RNA–Protein interactions for RNA: ENSMUST00000111051.9

Bdnf-210, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 4,125 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-210ENSMUST00000111051 AdnpQ9Z103 1108 aaKnown RBP9.35□□□□□ -0.91
Bdnf-210ENSMUST00000111051 Ppp2r3dQ9Z176 491 aa9.35□□□□□ -0.91
Bdnf-210ENSMUST00000111051 A0A1Y7VML8 143 aa9.35□□□□□ -0.91
Bdnf-210ENSMUST00000111051 Rnf40Q3U319 1001 aa9.35□□□□□ -0.91
Bdnf-210ENSMUST00000111051 Mtss1lQ6P9S0 715 aa9.35□□□□□ -0.91
Bdnf-210ENSMUST00000111051 RalylQ8BTF8 293 aa9.35□□□□□ -0.91
Bdnf-210ENSMUST00000111051 Fam161bQ8CB59 589 aa9.35□□□□□ -0.91
Bdnf-210ENSMUST00000111051 Ushbp1Q8R370 680 aa9.35□□□□□ -0.91
Bdnf-210ENSMUST00000111051 Rab3il1Q8VDV3 383 aa9.35□□□□□ -0.91
Bdnf-210ENSMUST00000111051 Lzts2Q91YU6 671 aa9.35□□□□□ -0.91
Bdnf-210ENSMUST00000111051 Kif17Q99PW8 1038 aa9.35□□□□□ -0.91
Bdnf-210ENSMUST00000111051 SarnpQ9D1J3 210 aaKnown RBP9.35□□□□□ -0.91
Bdnf-210ENSMUST00000111051 Cfap53Q9D439 514 aa9.35□□□□□ -0.91
Bdnf-210ENSMUST00000111051 Tagap1P0CAX8 505 aa9.34□□□□□ -0.91
Bdnf-210ENSMUST00000111051 Serpinc1P32261 465 aa9.34□□□□□ -0.91
Bdnf-210ENSMUST00000111051 Tcp11Q01755 566 aa9.34□□□□□ -0.91
Bdnf-210ENSMUST00000111051 Epha2Q03145 977 aa9.34□□□□□ -0.91
Bdnf-210ENSMUST00000111051 Arhgef2Q60875 985 aa9.34□□□□□ -0.91
Bdnf-210ENSMUST00000111051 Dpf2Q61103 391 aaKnown RBP9.34□□□□□ -0.91
Bdnf-210ENSMUST00000111051 Fgfr1opQ66JX5 399 aa9.34□□□□□ -0.91
Bdnf-210ENSMUST00000111051 Pabpc4Q6PHQ9 660 aaKnown RBP9.34□□□□□ -0.91
Bdnf-210ENSMUST00000111051 Rassf2Q8BMS9 326 aa9.34□□□□□ -0.91
Bdnf-210ENSMUST00000111051 Pak2Q8CIN4 524 aa9.34□□□□□ -0.91
Bdnf-210ENSMUST00000111051 Q8VDP2 222 aa9.34□□□□□ -0.91
Bdnf-210ENSMUST00000111051 Ube4aE9Q735 1028 aa9.34□□□□□ -0.91
Bdnf-210ENSMUST00000111051 Gjc1P28229 396 aa9.34□□□□□ -0.91
Bdnf-210ENSMUST00000111051 Stat5bP42232 786 aa9.34□□□□□ -0.91
Bdnf-210ENSMUST00000111051 Surf6P70279 355 aaKnown RBP9.34□□□□□ -0.91
Bdnf-210ENSMUST00000111051 Ppp1r7Q3UM45 361 aa9.34□□□□□ -0.91
Bdnf-210ENSMUST00000111051 Mybpc2Q5XKE0 1136 aa9.34□□□□□ -0.91
Bdnf-210ENSMUST00000111051 Tsga10Q6NY15 697 aa9.34□□□□□ -0.91
Bdnf-210ENSMUST00000111051 D130040H23RikQ8BII3 405 aa9.34□□□□□ -0.91
Bdnf-210ENSMUST00000111051 Pus7lQ8CE46 702 aa9.34□□□□□ -0.91
Bdnf-210ENSMUST00000111051 Myl6bQ8CI43 207 aa9.34□□□□□ -0.91
Bdnf-210ENSMUST00000111051 Eif4enif1Q9EST3 983 aaKnown RBP9.34□□□□□ -0.91
Bdnf-210ENSMUST00000111051 NeblQ0II04 452 aa9.34□□□□□ -0.91
Bdnf-210ENSMUST00000111051 Mdh1bQ5F204 500 aa9.34□□□□□ -0.91
Bdnf-210ENSMUST00000111051 Slc38a10Q5I012 1090 aa9.34□□□□□ -0.91
Bdnf-210ENSMUST00000111051 Miga2Q8BK03 593 aa9.34□□□□□ -0.91
Bdnf-210ENSMUST00000111051 Klhl20Q8VCK5 604 aa9.34□□□□□ -0.91
Bdnf-210ENSMUST00000111051 Anapc4Q91W96 807 aa9.34□□□□□ -0.91
Bdnf-210ENSMUST00000111051 Thap2Q9D305 217 aa9.34□□□□□ -0.91
Bdnf-210ENSMUST00000111051 EhhadhQ9DBM2 718 aa9.34□□□□□ -0.91
Bdnf-210ENSMUST00000111051 Zbtb7aO88939 569 aaKnown RBP9.33□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Nkx2-3P97334 362 aa9.33□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Tcerg1lQ3B807 590 aa9.33□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Usp13Q5BKP2 858 aa9.33□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Cdcp1Q5U462 833 aa9.33□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Ublcp1Q8BGR9 318 aa9.33□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Epc1Q8C9X6 813 aa9.33□□□□□ -0.92
Bdnf-210ENSMUST00000111051 AdpgkQ8VDL4 496 aa9.33□□□□□ -0.92
Bdnf-210ENSMUST00000111051 BaatQ91X34 420 aa9.33□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Lonrf3Q9D4H7 753 aa9.33□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Eef1gQ9D8N0 437 aaKnown RBP9.33□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Kif23E9Q5G3 953 aa9.33□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Nr1i2O54915 431 aa9.33□□□□□ -0.92
Bdnf-210ENSMUST00000111051 LdhaP06151 332 aaKnown RBP9.33□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Cyp4x1Q6A152 507 aa9.33□□□□□ -0.92
Bdnf-210ENSMUST00000111051 RragaQ80X95 313 aa9.33□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Asnsd1Q8BFS9 627 aa9.33□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Kcnq3Q8K3F6 873 aa9.33□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Ccdc89Q9DA73 370 aa9.33□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Cbx8Q9QXV1 362 aa9.33□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Gpaa1Q9WTK3 621 aa9.33□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Med1Q925J9 1575 aa9.33□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Ces1aE9PYP1 563 aa9.33□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Rsph10bE9PYQ0 876 aa9.33□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Apol10bG3X9K7 334 aa9.33□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Cyp2d34L7N463 504 aa9.33□□□□□ -0.92
Bdnf-210ENSMUST00000111051 CltaO08585 235 aa9.33□□□□□ -0.92
Bdnf-210ENSMUST00000111051 GabrdP22933 449 aa9.33□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Traf1P39428 409 aa9.33□□□□□ -0.92
Bdnf-210ENSMUST00000111051 1700013D24RikQ0P521 120 aa9.33□□□□□ -0.92
Bdnf-210ENSMUST00000111051 LbrQ3U9G9 626 aaKnown RBP9.33□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Cep85Q8BMK0 761 aa9.33□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Fam53cQ8BXQ8 393 aa9.33□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Gramd4Q8CB44 633 aa9.33□□□□□ -0.92
Bdnf-210ENSMUST00000111051 LgsnQ8CIX8 563 aa9.33□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Zbtb1Q91VL9 713 aa9.33□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Dydc2Q9D3X8 139 aa9.33□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Efcc1Q9JJF6 558 aa9.33□□□□□ -0.92
Bdnf-210ENSMUST00000111051 IkQ9Z1M8 557 aaKnown RBP9.33□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Sall1Q9ER74 1322 aa9.33□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Kifap3P70188 793 aa9.33□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Acot10Q32MW3 439 aa9.33□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Ric8aQ3TIR3 530 aa9.33□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Tmed8Q3UHI4 326 aa9.33□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Krt15Q61414 452 aa9.33□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Cplx4Q80WM3 160 aa9.33□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Spata2Q8K004 515 aa9.33□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Mrpl12Q9DB15 201 aaKnown RBP9.33□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Pex3Q9QXY9 372 aa9.33□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Gm30191A0A0U1RNT7 187 aa9.32□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Gm28042B7ZCM9 1014 aa9.32□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Ppfia4B8QI36 1187 aa9.32□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Zfp213E9QAW0 468 aa9.32□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Cyp19a1P28649 503 aa9.32□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Acbd5Q5XG73 508 aa9.32□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Ccpg1Q640L3 753 aa9.32□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Ctnna3Q65CL1 895 aa9.32□□□□□ -0.92
Retrieved 100 of 22,080 RNA–protein pairs in 16.8 ms