RNA–Protein interactions for RNA: YOR319W

HSH49, Transcript of U2-snRNP associated splicing factor, yeast

Gene HSH49, Length 642 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HSH49	YOR319W	IME4	P41833	600 aa		4.1	□□□□□ -1.75
HSH49	YOR319W	DSD1	P53095	428 aa		4.1	□□□□□ -1.75
HSH49	YOR319W	YNR061C	P53747	219 aa		4.1	□□□□□ -1.75
HSH49	YOR319W	YNL092W	P53934	400 aa		4.1	□□□□□ -1.75
HSH49	YOR319W	YPL071C	Q02864	156 aa		4.1	□□□□□ -1.75
HSH49	YOR319W	NGL3	Q03210	505 aa		4.1	□□□□□ -1.75
HSH49	YOR319W	SKG3	Q06315	1026 aa		4.1	□□□□□ -1.75
HSH49	YOR319W	YDL242W	Q07746	117 aa		4.1	□□□□□ -1.75
HSH49	YOR319W	TCO89	Q08921	799 aa		4.1	□□□□□ -1.75
HSH49	YOR319W	LYS21	Q12122	440 aa	Known RBP	4.1	□□□□□ -1.75
HSH49	YOR319W	SNU66	Q12420	587 aa	Predicted RBP	4.1	□□□□□ -1.75
HSH49	YOR319W	YOR019W	Q99248	730 aa		4.1	□□□□□ -1.75
HSH49	YOR319W	YBR085C-A	O43137	85 aa		4.09	□□□□□ -1.75
HSH49	YOR319W	CBS1	P14066	229 aa		4.09	□□□□□ -1.75
HSH49	YOR319W	AMD2	P22580	549 aa		4.09	□□□□□ -1.75
HSH49	YOR319W	ROX1	P25042	368 aa		4.09	□□□□□ -1.75
HSH49	YOR319W	LCB1	P25045	558 aa	Known RBP	4.09	□□□□□ -1.75
HSH49	YOR319W	ERG3	P32353	365 aa		4.09	□□□□□ -1.75
HSH49	YOR319W	PXA2	P34230	853 aa		4.09	□□□□□ -1.75
HSH49	YOR319W	HES1	P35843	434 aa		4.09	□□□□□ -1.75
HSH49	YOR319W	ERC1	P38767	581 aa		4.09	□□□□□ -1.75
HSH49	YOR319W	SPO22	P40511	975 aa		4.09	□□□□□ -1.75
HSH49	YOR319W	UBX6	P47049	396 aa		4.09	□□□□□ -1.75
HSH49	YOR319W	COG2	P53271	262 aa		4.09	□□□□□ -1.75
HSH49	YOR319W	COQ6	P53318	479 aa		4.09	□□□□□ -1.75
HSH49	YOR319W	GFD1	Q04839	188 aa	Known RBP	4.09	□□□□□ -1.75
HSH49	YOR319W	PGA3	Q12746	312 aa	Known RBP	4.09	□□□□□ -1.75
HSH49	YOR319W	CET1	O13297	549 aa	Predicted RBP	4.08	□□□□□ -1.76
HSH49	YOR319W	WHI2	P12611	486 aa		4.08	□□□□□ -1.76
HSH49	YOR319W	RFA2	P26754	273 aa	Known RBP	4.08	□□□□□ -1.76
HSH49	YOR319W	PEP3	P27801	918 aa		4.08	□□□□□ -1.76
HSH49	YOR319W	VMA8	P32610	256 aa	Known RBP	4.08	□□□□□ -1.76
HSH49	YOR319W	PEX5	P35056	612 aa		4.08	□□□□□ -1.76
HSH49	YOR319W	PHM8	P40025	321 aa		4.08	□□□□□ -1.76
HSH49	YOR319W	JHD1	P40034	492 aa		4.08	□□□□□ -1.76
HSH49	YOR319W	AXL1	P40851	1208 aa		4.08	□□□□□ -1.76
HSH49	YOR319W	GPD2	P41911	440 aa	Known RBP	4.08	□□□□□ -1.76
HSH49	YOR319W	NPA3	P47122	385 aa		4.08	□□□□□ -1.76
HSH49	YOR319W	RSC1	P53236	928 aa		4.08	□□□□□ -1.76
HSH49	YOR319W	DCP2	P53550	970 aa	Known RBP	4.08	□□□□□ -1.76
HSH49	YOR319W	YAT1	P80235	687 aa		4.08	□□□□□ -1.76
HSH49	YOR319W	UBP16	Q02863	499 aa		4.08	□□□□□ -1.76
HSH49	YOR319W	INA17	Q02888	182 aa		4.08	□□□□□ -1.76
HSH49	YOR319W	YML119W	Q03208	357 aa		4.08	□□□□□ -1.76
HSH49	YOR319W	SXM1	Q04175	944 aa	Known RBP	4.08	□□□□□ -1.76
HSH49	YOR319W	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	4.08	□□□□□ -1.76	not detected
HSH49	YOR319W	YPL191C	Q08930	360 aa		4.08	□□□□□ -1.76
HSH49	YOR319W	LCB4	Q12246	624 aa		4.08	□□□□□ -1.76
HSH49	YOR319W	RTN2	Q12443	393 aa		4.08	□□□□□ -1.76
HSH49	YOR319W	ZPS1	Q12512	249 aa		4.08	□□□□□ -1.76
HSH49	YOR319W	PGK1	P00560	416 aa	Known RBP	4.07	□□□□□ -1.76
HSH49	YOR319W	CPA2	P03965	1118 aa	Known RBP	4.07	□□□□□ -1.76
HSH49	YOR319W	MET17	P06106	444 aa		4.07	□□□□□ -1.76
HSH49	YOR319W	NUP1	P20676	1076 aa		4.07	□□□□□ -1.76
HSH49	YOR319W	PWP1	P21304	576 aa	Known RBP	4.07	□□□□□ -1.76
HSH49	YOR319W	RNR3	P21672	869 aa	Known RBP	4.07	□□□□□ -1.76
HSH49	YOR319W	RPC53	P25441	422 aa		4.07	□□□□□ -1.76
HSH49	YOR319W	LAC1	P28496	418 aa		4.07	□□□□□ -1.76
HSH49	YOR319W	PDB1	P32473	366 aa	Known RBP	4.07	□□□□□ -1.76
HSH49	YOR319W	GDA1	P32621	518 aa		4.07	□□□□□ -1.76
HSH49	YOR319W	KES1	P35844	434 aa	Known RBP	4.07	□□□□□ -1.76
HSH49	YOR319W	BYE1	P36106	594 aa		4.07	□□□□□ -1.76
HSH49	YOR319W	AGP2	P38090	596 aa		4.07	□□□□□ -1.76
HSH49	YOR319W	MAL33	P38157	468 aa		4.07	□□□□□ -1.76
HSH49	YOR319W	MUM2	P38236	366 aa		4.07	□□□□□ -1.76
HSH49	YOR319W	YNG2	P38806	282 aa	Known RBP	4.07	□□□□□ -1.76
HSH49	YOR319W	MTG2	P38860	518 aa		4.07	□□□□□ -1.76
HSH49	YOR319W	LSM5	P40089	93 aa	Known RBP	4.07	□□□□□ -1.76
HSH49	YOR319W	SEC24	P40482	926 aa	Known RBP	4.07	□□□□□ -1.76
HSH49	YOR319W	MSY1	P48527	492 aa		4.07	□□□□□ -1.76
HSH49	YOR319W	YGR066C	P53242	292 aa		4.07	□□□□□ -1.76
HSH49	YOR319W	CPR8	P53728	308 aa		4.07	□□□□□ -1.76
HSH49	YOR319W	CRN1	Q06440	651 aa		4.07	□□□□□ -1.76
HSH49	YOR319W	GRC3	Q07845	632 aa		4.07	□□□□□ -1.76
HSH49	YOR319W	GPN2	Q08726	347 aa	Predicted RBP	4.07	□□□□□ -1.76
HSH49	YOR319W	COX1	P00401	534 aa		4.06	□□□□□ -1.76
HSH49	YOR319W	HOM3	P10869	527 aa		4.06	□□□□□ -1.76
HSH49	YOR319W	PTP1	P25044	335 aa		4.06	□□□□□ -1.76
HSH49	YOR319W	AUR1	P36107	401 aa	Predicted RBP	4.06	□□□□□ -1.76
HSH49	YOR319W	NTR2	P36118	322 aa	Predicted RBP	4.06	□□□□□ -1.76
HSH49	YOR319W	AAP1	P37898	856 aa	Known RBP	4.06	□□□□□ -1.76
HSH49	YOR319W	SRO77	P38163	1010 aa		4.06	□□□□□ -1.76
HSH49	YOR319W	UBP13	P38187	747 aa		4.06	□□□□□ -1.76
HSH49	YOR319W	REG2	P38232	338 aa		4.06	□□□□□ -1.76
HSH49	YOR319W	SRP72	P38688	640 aa	Known RBP	4.06	□□□□□ -1.76
HSH49	YOR319W	RGI2	P40188	164 aa		4.06	□□□□□ -1.76
HSH49	YOR319W	TAX4	P47030	604 aa		4.06	□□□□□ -1.76
HSH49	YOR319W	STR3	P53101	465 aa	Known RBP	4.06	□□□□□ -1.76
HSH49	YOR319W	YGL117W	P53133	265 aa		4.06	□□□□□ -1.76
HSH49	YOR319W	AAT1	Q01802	451 aa		4.06	□□□□□ -1.76
HSH49	YOR319W	YML037C	Q03703	340 aa		4.06	□□□□□ -1.76
HSH49	YOR319W	ARG7	Q04728	441 aa		4.06	□□□□□ -1.76
HSH49	YOR319W	YLR352W	Q06479	807 aa		4.06	□□□□□ -1.76
HSH49	YOR319W	SWA2	Q06677	668 aa		4.06	□□□□□ -1.76
HSH49	YOR319W	PSR1	Q07800	427 aa		4.06	□□□□□ -1.76
HSH49	YOR319W	GET3	Q12154	354 aa	Known RBP	4.06	□□□□□ -1.76
HSH49	YOR319W	YJR112W-A	Q3E743	109 aa		4.06	□□□□□ -1.76
HSH49	YOR319W	AI5_ALPHA	Q9ZZX1	630 aa		4.06	□□□□□ -1.76
HSH49	YOR319W	HSP82	P02829	709 aa	Known RBP	4.05	□□□□□ -1.76
HSH49	YOR319W	DFR1	P07807	211 aa	Known RBP RIP-Chip data	4.05	□□□□□ -1.76	not detected

Retrieved 100 of 5,963 RNA–protein pairs in 17.2 ms