RNA–Protein interactions for RNA: ENST00000013807.9

ERCC1-201, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 1,278 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-201ENST00000013807 TRPV1Q8NER1 839 aa19.03■□□□□ 0.64
ERCC1-201ENST00000013807 GOPCQ9HD26 462 aa19.03■□□□□ 0.64
ERCC1-201ENST00000013807 NYAP2Q9P242 653 aa19.03■□□□□ 0.64
ERCC1-201ENST00000013807 RASA1P20936 1047 aa19.02■□□□□ 0.64
ERCC1-201ENST00000013807 GPR153Q6NV75 609 aa19.02■□□□□ 0.64
ERCC1-201ENST00000013807 PCDHB15Q9Y5E8 787 aa19.02■□□□□ 0.64
ERCC1-201ENST00000013807 DNM1LO00429 736 aa19.01■□□□□ 0.63
ERCC1-201ENST00000013807 LRRC26Q2I0M4 334 aa19.01■□□□□ 0.63
ERCC1-201ENST00000013807 LRRFIP1Q32MZ4 808 aaKnown RBP19.01■□□□□ 0.63
ERCC1-201ENST00000013807 RIOX2Q8IUF8 465 aa19.01■□□□□ 0.63
ERCC1-201ENST00000013807 REPS2Q8NFH8 660 aa19.01■□□□□ 0.63
ERCC1-201ENST00000013807 MKL1Q969V6 931 aa19.01■□□□□ 0.63
ERCC1-201ENST00000013807 NRBP1Q9UHY1 535 aa19.01■□□□□ 0.63
ERCC1-201ENST00000013807 ZNF214Q9UL59 606 aaPredicted RBP19.01■□□□□ 0.63
ERCC1-201ENST00000013807 PPP1R9AQ9ULJ8 1098 aa19.01■□□□□ 0.63
ERCC1-201ENST00000013807 SYNPO2Q9UMS6 1093 aa19.01■□□□□ 0.63
ERCC1-201ENST00000013807 DIS3Q9Y2L1 958 aaKnown RBP19.01■□□□□ 0.63
ERCC1-201ENST00000013807 IGKV6D-41A0A0C4DH26 115 aa19■□□□□ 0.63
ERCC1-201ENST00000013807 PATL2C9JE40 543 aaKnown RBP19■□□□□ 0.63
ERCC1-201ENST00000013807 VWA5AO00534 786 aa19■□□□□ 0.63
ERCC1-201ENST00000013807 SEPT4O43236 478 aa19■□□□□ 0.63
ERCC1-201ENST00000013807 GPAA1O43292 621 aa19■□□□□ 0.63
ERCC1-201ENST00000013807 FCER1AP12319 257 aa19■□□□□ 0.63
ERCC1-201ENST00000013807 PI4K2BQ8TCG2 481 aa19■□□□□ 0.63
ERCC1-201ENST00000013807 MAML3Q96JK9 1138 aa19■□□□□ 0.63
ERCC1-201ENST00000013807 FBXO28Q9NVF7 368 aa19■□□□□ 0.63
ERCC1-201ENST00000013807 ZMYND8Q9ULU4 1186 aaPredicted RBP19■□□□□ 0.63
ERCC1-201ENST00000013807 COPB2P35606 906 aa18.99■□□□□ 0.63
ERCC1-201ENST00000013807 MAGEA10P43363 369 aaPredicted RBP18.99■□□□□ 0.63
ERCC1-201ENST00000013807 PLS1Q14651 629 aa18.99■□□□□ 0.63
ERCC1-201ENST00000013807 LRIT3Q3SXY7 679 aa18.99■□□□□ 0.63
ERCC1-201ENST00000013807 NCAPG2Q86XI2 1143 aa18.99■□□□□ 0.63
ERCC1-201ENST00000013807 ARRDC4Q8NCT1 418 aa18.99■□□□□ 0.63
ERCC1-201ENST00000013807 MKNK2Q9HBH9 465 aa18.99■□□□□ 0.63
ERCC1-201ENST00000013807 ZNF287Q9HBT7 754 aa18.99■□□□□ 0.63
ERCC1-201ENST00000013807 EPB41L4AQ9HCS5 686 aaPredicted RBP18.99■□□□□ 0.63
ERCC1-201ENST00000013807 F5H6K3 240 aa18.98■□□□□ 0.63
ERCC1-201ENST00000013807 SOX1O00570 391 aaPredicted RBP18.98■□□□□ 0.63
ERCC1-201ENST00000013807 ERC2O15083 957 aa18.98■□□□□ 0.63
ERCC1-201ENST00000013807 CNGA1P29973 690 aa18.98■□□□□ 0.63
ERCC1-201ENST00000013807 STAT3P40763 770 aa18.98■□□□□ 0.63
ERCC1-201ENST00000013807 KLRC3Q07444 240 aa18.98■□□□□ 0.63
ERCC1-201ENST00000013807 TSHZ3Q63HK5 1081 aa18.98■□□□□ 0.63
ERCC1-201ENST00000013807 IFNL3Q8IZI9 196 aa18.98■□□□□ 0.63
ERCC1-201ENST00000013807 SALL3Q9BXA9 1300 aa18.98■□□□□ 0.63
ERCC1-201ENST00000013807 COL6A3P12111 3177 aa18.97■□□□□ 0.63
ERCC1-201ENST00000013807 MINDY4BA8MYZ0 360 aa18.97■□□□□ 0.63
ERCC1-201ENST00000013807 M0R2C6 588 aa18.97■□□□□ 0.63
ERCC1-201ENST00000013807 ATP2A1O14983 1001 aa18.97■□□□□ 0.63
ERCC1-201ENST00000013807 SYN1P17600 705 aa18.97■□□□□ 0.63
ERCC1-201ENST00000013807 FAM83BQ5T0W9 1011 aa18.97■□□□□ 0.63
ERCC1-201ENST00000013807 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.97■□□□□ 0.63
ERCC1-201ENST00000013807 SENP6Q9GZR1 1112 aaPredicted RBP18.97■□□□□ 0.63
ERCC1-201ENST00000013807 LTBP2Q14767 1821 aa18.97■□□□□ 0.63
ERCC1-201ENST00000013807 PLIN4Q96Q06 1357 aa18.96■□□□□ 0.63
ERCC1-201ENST00000013807 SNX17Q15036 470 aa18.96■□□□□ 0.63
ERCC1-201ENST00000013807 ZNF792Q3KQV3 632 aa18.96■□□□□ 0.63
ERCC1-201ENST00000013807 TDHQ8IZJ6 230 aa18.96■□□□□ 0.63
ERCC1-201ENST00000013807 PRPF38AQ8NAV1 312 aaKnown RBP18.96■□□□□ 0.63
ERCC1-201ENST00000013807 SLF1Q9BQI6 1058 aa18.96■□□□□ 0.63
ERCC1-201ENST00000013807 MTMR4Q9NYA4 1195 aa18.96■□□□□ 0.63
ERCC1-201ENST00000013807 LAMA2P24043 3122 aaKnown RBP18.96■□□□□ 0.63
ERCC1-201ENST00000013807 MCM3APO60318 1980 aa18.95■□□□□ 0.62
ERCC1-201ENST00000013807 NDUFB10O96000 172 aa18.95■□□□□ 0.62
ERCC1-201ENST00000013807 ZMYM1Q5SVZ6 1142 aa18.95■□□□□ 0.62
ERCC1-201ENST00000013807 C1orf53Q5VUE5 145 aa18.95■□□□□ 0.62
ERCC1-201ENST00000013807 ZNF444Q8N0Y2 327 aaPredicted RBP18.95■□□□□ 0.62
ERCC1-201ENST00000013807 MSL3Q8N5Y2 521 aaKnown RBP18.95■□□□□ 0.62
ERCC1-201ENST00000013807 MMP19Q99542 508 aa18.95■□□□□ 0.62
ERCC1-201ENST00000013807 TDO2P48775 406 aa18.94■□□□□ 0.62
ERCC1-201ENST00000013807 KCTD2Q14681 263 aa18.94■□□□□ 0.62
ERCC1-201ENST00000013807 TICAM2Q86XR7 235 aa18.94■□□□□ 0.62
ERCC1-201ENST00000013807 GMCL1P1Q8NEA9 526 aa18.94■□□□□ 0.62
ERCC1-201ENST00000013807 NEDD1Q8NHV4 660 aa18.94■□□□□ 0.62
ERCC1-201ENST00000013807 LRCH3Q96II8 777 aa18.94■□□□□ 0.62
ERCC1-201ENST00000013807 TINF2Q9BSI4 451 aa18.94■□□□□ 0.62
ERCC1-201ENST00000013807 TEX13BQ9BXU2 312 aa18.94■□□□□ 0.62
ERCC1-201ENST00000013807 NACAP1Q9BZK3 213 aa18.94■□□□□ 0.62
ERCC1-201ENST00000013807 DNAJC25-GNG10A0A024R161 153 aa18.93■□□□□ 0.62
ERCC1-201ENST00000013807 TTLL1O95922 423 aa18.93■□□□□ 0.62
ERCC1-201ENST00000013807 APPP05067 770 aa18.93■□□□□ 0.62
ERCC1-201ENST00000013807 MX1P20591 662 aa18.93■□□□□ 0.62
ERCC1-201ENST00000013807 PRAMEF19Q5SWL8 479 aa18.93■□□□□ 0.62
ERCC1-201ENST00000013807 GJC2Q5T442 439 aaPredicted RBP18.93■□□□□ 0.62
ERCC1-201ENST00000013807 SLC39A5Q6ZMH5 540 aa18.93■□□□□ 0.62
ERCC1-201ENST00000013807 OTUD7AQ8TE49 926 aaPredicted RBP18.93■□□□□ 0.62
ERCC1-201ENST00000013807 CEP95Q96GE4 821 aa18.93■□□□□ 0.62
ERCC1-201ENST00000013807 SEC62Q99442 399 aaKnown RBP18.93■□□□□ 0.62
ERCC1-201ENST00000013807 UBE2OQ9C0C9 1292 aaKnown RBP18.93■□□□□ 0.62
ERCC1-201ENST00000013807 CLIP2Q9UDT6 1046 aa18.93■□□□□ 0.62
ERCC1-201ENST00000013807 RRP1P56182 461 aaKnown RBP18.92■□□□□ 0.62
ERCC1-201ENST00000013807 PDE4BQ07343 736 aa18.92■□□□□ 0.62
ERCC1-201ENST00000013807 LRRC41Q15345 812 aa18.92■□□□□ 0.62
ERCC1-201ENST00000013807 MAMDC4Q6UXC1 1216 aa18.92■□□□□ 0.62
ERCC1-201ENST00000013807 NUP88Q99567 741 aaPredicted RBP18.92■□□□□ 0.62
ERCC1-201ENST00000013807 SLC38A10Q9HBR0 1119 aa18.92■□□□□ 0.62
ERCC1-201ENST00000013807 KBTBD13C9JR72 458 aa18.91■□□□□ 0.62
ERCC1-201ENST00000013807 PRDM1O75626 825 aa18.91■□□□□ 0.62
ERCC1-201ENST00000013807 PGK2P07205 417 aa18.91■□□□□ 0.62
ERCC1-201ENST00000013807 ZNF865P0CJ78 1059 aaPredicted RBP18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms