RNA–Protein interactions for RNA: YOR261C

RPN8, Transcript of Essential non-ATPase regulatory subunit of the 26S proteasome, yeast

Gene RPN8, Length 1,017 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPN8	YOR261C	FUI1	P38196	639 aa		4.67	□□□□□ -1.66
RPN8	YOR261C	IST3	P40565	148 aa	Predicted RBP	4.67	□□□□□ -1.66
RPN8	YOR261C	IRC8	P47046	822 aa		4.67	□□□□□ -1.66
RPN8	YOR261C	YPT11	P48559	417 aa		4.67	□□□□□ -1.66
RPN8	YOR261C	PET111	P08468	800 aa		4.66	□□□□□ -1.66
RPN8	YOR261C	RAD16	P31244	790 aa		4.66	□□□□□ -1.66
RPN8	YOR261C	PXL1	P36166	706 aa		4.66	□□□□□ -1.66
RPN8	YOR261C	GND1	P38720	489 aa	Known RBP	4.66	□□□□□ -1.66
RPN8	YOR261C	SEC31	P38968	1273 aa	Known RBP	4.66	□□□□□ -1.66
RPN8	YOR261C	MDV1	P47025	714 aa		4.66	□□□□□ -1.66
RPN8	YOR261C	LYS20	P48570	428 aa	Known RBP	4.66	□□□□□ -1.66
RPN8	YOR261C	UBP8	P50102	471 aa		4.66	□□□□□ -1.66
RPN8	YOR261C	YNR061C	P53747	219 aa		4.66	□□□□□ -1.66
RPN8	YOR261C	YNL144C	P53907	740 aa		4.66	□□□□□ -1.66
RPN8	YOR261C	GTR1	Q00582	310 aa		4.66	□□□□□ -1.66
RPN8	YOR261C	SWF1	Q04629	336 aa		4.66	□□□□□ -1.66
RPN8	YOR261C	VCX1	Q99385	411 aa		4.66	□□□□□ -1.66
RPN8	YOR261C	SSM4	P40318	1319 aa		4.66	□□□□□ -1.66
RPN8	YOR261C	PFK2	P16862	959 aa	Known RBP RIP-Chip data	4.65	□□□□□ -1.67	not detected
RPN8	YOR261C	ERG8	P24521	451 aa		4.65	□□□□□ -1.67
RPN8	YOR261C	TFC3	P34111	1160 aa		4.65	□□□□□ -1.67
RPN8	YOR261C	PSD1	P39006	500 aa		4.65	□□□□□ -1.67
RPN8	YOR261C	RPN11	P43588	306 aa	Known RBP	4.65	□□□□□ -1.67
RPN8	YOR261C	YGL036W	P53185	909 aa	Predicted RBP	4.65	□□□□□ -1.67
RPN8	YOR261C	CAC2	Q04199	468 aa		4.65	□□□□□ -1.67
RPN8	YOR261C	VID22	Q05934	901 aa		4.65	□□□□□ -1.67
RPN8	YOR261C	ERG27	Q12452	347 aa	Known RBP	4.65	□□□□□ -1.67
RPN8	YOR261C	STE50	P25344	346 aa		4.64	□□□□□ -1.67
RPN8	YOR261C	TEF4	P36008	412 aa	Known RBP	4.64	□□□□□ -1.67
RPN8	YOR261C	LHS1	P36016	881 aa		4.64	□□□□□ -1.67
RPN8	YOR261C	SCO2	P38072	301 aa		4.64	□□□□□ -1.67
RPN8	YOR261C	MRX1	P40050	688 aa		4.64	□□□□□ -1.67
RPN8	YOR261C	ASI1	P54074	624 aa		4.64	□□□□□ -1.67
RPN8	YOR261C	REG1	Q00816	1014 aa		4.64	□□□□□ -1.67
RPN8	YOR261C	RSM28	Q03430	361 aa		4.64	□□□□□ -1.67
RPN8	YOR261C	GSH2	Q08220	491 aa		4.64	□□□□□ -1.67
RPN8	YOR261C	YLR049C	Q12110	428 aa		4.64	□□□□□ -1.67
RPN8	YOR261C	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	4.64	□□□□□ -1.67	not detected
RPN8	YOR261C	UBX3	Q12229	455 aa		4.64	□□□□□ -1.67
RPN8	YOR261C	SOF1	P33750	489 aa	Known RBP	4.63	□□□□□ -1.67
RPN8	YOR261C	UME6	P39001	836 aa		4.63	□□□□□ -1.67
RPN8	YOR261C	YIR016W	P40572	265 aa		4.63	□□□□□ -1.67
RPN8	YOR261C	CTK2	P46962	323 aa		4.63	□□□□□ -1.67
RPN8	YOR261C	VPS4	P52917	437 aa		4.63	□□□□□ -1.67
RPN8	YOR261C	POS5	Q06892	414 aa		4.63	□□□□□ -1.67
RPN8	YOR261C	YLR112W	Q12130	139 aa		4.63	□□□□□ -1.67
RPN8	YOR261C	TKL1	P23254	680 aa	Known RBP	4.62	□□□□□ -1.67
RPN8	YOR261C	LEU5	P38702	357 aa		4.62	□□□□□ -1.67
RPN8	YOR261C	ECM10	P39987	644 aa		4.62	□□□□□ -1.67
RPN8	YOR261C	PFK26	P40433	827 aa	Known RBP	4.62	□□□□□ -1.67
RPN8	YOR261C	YIL152W	P40455	235 aa		4.62	□□□□□ -1.67
RPN8	YOR261C	PSK2	Q08217	1101 aa		4.62	□□□□□ -1.67
RPN8	YOR261C	TRX2	P22803	104 aa	Known RBP	4.61	□□□□□ -1.67
RPN8	YOR261C	ATO2	P32907	282 aa		4.61	□□□□□ -1.67
RPN8	YOR261C	AXL2	P38928	823 aa		4.61	□□□□□ -1.67
RPN8	YOR261C	RIC1	P40395	1056 aa		4.61	□□□□□ -1.67
RPN8	YOR261C	VPS25	P47142	202 aa		4.61	□□□□□ -1.67
RPN8	YOR261C	BOP3	P53958	396 aa		4.61	□□□□□ -1.67
RPN8	YOR261C	PFA5	Q03289	374 aa		4.61	□□□□□ -1.67
RPN8	YOR261C	SRL1	Q08673	210 aa		4.61	□□□□□ -1.67
RPN8	YOR261C	GPN2	Q08726	347 aa	Predicted RBP	4.61	□□□□□ -1.67
RPN8	YOR261C	YOL087C	Q99247	1116 aa		4.61	□□□□□ -1.67
RPN8	YOR261C	YOR019W	Q99248	730 aa		4.61	□□□□□ -1.67
RPN8	YOR261C	YLR302C	O13544	120 aa		4.6	□□□□□ -1.67
RPN8	YOR261C	RPB2	P08518	1224 aa	Known RBP	4.6	□□□□□ -1.67
RPN8	YOR261C	RPL42A	P0CX27	106 aa	Known RBP	4.6	□□□□□ -1.67
RPN8	YOR261C	RPL42B	P0CX28	106 aa	Known RBP	4.6	□□□□□ -1.67
RPN8	YOR261C	YFL068W	P0CX99	160 aa		4.6	□□□□□ -1.67
RPN8	YOR261C	YLL066W-A	P0CY00	160 aa		4.6	□□□□□ -1.67
RPN8	YOR261C	YLL067W-A	P0CY01	160 aa		4.6	□□□□□ -1.67
RPN8	YOR261C	GUK1	P15454	187 aa	Known RBP	4.6	□□□□□ -1.67
RPN8	YOR261C	CNS1	P33313	385 aa		4.6	□□□□□ -1.67
RPN8	YOR261C	SLC1	P33333	303 aa		4.6	□□□□□ -1.67
RPN8	YOR261C	YER010C	P40011	234 aa		4.6	□□□□□ -1.67
RPN8	YOR261C	YML131W	Q03102	365 aa		4.6	□□□□□ -1.67
RPN8	YOR261C	ECM16	Q04217	1267 aa	Known RBP	4.6	□□□□□ -1.67
RPN8	YOR261C	SNA4	Q07549	140 aa		4.6	□□□□□ -1.67
RPN8	YOR261C	NUS1	Q12063	375 aa		4.6	□□□□□ -1.67
RPN8	YOR261C	SAC1	P32368	623 aa	Known RBP	4.59	□□□□□ -1.67
RPN8	YOR261C	RRN3	P36070	627 aa		4.59	□□□□□ -1.67
RPN8	YOR261C	IML2	P47031	731 aa		4.59	□□□□□ -1.67
RPN8	YOR261C	FCP1	Q03254	732 aa		4.59	□□□□□ -1.67
RPN8	YOR261C	RCO1	Q04779	684 aa		4.59	□□□□□ -1.67
RPN8	YOR261C	SNO4	Q04902	237 aa		4.59	□□□□□ -1.67
RPN8	YOR261C	MLH2	Q07980	695 aa		4.59	□□□□□ -1.67
RPN8	YOR261C	HSP33	Q08914	237 aa	Known RBP	4.59	□□□□□ -1.67
RPN8	YOR261C	HSP32	Q08992	237 aa		4.59	□□□□□ -1.67
RPN8	YOR261C	CDC15	P27636	974 aa		4.58	□□□□□ -1.68
RPN8	YOR261C	MRP20	P32387	263 aa		4.58	□□□□□ -1.68
RPN8	YOR261C	CBF2	P32504	956 aa		4.58	□□□□□ -1.68
RPN8	YOR261C	PCL6	P40038	420 aa		4.58	□□□□□ -1.68
RPN8	YOR261C	KAP123	P40069	1113 aa	Known RBP	4.58	□□□□□ -1.68
RPN8	YOR261C	IME4	P41833	600 aa		4.58	□□□□□ -1.68
RPN8	YOR261C	YFR020W	P43600	232 aa		4.58	□□□□□ -1.68
RPN8	YOR261C	PIL1	P53252	339 aa	Known RBP	4.58	□□□□□ -1.68
RPN8	YOR261C	ARP9	Q05123	467 aa		4.58	□□□□□ -1.68
RPN8	YOR261C	CLB2	P24869	491 aa		4.57	□□□□□ -1.68
RPN8	YOR261C	YCR043C	P25361	127 aa		4.57	□□□□□ -1.68
RPN8	YOR261C	FMP10	P40098	244 aa		4.57	□□□□□ -1.68
RPN8	YOR261C	LSC1	P53598	329 aa	Known RBP	4.57	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 25.6 ms