RNA–Protein interactions for RNA: YNL016W

PUB1, Transcript of Poly (A)+ RNA-binding protein, yeast

Gene PUB1, Length 1,362 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PUB1	YNL016W	SNF12	P53628	566 aa		4.09	□□□□□ -1.75
PUB1	YNL016W	PRO2	P54885	456 aa	Known RBP	4.09	□□□□□ -1.75
PUB1	YNL016W	ADA2	Q02336	434 aa		4.09	□□□□□ -1.75
PUB1	YNL016W	GIS4	Q04233	774 aa		4.09	□□□□□ -1.75
PUB1	YNL016W	GYL1	Q04322	720 aa		4.09	□□□□□ -1.75
PUB1	YNL016W	GAD1	Q04792	585 aa		4.09	□□□□□ -1.75
PUB1	YNL016W	ELG1	Q12050	791 aa		4.09	□□□□□ -1.75
PUB1	YNL016W	COX17	Q12287	69 aa		4.09	□□□□□ -1.75
PUB1	YNL016W	YLR122C	Q12312	125 aa		4.09	□□□□□ -1.75
PUB1	YNL016W	PCK1	P10963	549 aa		4.08	□□□□□ -1.76
PUB1	YNL016W	CBS1	P14066	229 aa		4.08	□□□□□ -1.76
PUB1	YNL016W	CMP2	P14747	604 aa		4.08	□□□□□ -1.76
PUB1	YNL016W	KAR3	P17119	729 aa		4.08	□□□□□ -1.76
PUB1	YNL016W	YCK1	P23291	538 aa		4.08	□□□□□ -1.76
PUB1	YNL016W	URA7	P28274	579 aa	Known RBP	4.08	□□□□□ -1.76
PUB1	YNL016W	NIP1	P32497	812 aa	Known RBP	4.08	□□□□□ -1.76
PUB1	YNL016W	TYE7	P33122	291 aa	Predicted RBP	4.08	□□□□□ -1.76
PUB1	YNL016W	NNK1	P36003	928 aa		4.08	□□□□□ -1.76
PUB1	YNL016W	ECM21	P38167	1117 aa	Known RBP	4.08	□□□□□ -1.76
PUB1	YNL016W	PSD1	P39006	500 aa		4.08	□□□□□ -1.76
PUB1	YNL016W	GID8	P40208	455 aa		4.08	□□□□□ -1.76
PUB1	YNL016W	CAB2	P40506	365 aa		4.08	□□□□□ -1.76
PUB1	YNL016W	MET28	P40573	187 aa		4.08	□□□□□ -1.76
PUB1	YNL016W	CEP3	P40969	608 aa		4.08	□□□□□ -1.76
PUB1	YNL016W	FET5	P43561	622 aa		4.08	□□□□□ -1.76
PUB1	YNL016W	EXG2	P52911	562 aa		4.08	□□□□□ -1.76
PUB1	YNL016W	ARI1	P53111	347 aa	Known RBP	4.08	□□□□□ -1.76
PUB1	YNL016W	YNR068C	P53754	272 aa		4.08	□□□□□ -1.76
PUB1	YNL016W	ACS1	Q01574	713 aa		4.08	□□□□□ -1.76
PUB1	YNL016W	GTB1	Q04924	702 aa		4.08	□□□□□ -1.76
PUB1	YNL016W	VAM6	Q07468	1049 aa		4.08	□□□□□ -1.76
PUB1	YNL016W	YDL144C	Q07589	356 aa		4.08	□□□□□ -1.76
PUB1	YNL016W	ENT4	Q07872	247 aa		4.08	□□□□□ -1.76
PUB1	YNL016W	YDR524C-B	Q3E6R4	66 aa		4.08	□□□□□ -1.76
PUB1	YNL016W	UBR2	Q07963	1872 aa		4.07	□□□□□ -1.76
PUB1	YNL016W	YLR302C	O13544	120 aa		4.07	□□□□□ -1.76
PUB1	YNL016W	TY2A-LR1	P0C2J4	438 aa		4.07	□□□□□ -1.76
PUB1	YNL016W	TY2A-F	P0CX61	438 aa		4.07	□□□□□ -1.76
PUB1	YNL016W	TY2A-GR2	P0CX62	438 aa		4.07	□□□□□ -1.76
PUB1	YNL016W	OM45	P16547	393 aa		4.07	□□□□□ -1.76
PUB1	YNL016W	ERS1	P17261	260 aa		4.07	□□□□□ -1.76
PUB1	YNL016W	PET123	P17558	318 aa		4.07	□□□□□ -1.76
PUB1	YNL016W	ARG1	P22768	420 aa		4.07	□□□□□ -1.76
PUB1	YNL016W	CLB3	P24870	427 aa		4.07	□□□□□ -1.76
PUB1	YNL016W	TY2A-C	P25383	438 aa		4.07	□□□□□ -1.76
PUB1	YNL016W	RSC6	P25632	483 aa		4.07	□□□□□ -1.76
PUB1	YNL016W	MSP1	P28737	362 aa		4.07	□□□□□ -1.76
PUB1	YNL016W	EFT1	P32324	842 aa	Known RBP	4.07	□□□□□ -1.76
PUB1	YNL016W	MTC7	P32633	139 aa		4.07	□□□□□ -1.76
PUB1	YNL016W	NIP100	P33420	868 aa		4.07	□□□□□ -1.76
