RNA–Protein interactions for RNA: YML029W

USA1, Transcript of Scaffold subunit of the Hrd1p ubiquitin ligase, yeastyeast

Gene USA1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
USA1YML029W NRD1P53617 575 aaKnown RBP RIP-Chip data3.92□□□□□ -1.78not detected
USA1YML029W RCF2P53721 224 aa3.92□□□□□ -1.78
USA1YML029W TRM112P53738 135 aaPredicted RBP3.92□□□□□ -1.78
USA1YML029W SPP2Q02521 185 aa3.92□□□□□ -1.78
USA1YML029W USA1Q03714 838 aa3.92□□□□□ -1.78
USA1YML029W YDR131CQ03899 556 aa3.92□□□□□ -1.78
USA1YML029W YCS4Q06156 1176 aa3.92□□□□□ -1.78
USA1YML029W OMS1Q06668 471 aa3.92□□□□□ -1.78
USA1YML029W YOR012WQ12351 137 aa3.92□□□□□ -1.78
USA1YML029W FUR4P05316 633 aaKnown RBP3.91□□□□□ -1.78
USA1YML029W AMD2P22580 549 aa3.91□□□□□ -1.78
USA1YML029W CDC20P26309 610 aa3.91□□□□□ -1.78
USA1YML029W MRS6P32864 603 aaKnown RBP3.91□□□□□ -1.78
USA1YML029W URA8P38627 578 aaPredicted RBP3.91□□□□□ -1.78
USA1YML029W PCF11P39081 626 aaPredicted RBP3.91□□□□□ -1.78
USA1YML029W PIK1P39104 1066 aa3.91□□□□□ -1.78
USA1YML029W MNN1P39106 762 aa3.91□□□□□ -1.78
USA1YML029W GDH3P39708 457 aa3.91□□□□□ -1.78
USA1YML029W RGI2P40188 164 aa3.91□□□□□ -1.78
USA1YML029W ALA1P40825 983 aaKnown RBP3.91□□□□□ -1.78
USA1YML029W CNN1P43618 361 aa3.91□□□□□ -1.78
USA1YML029W GCD14P46959 383 aaPredicted RBP3.91□□□□□ -1.78
USA1YML029W SET2P46995 733 aaKnown RBP3.91□□□□□ -1.78
USA1YML029W TAH11P47112 604 aa3.91□□□□□ -1.78
USA1YML029W ZIP2P53061 704 aa3.91□□□□□ -1.78
USA1YML029W NPL3Q01560 414 aaKnown RBP RIP-Chip data3.91□□□□□ -1.78not detected
USA1YML029W PET117Q02771 107 aa3.91□□□□□ -1.78
USA1YML029W YDL121CQ07541 149 aa3.91□□□□□ -1.78
USA1YML029W VHS3Q08438 674 aa3.91□□□□□ -1.78
USA1YML029W PER33Q12144 273 aa3.91□□□□□ -1.78
USA1YML029W ILV2P07342 687 aaKnown RBP3.91□□□□□ -1.78
USA1YML029W HAP4P14064 554 aa3.91□□□□□ -1.78
USA1YML029W POL30P15873 258 aaKnown RBP3.91□□□□□ -1.78
USA1YML029W MSH1P25846 959 aa3.91□□□□□ -1.78
USA1YML029W GUT2P32191 649 aa3.91□□□□□ -1.78
USA1YML029W UTR2P32623 467 aa3.91□□□□□ -1.78
USA1YML029W OAF3P36023 863 aa3.91□□□□□ -1.78
USA1YML029W MRP21P38175 177 aa3.91□□□□□ -1.78
USA1YML029W YBP1P38315 674 aa3.91□□□□□ -1.78
USA1YML029W YHR078WP38799 552 aa3.91□□□□□ -1.78
USA1YML029W YIR007WP40566 764 aa3.91□□□□□ -1.78
USA1YML029W TFG1P41895 735 aaPredicted RBP3.91□□□□□ -1.78
USA1YML029W YGL140CP53120 1219 aa3.91□□□□□ -1.78
USA1YML029W PIR1Q03178 341 aa3.91□□□□□ -1.78
USA1YML029W UTP13Q05946 817 aaKnown RBP3.91□□□□□ -1.78
USA1YML029W YOL036WQ08206 761 aa3.91□□□□□ -1.78
USA1YML029W OCA6Q12454 224 aa3.91□□□□□ -1.78
USA1YML029W LSO1Q3E827 93 aa3.91□□□□□ -1.78
USA1YML029W MDM35O60200 86 aa3.9□□□□□ -1.78
USA1YML029W COX5AP00424 153 aa3.9□□□□□ -1.78
USA1YML029W CLN1P20437 546 aa3.9□□□□□ -1.78
USA1YML029W AEP1P32493 518 aa3.9□□□□□ -1.78
USA1YML029W IMP3P32899 183 aaPredicted RBP3.9□□□□□ -1.78
USA1YML029W PMT1P33775 817 aa3.9□□□□□ -1.78
USA1YML029W YPT52P36018 234 aaKnown RBP3.9□□□□□ -1.78
USA1YML029W SRP72P38688 640 aaKnown RBP3.9□□□□□ -1.78
USA1YML029W SPC97P38863 823 aa3.9□□□□□ -1.78
USA1YML029W SEO1P39709 593 aa3.9□□□□□ -1.78
USA1YML029W IME4P41833 600 aa3.9□□□□□ -1.78
USA1YML029W GLG2P47011 380 aa3.9□□□□□ -1.78
USA1YML029W GND2P53319 492 aa3.9□□□□□ -1.78
USA1YML029W YML119WQ03208 357 aa3.9□□□□□ -1.78
USA1YML029W YMR178WQ03219 274 aaKnown RBP3.9□□□□□ -1.78
USA1YML029W YMR160WQ03823 816 aa3.9□□□□□ -1.78
USA1YML029W CIA1Q05583 330 aa3.9□□□□□ -1.78
USA1YML029W ADE13Q05911 482 aaKnown RBP3.9□□□□□ -1.78
USA1YML029W BUD7Q08754 746 aa3.9□□□□□ -1.78
USA1YML029W INH1P01097 85 aa3.9□□□□□ -1.79
USA1YML029W MSF1P08425 469 aa3.9□□□□□ -1.79
USA1YML029W ARF2P19146 181 aaKnown RBP3.9□□□□□ -1.79
USA1YML029W PMA2P19657 947 aa3.9□□□□□ -1.79
USA1YML029W ATP12P22135 325 aa3.9□□□□□ -1.79
USA1YML029W UBA1P22515 1024 aaKnown RBP3.9□□□□□ -1.79
USA1YML029W GID7P25569 745 aa3.9□□□□□ -1.79
USA1YML029W CCR4P31384 837 aaKnown RBP3.9□□□□□ -1.79
USA1YML029W SPS19P32573 292 aaKnown RBP3.9□□□□□ -1.79
USA1YML029W SOH1P38633 127 aa3.9□□□□□ -1.79
USA1YML029W SSP120P39931 234 aaKnown RBP3.9□□□□□ -1.79
USA1YML029W HAT2P39984 401 aa3.9□□□□□ -1.79
USA1YML029W YJR142WP47173 342 aa3.9□□□□□ -1.79
USA1YML029W AMA1P50082 593 aa3.9□□□□□ -1.79
USA1YML029W YGL108CP53139 140 aa3.9□□□□□ -1.79
USA1YML029W NMA2P53204 395 aa3.9□□□□□ -1.79
USA1YML029W NUP100Q02629 959 aa3.9□□□□□ -1.79
USA1YML029W NHX1Q04121 633 aa3.9□□□□□ -1.79
USA1YML029W TEF1P02994 458 aaKnown RBP3.89□□□□□ -1.79
USA1YML029W RSR1P13856 272 aa3.89□□□□□ -1.79
USA1YML029W GCY1P14065 312 aaKnown RBP RIP-Chip data3.89□□□□□ -1.79not detected
USA1YML029W YCR051WP25631 222 aa3.89□□□□□ -1.79
USA1YML029W HRR25P29295 494 aaKnown RBP3.89□□□□□ -1.79
USA1YML029W TFA2P36145 328 aa3.89□□□□□ -1.79
USA1YML029W DBP8P38719 431 aa3.89□□□□□ -1.79
USA1YML029W MNT2P53059 558 aa3.89□□□□□ -1.79
USA1YML029W COG1P53079 417 aa3.89□□□□□ -1.79
USA1YML029W SWC4P53201 476 aa3.89□□□□□ -1.79
USA1YML029W ADE12P80210 433 aaKnown RBP3.89□□□□□ -1.79
USA1YML029W SLU7Q02775 382 aaKnown RBP3.89□□□□□ -1.79
USA1YML029W CDC123Q05791 360 aa3.89□□□□□ -1.79
USA1YML029W TDA5Q06417 326 aaKnown RBP3.89□□□□□ -1.79
USA1YML029W GRS2Q06817 618 aa3.89□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 27.7 ms