9.99□□□□□ -0.81
TRIM43-201ENST00000272395 TMEM67Q5HYA8 995 aa9.99□□□□□ -0.81
TRIM43-201ENST00000272395 CEP135Q66GS9 1140 aa9.99□□□□□ -0.81
TRIM43-201ENST00000272395 NYAP1Q6ZVC0 841 aa9.99□□□□□ -0.81
TRIM43-201ENST00000272395 CCDC112Q8NEF3 446 aa9.99□□□□□ -0.81
TRIM43-201ENST00000272395 NACAP1Q9BZK3 213 aa9.99□□□□□ -0.81
TRIM43-201ENST00000272395 NAPBQ9H115 298 aa9.99□□□□□ -0.81
TRIM43-201ENST00000272395 LY9Q9HBG7 655 aa9.99□□□□□ -0.81
TRIM43-201ENST00000272395 GBA2Q9HCG7 927 aaPredicted RBP9.99□□□□□ -0.81
TRIM43-201ENST00000272395 MCM9Q9NXL9 1143 aa9.99□□□□□ -0.81
TRIM43-201ENST00000272395 ATRNL1Q5VV63 1379 aa9.98□□□□□ -0.81
TRIM43-201ENST00000272395 TMEM88BA6NKF7 163 aa9.98□□□□□ -0.81
TRIM43-201ENST00000272395 GOLGA8AA7E2F4 631 aa9.98□□□□□ -0.81
TRIM43-201ENST00000272395 FMNL1O95466 1100 aaPredicted RBP9.98□□□□□ -0.81
TRIM43-201ENST00000272395 IFNAR1P17181 557 aa9.98□□□□□ -0.81
TRIM43-201ENST00000272395 NF2P35240 595 aa9.98□□□□□ -0.81
TRIM43-201ENST00000272395 PLCD1P51178 756 aa9.98□□□□□ -0.81
TRIM43-201ENST00000272395 SSRP1Q08945 709 aaKnown RBP9.98□□□□□ -0.81
TRIM43-201ENST00000272395 PPP2R5BQ15173 497 aa9.98□□□□□ -0.81
TRIM43-201ENST00000272395 PTPN14Q15678 1187 aa9.98□□□□□ -0.81
TRIM43-201ENST00000272395 SUPT20HL1Q3ZLR7 823 aa9.98□□□□□ -0.81
TRIM43-201ENST00000272395 AKNAD1Q5T1N1 836 aa9.98□□□□□ -0.81
TRIM43-201ENST00000272395 RESP18Q5W5W9 173 aa9.98□□□□□ -0.81
TRIM43-201ENST00000272395 NFXL1Q6ZNB6 911 aa9.98□□□□□ -0.81
TRIM43-201ENST00000272395 SMAP1Q8IYB5 467 aaPredicted RBP9.98□□□□□ -0.81
TRIM43-201ENST00000272395 IFNL3Q8IZI9 196 aa9.98□□□□□ -0.81
TRIM43-201ENST00000272395 PDCL2Q8N4E4 241 aa9.98□□□□□ -0.81
TRIM43-201ENST00000272395 MAP3K14Q99558 947 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms