RNA–Protein interactions for RNA: ENST00000257765.9

KHDC1-201, Transcript of KH domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene KHDC1, Length 1,134 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1-201ENST00000257765 SLC25A27O95847 323 aa22.23■■□□□ 1.15
KHDC1-201ENST00000257765 FCER1AP12319 257 aa22.23■■□□□ 1.15
KHDC1-201ENST00000257765 UBE3CQ15386 1083 aa22.23■■□□□ 1.15
KHDC1-201ENST00000257765 MAML3Q96JK9 1138 aa22.23■■□□□ 1.15
KHDC1-201ENST00000257765 CHMP4BQ9H444 224 aaKnown RBP22.23■■□□□ 1.15
KHDC1-201ENST00000257765 MYCNP04198 464 aaPredicted RBP22.22■■□□□ 1.15
KHDC1-201ENST00000257765 TMEM132BQ14DG7 1078 aa22.22■■□□□ 1.15
KHDC1-201ENST00000257765 SLC39A5Q6ZMH5 540 aa22.22■■□□□ 1.15
KHDC1-201ENST00000257765 SLC4A4Q9Y6R1 1079 aa22.22■■□□□ 1.15
KHDC1-201ENST00000257765 SMCHD1A6NHR9 2005 aa22.21■■□□□ 1.15
KHDC1-201ENST00000257765 CHGBP05060 677 aa22.21■■□□□ 1.15
KHDC1-201ENST00000257765 EEF2P13639 858 aaKnown RBP22.21■■□□□ 1.15
KHDC1-201ENST00000257765 PRAMEF19Q5SWL8 479 aa22.21■■□□□ 1.15
KHDC1-201ENST00000257765 ZSCAN25Q6NSZ9 544 aa22.21■■□□□ 1.15
KHDC1-201ENST00000257765 KANSL2Q9H9L4 492 aa22.21■■□□□ 1.15
KHDC1-201ENST00000257765 SNX17Q15036 470 aa22.2■■□□□ 1.14
KHDC1-201ENST00000257765 FAM47AQ5JRC9 791 aa22.2■■□□□ 1.14
KHDC1-201ENST00000257765 MMP19Q99542 508 aa22.2■■□□□ 1.14
KHDC1-201ENST00000257765 GOPCQ9HD26 462 aa22.2■■□□□ 1.14
KHDC1-201ENST00000257765 PRDM5Q9NQX1 630 aaPredicted RBP22.2■■□□□ 1.14
KHDC1-201ENST00000257765 FBXO28Q9NVF7 368 aa22.2■■□□□ 1.14
KHDC1-201ENST00000257765 ADAMTS5Q9UNA0 930 aa22.2■■□□□ 1.14
KHDC1-201ENST00000257765 LRRC41Q15345 812 aa22.19■■□□□ 1.14
KHDC1-201ENST00000257765 TRIM60Q495X7 471 aa22.19■■□□□ 1.14
KHDC1-201ENST00000257765 FAM109BQ6ICB4 259 aaPredicted RBP22.19■■□□□ 1.14
KHDC1-201ENST00000257765 CTR9Q6PD62 1173 aa22.19■■□□□ 1.14
KHDC1-201ENST00000257765 RIOX2Q8IUF8 465 aa22.19■■□□□ 1.14
KHDC1-201ENST00000257765 ARPP21Q9UBL0 812 aaPredicted RBP22.19■■□□□ 1.14
KHDC1-201ENST00000257765 NRBP1Q9UHY1 535 aa22.19■■□□□ 1.14
KHDC1-201ENST00000257765 POTEB2H3BUK9 544 aa22.18■■□□□ 1.14
KHDC1-201ENST00000257765 RAD21O60216 631 aa22.18■■□□□ 1.14
KHDC1-201ENST00000257765 ADCYAP1R1P41586 468 aa22.18■■□□□ 1.14
KHDC1-201ENST00000257765 KCTD2Q14681 263 aa22.18■■□□□ 1.14
KHDC1-201ENST00000257765 DIEXFQ68CQ4 756 aaKnown RBP22.18■■□□□ 1.14
KHDC1-201ENST00000257765 LRRCC1Q9C099 1032 aa22.18■■□□□ 1.14
KHDC1-201ENST00000257765 PUS7LQ9H0K6 701 aaKnown RBP22.18■■□□□ 1.14
KHDC1-201ENST00000257765 PPP1R9AQ9ULJ8 1098 aa22.18■■□□□ 1.14
KHDC1-201ENST00000257765 ROBO3Q96MS0 1386 aa22.17■■□□□ 1.14
KHDC1-201ENST00000257765 VWA5AO00534 786 aa22.17■■□□□ 1.14
KHDC1-201ENST00000257765 COPB2P35606 906 aa22.17■■□□□ 1.14
KHDC1-201ENST00000257765 FAM83BQ5T0W9 1011 aa22.17■■□□□ 1.14
KHDC1-201ENST00000257765 FERMT2Q96AC1 680 aa22.17■■□□□ 1.14
KHDC1-201ENST00000257765 XPNPEP3Q9NQH7 507 aa22.17■■□□□ 1.14
KHDC1-201ENST00000257765 PDLIM7Q9NR12 457 aa22.17■■□□□ 1.14
KHDC1-201ENST00000257765 MYH4Q9Y623 1939 aa22.17■■□□□ 1.14
KHDC1-201ENST00000257765 PGK2P07205 417 aa22.16■■□□□ 1.14
KHDC1-201ENST00000257765 RARBP10826 455 aa22.16■■□□□ 1.14
KHDC1-201ENST00000257765 STAT3P40763 770 aa22.16■■□□□ 1.14
KHDC1-201ENST00000257765 C1orf53Q5VUE5 145 aa22.16■■□□□ 1.14
KHDC1-201ENST00000257765 GUCD1Q96NT3 240 aa22.16■■□□□ 1.14
KHDC1-201ENST00000257765 TINF2Q9BSI4 451 aa22.16■■□□□ 1.14
KHDC1-201ENST00000257765 ZNF214Q9UL59 606 aaPredicted RBP22.16■■□□□ 1.14
KHDC1-201ENST00000257765 DIS3Q9Y2L1 958 aaKnown RBP22.16■■□□□ 1.14
KHDC1-201ENST00000257765 ZNF792Q3KQV3 632 aa22.15■■□□□ 1.14
KHDC1-201ENST00000257765 ZNF697Q5TEC3 545 aa22.15■■□□□ 1.14
KHDC1-201ENST00000257765 REPS2Q8NFH8 660 aa22.15■■□□□ 1.14
KHDC1-201ENST00000257765 BADQ92934 168 aa22.15■■□□□ 1.14
KHDC1-201ENST00000257765 PHF24Q9UPV7 400 aa22.15■■□□□ 1.14
KHDC1-201ENST00000257765 SMARCA5O60264 1052 aaPredicted RBP22.14■■□□□ 1.13
KHDC1-201ENST00000257765 SHHQ15465 462 aa22.14■■□□□ 1.13
KHDC1-201ENST00000257765 RNF180Q86T96 592 aa22.14■■□□□ 1.13
KHDC1-201ENST00000257765 FAM161BQ96MY7 647 aa22.14■■□□□ 1.13
KHDC1-201ENST00000257765 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.14■■□□□ 1.13
KHDC1-201ENST00000257765 SBK1Q52WX2 424 aa22.13■■□□□ 1.13
KHDC1-201ENST00000257765 C9orf50Q5SZB4 431 aa22.13■■□□□ 1.13
KHDC1-201ENST00000257765 STRBPQ96SI9 672 aaKnown RBP22.13■■□□□ 1.13
KHDC1-201ENST00000257765 SLF1Q9BQI6 1058 aa22.13■■□□□ 1.13
KHDC1-201ENST00000257765 ECHDC1Q9NTX5 307 aa22.13■■□□□ 1.13
KHDC1-201ENST00000257765 RCAN3Q9UKA8 241 aa22.13■■□□□ 1.13
KHDC1-201ENST00000257765 PGK1P00558 417 aa22.12■■□□□ 1.13
KHDC1-201ENST00000257765 AKR1A1P14550 325 aa22.12■■□□□ 1.13
KHDC1-201ENST00000257765 RASA1P20936 1047 aa22.12■■□□□ 1.13
KHDC1-201ENST00000257765 TLE2Q04725 743 aa22.12■■□□□ 1.13
KHDC1-201ENST00000257765 SH3RF1Q7Z6J0 888 aa22.12■■□□□ 1.13
KHDC1-201ENST00000257765 TEX13BQ9BXU2 312 aa22.12■■□□□ 1.13
KHDC1-201ENST00000257765 MKNK2Q9HBH9 465 aa22.12■■□□□ 1.13
KHDC1-201ENST00000257765 CNPY2Q9Y2B0 182 aa22.12■■□□□ 1.13
KHDC1-201ENST00000257765 CUL9Q8IWT3 2517 aa22.11■■□□□ 1.13
KHDC1-201ENST00000257765 TRIM43BA6NCK2 446 aa22.11■■□□□ 1.13
KHDC1-201ENST00000257765 ZNF865P0CJ78 1059 aaPredicted RBP22.11■■□□□ 1.13
KHDC1-201ENST00000257765 TAL1P17542 331 aaPredicted RBP22.11■■□□□ 1.13
KHDC1-201ENST00000257765 GIMAP6Q6P9H5 292 aa22.11■■□□□ 1.13
KHDC1-201ENST00000257765 STK11IPQ8N1F8 1099 aa22.11■■□□□ 1.13
KHDC1-201ENST00000257765 TRIM43Q96BQ3 446 aaPredicted RBP22.11■■□□□ 1.13
KHDC1-201ENST00000257765 NUP88Q99567 741 aaPredicted RBP22.11■■□□□ 1.13
KHDC1-201ENST00000257765 NYAP2Q9P242 653 aa22.11■■□□□ 1.13
KHDC1-201ENST00000257765 LAMA2P24043 3122 aaKnown RBP22.1■■□□□ 1.13
KHDC1-201ENST00000257765 GSG1L2A8MUP6 293 aa22.1■■□□□ 1.13
KHDC1-201ENST00000257765 MINDY4BA8MYZ0 360 aa22.1■■□□□ 1.13
KHDC1-201ENST00000257765 CLTBP09497 229 aa22.1■■□□□ 1.13
KHDC1-201ENST00000257765 SNRNP48Q6IEG0 339 aaKnown RBP22.1■■□□□ 1.13
KHDC1-201ENST00000257765 KBTBD3Q8NAB2 608 aa22.1■■□□□ 1.13
KHDC1-201ENST00000257765 APPBP2Q92624 585 aa22.1■■□□□ 1.13
KHDC1-201ENST00000257765 TACC3Q9Y6A5 838 aa22.1■■□□□ 1.13
KHDC1-201ENST00000257765 A0A1W2PQ45 241 aaPredicted RBP22.09■■□□□ 1.13
KHDC1-201ENST00000257765 A0A1W2PQY0 241 aa22.09■■□□□ 1.13
KHDC1-201ENST00000257765 F5H6K3 240 aa22.09■■□□□ 1.13
KHDC1-201ENST00000257765 NDUFB10O96000 172 aa22.09■■□□□ 1.13
KHDC1-201ENST00000257765 KLRC3Q07444 240 aa22.09■■□□□ 1.13
KHDC1-201ENST00000257765 PHF6Q8IWS0 365 aaKnown RBP eCLIP22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms