RNA–Protein interactions for RNA: ENSMUST00000040783.10

Usp40-201, Transcript of Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Usp40, Length 5,049 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40-201ENSMUST00000040783 Tmod1P49813 359 aa8.3□□□□□ -1.08
Usp40-201ENSMUST00000040783 Ccdc114Q3UX62 658 aa8.3□□□□□ -1.08
Usp40-201ENSMUST00000040783 Ctdp1Q7TSG2 960 aa8.3□□□□□ -1.08
Usp40-201ENSMUST00000040783 Pdzph1Q8BGR1 1238 aa8.3□□□□□ -1.08
Usp40-201ENSMUST00000040783 Maip1Q8BHE8 291 aa8.3□□□□□ -1.08
Usp40-201ENSMUST00000040783 Iffo1Q8BXL9 562 aa8.3□□□□□ -1.08
Usp40-201ENSMUST00000040783 Vps37cQ8R105 352 aa8.3□□□□□ -1.08
Usp40-201ENSMUST00000040783 Defb15Q8R2I5 79 aa8.3□□□□□ -1.08
Usp40-201ENSMUST00000040783 Cep19Q9CQA8 163 aa8.3□□□□□ -1.08
Usp40-201ENSMUST00000040783 Mtmr7Q9Z2C9 660 aa8.3□□□□□ -1.08
Usp40-201ENSMUST00000040783 Msh6P54276 1358 aaKnown RBP8.3□□□□□ -1.08
Usp40-201ENSMUST00000040783 Znf652Q5DU09 608 aa8.29□□□□□ -1.08
Usp40-201ENSMUST00000040783 Krt87Q6IMF0 495 aa8.29□□□□□ -1.08
Usp40-201ENSMUST00000040783 Unc5clQ6R653 518 aa8.29□□□□□ -1.08
Usp40-201ENSMUST00000040783 Sdccag8Q80UF4 717 aa8.29□□□□□ -1.08
Usp40-201ENSMUST00000040783 CactinQ9CS00 772 aaKnown RBP8.29□□□□□ -1.08
Usp40-201ENSMUST00000040783 Ppil4Q9CXG3 492 aaKnown RBP8.29□□□□□ -1.08
Usp40-201ENSMUST00000040783 Gm11549A0A286YD83 63 aa8.29□□□□□ -1.08
Usp40-201ENSMUST00000040783 Sept7O55131 436 aa8.29□□□□□ -1.08
Usp40-201ENSMUST00000040783 Ms4a1P19437 291 aa8.29□□□□□ -1.08
Usp40-201ENSMUST00000040783 Rrp1P56183 494 aaKnown RBP8.29□□□□□ -1.08
Usp40-201ENSMUST00000040783 Ccdc162pQ0VG85 912 aa8.29□□□□□ -1.08
Usp40-201ENSMUST00000040783 Kmt5aQ2YDW7 349 aa8.29□□□□□ -1.08
Usp40-201ENSMUST00000040783 Cnksr2Q80YA9 1032 aa8.29□□□□□ -1.08
Usp40-201ENSMUST00000040783 GopcQ8BH60 463 aa8.29□□□□□ -1.08
Usp40-201ENSMUST00000040783 Vps18Q8R307 973 aa8.29□□□□□ -1.08
Usp40-201ENSMUST00000040783 Atp5c1Q91VR2 298 aaKnown RBP8.29□□□□□ -1.08
Usp40-201ENSMUST00000040783 Chd1lQ9CXF7 900 aa8.29□□□□□ -1.08
Usp40-201ENSMUST00000040783 Magea6O89010 325 aa8.29□□□□□ -1.08
Usp40-201ENSMUST00000040783 Inf2Q0GNC1 1273 aa8.29□□□□□ -1.08
Usp40-201ENSMUST00000040783 Slc27a1Q60714 646 aa8.29□□□□□ -1.08
Usp40-201ENSMUST00000040783 Magea3Q6T340 320 aa8.29□□□□□ -1.08
Usp40-201ENSMUST00000040783 KhnynQ80U38 671 aa8.29□□□□□ -1.08
Usp40-201ENSMUST00000040783 Rnf168Q80XJ2 565 aa8.29□□□□□ -1.08
Usp40-201ENSMUST00000040783 Ddx39aQ8VDW0 427 aaKnown RBP8.29□□□□□ -1.08
Usp40-201ENSMUST00000040783 Aldh1b1Q9CZS1 519 aa8.29□□□□□ -1.08
Usp40-201ENSMUST00000040783 Rilpl1Q9JJC6 406 aa8.29□□□□□ -1.08
Usp40-201ENSMUST00000040783 Ccdc78D3Z5T1 437 aa8.29□□□□□ -1.08
Usp40-201ENSMUST00000040783 Gm5935Q497S0 212 aa8.29□□□□□ -1.08
Usp40-201ENSMUST00000040783 Slc38a10Q5I012 1090 aa8.29□□□□□ -1.08
Usp40-201ENSMUST00000040783 Vil1Q62468 827 aa8.29□□□□□ -1.08
Usp40-201ENSMUST00000040783 Arhgap10Q6Y5D8 786 aa8.29□□□□□ -1.08
Usp40-201ENSMUST00000040783 Klhl20Q8VCK5 604 aa8.29□□□□□ -1.08
Usp40-201ENSMUST00000040783 P2rx7Q9Z1M0 595 aa8.29□□□□□ -1.08
Usp40-201ENSMUST00000040783 Kif23E9Q5G3 953 aa8.28□□□□□ -1.08
Usp40-201ENSMUST00000040783 Zfp597E9Q6S0 419 aa8.28□□□□□ -1.08
Usp40-201ENSMUST00000040783 Gm5624F6ZZG8 207 aa8.28□□□□□ -1.08
Usp40-201ENSMUST00000040783 Sclt1G5E861 688 aa8.28□□□□□ -1.08
Usp40-201ENSMUST00000040783 Lipo1J3QME6 396 aa8.28□□□□□ -1.08
Usp40-201ENSMUST00000040783 Trappc10Q3TLI0 1259 aa8.28□□□□□ -1.08
Usp40-201ENSMUST00000040783 SlmapQ3URD3 845 aa8.28□□□□□ -1.08
Usp40-201ENSMUST00000040783 Slc12a8Q8VI23 705 aa8.28□□□□□ -1.08
Usp40-201ENSMUST00000040783 Krt20Q9D312 431 aa8.28□□□□□ -1.08
Usp40-201ENSMUST00000040783 Add2Q9QYB8 725 aa8.28□□□□□ -1.08
Usp40-201ENSMUST00000040783 Gm15262A0A140LIQ5 728 aa8.28□□□□□ -1.08
Usp40-201ENSMUST00000040783 Kcng1A2BDX4 514 aa8.28□□□□□ -1.08
Usp40-201ENSMUST00000040783 Axin2O88566 840 aa8.28□□□□□ -1.08
Usp40-201ENSMUST00000040783 CebpzP53569 1052 aaKnown RBP8.28□□□□□ -1.08
Usp40-201ENSMUST00000040783 LrmpQ60664 539 aa8.28□□□□□ -1.08
Usp40-201ENSMUST00000040783 Trpc6Q61143 930 aa8.28□□□□□ -1.08
Usp40-201ENSMUST00000040783 Cnnm4Q69ZF7 771 aa8.28□□□□□ -1.08
Usp40-201ENSMUST00000040783 Crybg3Q80W49 1005 aa8.28□□□□□ -1.08
Usp40-201ENSMUST00000040783 Slx1bQ8BX32 270 aa8.28□□□□□ -1.08
Usp40-201ENSMUST00000040783 Kbtbd13Q8C828 458 aa8.28□□□□□ -1.08
Usp40-201ENSMUST00000040783 Ppfibp1Q8C8U0 969 aaKnown RBP8.28□□□□□ -1.08
Usp40-201ENSMUST00000040783 E4f1Q8CCE9 783 aa8.28□□□□□ -1.08
Usp40-201ENSMUST00000040783 Gpr108Q91WD0 569 aa8.28□□□□□ -1.08
Usp40-201ENSMUST00000040783 Taf7lQ9D3R9 471 aa8.28□□□□□ -1.08
Usp40-201ENSMUST00000040783 EhhadhQ9DBM2 718 aa8.28□□□□□ -1.08
Usp40-201ENSMUST00000040783 Gbp2Q9Z0E6 589 aa8.28□□□□□ -1.08
Usp40-201ENSMUST00000040783 Frmpd4A2AFR3 1320 aa8.28□□□□□ -1.08
Usp40-201ENSMUST00000040783 Gm13023A2A8N2 498 aa8.28□□□□□ -1.08
Usp40-201ENSMUST00000040783 Cfap52Q5F201 620 aa8.28□□□□□ -1.08
Usp40-201ENSMUST00000040783 Dync1li2Q6PDL0 492 aaKnown RBP8.28□□□□□ -1.08
Usp40-201ENSMUST00000040783 Rassf10Q8BL43 508 aa8.28□□□□□ -1.08
Usp40-201ENSMUST00000040783 Gm10110D3Z5M2 615 aa8.28□□□□□ -1.08
Usp40-201ENSMUST00000040783 Ap1b1O35643 943 aaKnown RBP8.28□□□□□ -1.08
Usp40-201ENSMUST00000040783 Tph1P17532 447 aa8.28□□□□□ -1.08
Usp40-201ENSMUST00000040783 EgfrQ01279 1210 aa8.28□□□□□ -1.08
Usp40-201ENSMUST00000040783 Glra4Q61603 456 aa8.28□□□□□ -1.08
Usp40-201ENSMUST00000040783 Nme8Q715T0 586 aa8.28□□□□□ -1.08
Usp40-201ENSMUST00000040783 Zfp397Q7TNK4 527 aa8.28□□□□□ -1.08
Usp40-201ENSMUST00000040783 Cfap100Q80VN0 613 aa8.28□□□□□ -1.08
Usp40-201ENSMUST00000040783 Cdca7lQ922M5 438 aa8.28□□□□□ -1.08
Usp40-201ENSMUST00000040783 H2-OaQ9QWV1 250 aa8.28□□□□□ -1.08
Usp40-201ENSMUST00000040783 Gm11985A0A1B0GS61 206 aa8.27□□□□□ -1.08
Usp40-201ENSMUST00000040783 Ugt1a5B2RT14 529 aa8.27□□□□□ -1.08
Usp40-201ENSMUST00000040783 Pcdha4O88689 947 aa8.27□□□□□ -1.08
Usp40-201ENSMUST00000040783 YwhaeP62259 255 aaKnown RBP8.27□□□□□ -1.08
Usp40-201ENSMUST00000040783 Tbc1d31Q6NXY1 996 aa8.27□□□□□ -1.08
Usp40-201ENSMUST00000040783 Popdc2Q9ES82 367 aa8.27□□□□□ -1.08
Usp40-201ENSMUST00000040783 Usp42B2RQC2 1324 aaKnown RBP8.27□□□□□ -1.09
Usp40-201ENSMUST00000040783 Gm2030D3Z7C4 212 aa8.27□□□□□ -1.09
Usp40-201ENSMUST00000040783 Speer4f2E9Q366 295 aa8.27□□□□□ -1.09
Usp40-201ENSMUST00000040783 Cct6aP80317 531 aaKnown RBP8.27□□□□□ -1.09
Usp40-201ENSMUST00000040783 Nxf2Q4ZGD8 691 aa8.27□□□□□ -1.09
Usp40-201ENSMUST00000040783 Kctd1Q5M956 257 aa8.27□□□□□ -1.09
Usp40-201ENSMUST00000040783 Arhgef2Q60875 985 aa8.27□□□□□ -1.09
Usp40-201ENSMUST00000040783 Pde1cQ64338 706 aa8.27□□□□□ -1.09
Usp40-201ENSMUST00000040783 Bbs9Q811G0 885 aa8.27□□□□□ -1.09
Retrieved 100 of 22,080 RNA–protein pairs in 21.4 ms