RNA–Protein interactions for RNA: YNL330C

RPD3, Transcript of Histone deacetylase, component of both the Rpd3S and Rpd3L complexes, yeastyeast

Gene RPD3, Length 1,302 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPD3YNL330C ESA1Q08649 445 aa8.64□□□□□ -1.03
RPD3YNL330C MSH5Q12175 901 aa8.64□□□□□ -1.03
RPD3YNL330C MDY2Q12285 212 aa8.64□□□□□ -1.03
RPD3YNL330C YBL029C-AQ3E756 94 aa8.64□□□□□ -1.03
RPD3YNL330C TPK2P06245 380 aa8.63□□□□□ -1.03
RPD3YNL330C MSS18P08593 268 aa8.63□□□□□ -1.03
RPD3YNL330C SBP1P10080 294 aaKnown RBP8.63□□□□□ -1.03
RPD3YNL330C RPB4P20433 221 aaPredicted RBP8.63□□□□□ -1.03
RPD3YNL330C CLB3P24870 427 aa8.63□□□□□ -1.03
RPD3YNL330C RAD16P31244 790 aa8.63□□□□□ -1.03
RPD3YNL330C PAH1P32567 862 aa8.63□□□□□ -1.03
RPD3YNL330C DUR3P33413 735 aa8.63□□□□□ -1.03
RPD3YNL330C TIF3P34167 436 aaKnown RBP8.63□□□□□ -1.03
RPD3YNL330C PTC1P35182 281 aa8.63□□□□□ -1.03
RPD3YNL330C MRP8P35719 219 aa8.63□□□□□ -1.03
RPD3YNL330C DRE2P36152 348 aa8.63□□□□□ -1.03
RPD3YNL330C APE3P37302 537 aaKnown RBP8.63□□□□□ -1.03
RPD3YNL330C GRS1P38088 690 aaKnown RBP8.63□□□□□ -1.03
RPD3YNL330C RIM11P38615 370 aa8.63□□□□□ -1.03
RPD3YNL330C YHL026CP38740 315 aa8.63□□□□□ -1.03
RPD3YNL330C RIM4P38741 713 aa8.63□□□□□ -1.03
RPD3YNL330C CYC2P38909 366 aa8.63□□□□□ -1.03
RPD3YNL330C EDC3P39998 551 aaKnown RBP8.63□□□□□ -1.03
RPD3YNL330C ALD5P40047 520 aaKnown RBP8.63□□□□□ -1.03
RPD3YNL330C GCV2P49095 1034 aa8.63□□□□□ -1.03
RPD3YNL330C IMA1P53051 589 aa8.63□□□□□ -1.03
RPD3YNL330C GPI1P53306 609 aa8.63□□□□□ -1.03
RPD3YNL330C SPC98P53540 846 aa8.63□□□□□ -1.03
RPD3YNL330C CDC14Q00684 551 aa8.63□□□□□ -1.03
RPD3YNL330C RCR2Q03446 210 aaKnown RBP8.63□□□□□ -1.03
RPD3YNL330C PSY3Q12318 242 aa8.63□□□□□ -1.03
RPD3YNL330C IES3Q12345 250 aa8.63□□□□□ -1.03
RPD3YNL330C MIS1P09440 975 aaKnown RBP8.62□□□□□ -1.03
RPD3YNL330C SSA1P10591 642 aaKnown RBP8.62□□□□□ -1.03
RPD3YNL330C NGG1P32494 702 aa8.62□□□□□ -1.03
RPD3YNL330C CSE1P33307 960 aa8.62□□□□□ -1.03
RPD3YNL330C PTH2P34222 208 aa8.62□□□□□ -1.03
RPD3YNL330C AMN1P38285 549 aaPredicted RBP8.62□□□□□ -1.03
RPD3YNL330C STS1P38637 319 aa8.62□□□□□ -1.03
RPD3YNL330C XDJ1P39102 459 aa8.62□□□□□ -1.03
RPD3YNL330C SEO1P39709 593 aa8.62□□□□□ -1.03
RPD3YNL330C HAT2P39984 401 aa8.62□□□□□ -1.03
RPD3YNL330C ELO3P40319 345 aa8.62□□□□□ -1.03
RPD3YNL330C CNN1P43618 361 aa8.62□□□□□ -1.03
RPD3YNL330C EMC2P47133 292 aaKnown RBP8.62□□□□□ -1.03
RPD3YNL330C PEX8P53248 589 aa8.62□□□□□ -1.03
RPD3YNL330C COP1P53622 1201 aaKnown RBP8.62□□□□□ -1.03
RPD3YNL330C NHP10Q03435 203 aa8.62□□□□□ -1.03
RPD3YNL330C ECM38Q05902 660 aaPredicted RBP8.62□□□□□ -1.03
RPD3YNL330C PMT7Q06644 662 aa8.62□□□□□ -1.03
RPD3YNL330C DBP10Q12389 995 aaKnown RBP8.62□□□□□ -1.03
RPD3YNL330C SEM1O94742 89 aa8.61□□□□□ -1.03
RPD3YNL330C COX5AP00424 153 aa8.61□□□□□ -1.03
RPD3YNL330C HEM2P05373 342 aa8.61□□□□□ -1.03
RPD3YNL330C BCY1P07278 416 aaKnown RBP8.61□□□□□ -1.03
RPD3YNL330C SNF4P12904 322 aa8.61□□□□□ -1.03
RPD3YNL330C ART10P18634 518 aaKnown RBP8.61□□□□□ -1.03
RPD3YNL330C DBR1P24309 405 aaKnown RBP8.61□□□□□ -1.03
RPD3YNL330C YSP3P25036 478 aa8.61□□□□□ -1.03
RPD3YNL330C ERG6P25087 383 aaKnown RBP8.61□□□□□ -1.03
RPD3YNL330C RVS161P25343 265 aaKnown RBP8.61□□□□□ -1.03
RPD3YNL330C PHO91P27514 894 aa8.61□□□□□ -1.03
RPD3YNL330C UGP1P32861 499 aaKnown RBP8.61□□□□□ -1.03
RPD3YNL330C CSE2P33308 149 aa8.61□□□□□ -1.03
RPD3YNL330C TOM20P35180 183 aa8.61□□□□□ -1.03
RPD3YNL330C MDJ1P35191 511 aa8.61□□□□□ -1.03
RPD3YNL330C IST2P38250 946 aa8.61□□□□□ -1.03
RPD3YNL330C FAA2P39518 744 aa8.61□□□□□ -1.03
RPD3YNL330C YEN1P40028 759 aa8.61□□□□□ -1.03
RPD3YNL330C DAN4P47179 1161 aa8.61□□□□□ -1.03
RPD3YNL330C SHE4P51534 789 aa8.61□□□□□ -1.03
RPD3YNL330C GTR2P53290 341 aa8.61□□□□□ -1.03
RPD3YNL330C GND2P53319 492 aa8.61□□□□□ -1.03
RPD3YNL330C RSC4Q02206 625 aa8.61□□□□□ -1.03
RPD3YNL330C RMI1Q02685 241 aa8.61□□□□□ -1.03
RPD3YNL330C RAD30Q04049 632 aa8.61□□□□□ -1.03
RPD3YNL330C HEL2Q05580 639 aaKnown RBP8.61□□□□□ -1.03
RPD3YNL330C SGT1Q08446 395 aa8.61□□□□□ -1.03
RPD3YNL330C ULA1Q12059 462 aa8.61□□□□□ -1.03
RPD3YNL330C YOR342CQ12182 319 aa8.61□□□□□ -1.03
RPD3YNL330C WSC3Q12215 556 aa8.61□□□□□ -1.03
RPD3YNL330C PUF2Q12221 1075 aaKnown RBP RIP-Chip data8.61□□□□□ -1.03not detected
RPD3YNL330C AFI1Q99222 893 aa8.61□□□□□ -1.03
RPD3YNL330C SAS5Q99314 248 aa8.61□□□□□ -1.03
RPD3YNL330C GLN4P13188 809 aaKnown RBP8.6□□□□□ -1.03
RPD3YNL330C SPB1P25582 841 aaPredicted RBP8.6□□□□□ -1.03
RPD3YNL330C RPS5P26783 225 aaKnown RBP8.6□□□□□ -1.03
RPD3YNL330C BEM1P29366 551 aa8.6□□□□□ -1.03
RPD3YNL330C MET4P32389 672 aa8.6□□□□□ -1.03
RPD3YNL330C BIO2P32451 375 aa8.6□□□□□ -1.03
RPD3YNL330C SEC66P33754 206 aa8.6□□□□□ -1.03
RPD3YNL330C WHI3P34761 661 aaKnown RBP8.6□□□□□ -1.03
RPD3YNL330C DEF1P35732 738 aaKnown RBP8.6□□□□□ -1.03
RPD3YNL330C VRP1P37370 817 aa8.6□□□□□ -1.03
RPD3YNL330C MAK5P38112 773 aaPredicted RBP8.6□□□□□ -1.03
RPD3YNL330C YBL029WP38201 376 aa8.6□□□□□ -1.03
RPD3YNL330C TDP1P38319 544 aa8.6□□□□□ -1.03
RPD3YNL330C AIM20P40451 204 aa8.6□□□□□ -1.03
RPD3YNL330C COA1P40452 197 aa8.6□□□□□ -1.03
RPD3YNL330C IMA5P40884 581 aa8.6□□□□□ -1.03
Retrieved 100 of 5,963 RNA–protein pairs in 10.9 ms