PUB1	YNL016W	HEL1	P36113	551 aa		4.07	□□□□□ -1.76
PUB1	YNL016W	PCH2	P38126	564 aa		4.07	□□□□□ -1.76
PUB1	YNL016W	SRO77	P38163	1010 aa		4.07	□□□□□ -1.76
PUB1	YNL016W	UBP13	P38187	747 aa		4.07	□□□□□ -1.76
PUB1	YNL016W	APN2	P38207	520 aa		4.07	□□□□□ -1.76
PUB1	YNL016W	HSM3	P38348	480 aa		4.07	□□□□□ -1.76
PUB1	YNL016W	FUN12	P39730	1002 aa	Known RBP	4.07	□□□□□ -1.76
PUB1	YNL016W	GIP2	P40036	548 aa		4.07	□□□□□ -1.76
PUB1	YNL016W	RGI2	P40188	164 aa		4.07	□□□□□ -1.76
PUB1	YNL016W	ATF1	P40353	525 aa		4.07	□□□□□ -1.76
PUB1	YNL016W	VMA13	P41807	478 aa	Known RBP	4.07	□□□□□ -1.76
PUB1	YNL016W	SSU1	P41930	458 aa		4.07	□□□□□ -1.76
PUB1	YNL016W	ZIM17	P42844	174 aa		4.07	□□□□□ -1.76
PUB1	YNL016W	AAD10	P47182	288 aa		4.07	□□□□□ -1.76
PUB1	YNL016W	TCB2	P48231	1178 aa		4.07	□□□□□ -1.76
PUB1	YNL016W	GCV2	P49095	1034 aa		4.07	□□□□□ -1.76
PUB1	YNL016W	MNP1	P53163	194 aa	Predicted RBP	4.07	□□□□□ -1.76
PUB1	YNL016W	TY2A-DR2	Q03483	438 aa		4.07	□□□□□ -1.76
PUB1	YNL016W	RAD30	Q04049	632 aa		4.07	□□□□□ -1.76
PUB1	YNL016W	PHO92	Q06390	306 aa		4.07	□□□□□ -1.76
PUB1	YNL016W	SPE3	Q12074	293 aa	Known RBP	4.07	□□□□□ -1.76
PUB1	YNL016W	HOS1	Q12214	470 aa		4.07	□□□□□ -1.76
PUB1	YNL016W	TY2A-B	Q12260	438 aa		4.07	□□□□□ -1.76
PUB1	YNL016W	TY2A-OR2	Q12293	438 aa		4.07	□□□□□ -1.76
PUB1	YNL016W	PSY3	Q12318	242 aa		4.07	□□□□□ -1.76
PUB1	YNL016W	TY2A-DR1	Q12392	438 aa		4.07	□□□□□ -1.76
PUB1	YNL016W	TY2A-OR1	Q12439	438 aa		4.07	□□□□□ -1.76
PUB1	YNL016W	ATG11	Q12527	1178 aa		4.07	□□□□□ -1.76
PUB1	YNL016W	TY2A-DR3	Q99303	438 aa		4.07	□□□□□ -1.76
PUB1	YNL016W	ISN1	Q99312	450 aa		4.07	□□□□□ -1.76
PUB1	YNL016W	CET1	O13297	549 aa	Predicted RBP	4.06	□□□□□ -1.76
PUB1	YNL016W	HEM1	P09950	548 aa	Predicted RBP	4.06	□□□□□ -1.76
PUB1	YNL016W	LAT1	P12695	482 aa	Known RBP	4.06	□□□□□ -1.76
PUB1	YNL016W	CPR2	P23285	205 aa		4.06	□□□□□ -1.76
PUB1	YNL016W	YCR051W	P25631	222 aa		4.06	□□□□□ -1.76
PUB1	YNL016W	PEP3	P27801	918 aa		4.06	□□□□□ -1.76
PUB1	YNL016W	SSE1	P32589	693 aa	Known RBP	4.06	□□□□□ -1.76
PUB1	YNL016W	UTR4	P32626	227 aa		4.06	□□□□□ -1.76
PUB1	YNL016W	SUR1	P33300	382 aa		4.06	□□□□□ -1.76
PUB1	YNL016W	YBL029W	P38201	376 aa		4.06	□□□□□ -1.76
PUB1	YNL016W	VPS45	P38932	577 aa		4.06	□□□□□ -1.76
PUB1	YNL016W	MPT5	P39016	859 aa	Known RBP RIP-Chip data	4.06	□□□□□ -1.76	not detected
PUB1	YNL016W	JHD1	P40034	492 aa		4.06	□□□□□ -1.76
PUB1	YNL016W	EFM4	P40516	257 aa		4.06	□□□□□ -1.76
PUB1	YNL016W	IST3	P40565	148 aa	Predicted RBP	4.06	□□□□□ -1.76
PUB1	YNL016W	MKT1	P40850	830 aa	Known RBP	4.06	□□□□□ -1.76
PUB1	YNL016W	BUD8	P41698	603 aa		4.06	□□□□□ -1.76
PUB1	YNL016W	LAM5	P43560	674 aa		4.06	□□□□□ -1.76
PUB1	YNL016W	AIP1	P46680	615 aa	Known RBP	4.06	□□□□□ -1.76
PUB1	YNL016W	TAF4	P50105	388 aa		4.06	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 19.1 ms