RNA–Protein interactions for RNA: YLR039C

RIC1, Transcript of Protein involved in retrograde transport to the cis-Golgi network, yeast

Gene RIC1, Length 3,171 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RIC1	YLR039C	IMD3	P50095	523 aa	Known RBP	2.23	□□□□□ -2.05
RIC1	YLR039C	MRPL19	P53875	158 aa		2.23	□□□□□ -2.05
RIC1	YLR039C	YAT1	P80235	687 aa		2.23	□□□□□ -2.05
RIC1	YLR039C	UTP21	Q06078	939 aa	Predicted RBP	2.23	□□□□□ -2.05
RIC1	YLR039C	HUA2	Q12134	243 aa		2.23	□□□□□ -2.05
RIC1	YLR039C	NBP2	Q12163	236 aa		2.23	□□□□□ -2.05
RIC1	YLR039C	TAH18	Q12181	623 aa		2.23	□□□□□ -2.05
RIC1	YLR039C	PGA3	Q12746	312 aa	Known RBP	2.23	□□□□□ -2.05
RIC1	YLR039C	PET111	P08468	800 aa		2.22	□□□□□ -2.05
RIC1	YLR039C	KES1	P35844	434 aa	Known RBP	2.22	□□□□□ -2.05
RIC1	YLR039C	YGR250C	P53316	781 aa	Known RBP	2.22	□□□□□ -2.05
RIC1	YLR039C	YPL071C	Q02864	156 aa		2.22	□□□□□ -2.05
RIC1	YLR039C	SKG3	Q06315	1026 aa		2.22	□□□□□ -2.05
RIC1	YLR039C	IRC10	Q08118	586 aa		2.22	□□□□□ -2.05
RIC1	YLR039C	YPL272C	Q08984	517 aa		2.22	□□□□□ -2.05
RIC1	YLR039C	NMD4	Q12129	218 aa		2.22	□□□□□ -2.05
RIC1	YLR039C	ARG3	P05150	338 aa		2.22	□□□□□ -2.05
RIC1	YLR039C	CDC43	P18898	376 aa		2.22	□□□□□ -2.05
RIC1	YLR039C	DMC1	P25453	334 aa		2.22	□□□□□ -2.05
RIC1	YLR039C	UGP1	P32861	499 aa	Known RBP	2.22	□□□□□ -2.05
RIC1	YLR039C	YEL057C	P39983	233 aa		2.22	□□□□□ -2.05
RIC1	YLR039C	YEL020C	P39994	560 aa		2.22	□□□□□ -2.05
RIC1	YLR039C	LAS21	P40367	830 aa		2.22	□□□□□ -2.05
RIC1	YLR039C	YFR020W	P43600	232 aa		2.22	□□□□□ -2.05
RIC1	YLR039C	GFD1	Q04839	188 aa	Known RBP	2.22	□□□□□ -2.05
RIC1	YLR039C	ARP9	Q05123	467 aa		2.22	□□□□□ -2.05
RIC1	YLR039C	CTI6	Q08923	506 aa		2.22	□□□□□ -2.05
RIC1	YLR039C	YPL191C	Q08930	360 aa		2.22	□□□□□ -2.05
RIC1	YLR039C	BAG7	Q12128	409 aa		2.22	□□□□□ -2.05
RIC1	YLR039C	PNS1	Q12412	539 aa		2.22	□□□□□ -2.05
RIC1	YLR039C	HSH49	Q99181	213 aa	Predicted RBP	2.22	□□□□□ -2.05
RIC1	YLR039C	DNA2	P38859	1522 aa		2.22	□□□□□ -2.05
RIC1	YLR039C	PEP1	P32319	1579 aa		2.22	□□□□□ -2.05
RIC1	YLR039C	YBR085C-A	O43137	85 aa		2.22	□□□□□ -2.05
RIC1	YLR039C	PTC6	P25646	442 aa		2.22	□□□□□ -2.05
RIC1	YLR039C	TFC3	P34111	1160 aa		2.22	□□□□□ -2.05
RIC1	YLR039C	AUR1	P36107	401 aa	Predicted RBP	2.22	□□□□□ -2.05
RIC1	YLR039C	ADE17	P38009	592 aa	Known RBP	2.22	□□□□□ -2.05
RIC1	YLR039C	SPO22	P40511	975 aa		2.22	□□□□□ -2.05
RIC1	YLR039C	YJL043W	P47053	257 aa		2.22	□□□□□ -2.05
RIC1	YLR039C	SRB7	P47822	140 aa		2.22	□□□□□ -2.05
RIC1	YLR039C	RPS7B	P48164	190 aa	Known RBP	2.22	□□□□□ -2.05
RIC1	YLR039C	SGS1	P35187	1447 aa		2.21	□□□□□ -2.06
RIC1	YLR039C	YER145C-A	A0A023PYF4	145 aa		2.21	□□□□□ -2.06
RIC1	YLR039C	SEC53	P07283	254 aa	Known RBP	2.21	□□□□□ -2.06
RIC1	YLR039C	CHO1	P08456	276 aa		2.21	□□□□□ -2.06
RIC1	YLR039C	MAK32	P23060	363 aa		2.21	□□□□□ -2.06
RIC1	YLR039C	JNM1	P36224	373 aa		2.21	□□□□□ -2.06
RIC1	YLR039C	RKM3	P38222	552 aa		2.21	□□□□□ -2.06
RIC1	YLR039C	CCT6	P39079	546 aa		2.21	□□□□□ -2.06
RIC1	YLR039C	CDC1	P40986	491 aa		2.21	□□□□□ -2.06
RIC1	YLR039C	RSM28	Q03430	361 aa		2.21	□□□□□ -2.06
RIC1	YLR039C	ATG9	Q12142	997 aa		2.21	□□□□□ -2.06
RIC1	YLR039C	CBS1	P14066	229 aa		2.21	□□□□□ -2.06
RIC1	YLR039C	KGD1	P20967	1014 aa	Known RBP	2.21	□□□□□ -2.06
RIC1	YLR039C	PWP1	P21304	576 aa	Known RBP	2.21	□□□□□ -2.06
RIC1	YLR039C	ORC2	P32833	620 aa		2.21	□□□□□ -2.06
RIC1	YLR039C	FLO10	P36170	1169 aa		2.21	□□□□□ -2.06
RIC1	YLR039C	YBL029W	P38201	376 aa		2.21	□□□□□ -2.06
RIC1	YLR039C	FLC2	P39719	783 aa		2.21	□□□□□ -2.06
RIC1	YLR039C	MAF1	P41910	395 aa		2.21	□□□□□ -2.06
RIC1	YLR039C	SGM1	P47166	707 aa		2.21	□□□□□ -2.06
RIC1	YLR039C	YML037C	Q03703	340 aa		2.21	□□□□□ -2.06
RIC1	YLR039C	URN1	Q06525	465 aa	Known RBP	2.21	□□□□□ -2.06
RIC1	YLR039C	LEA1	Q08963	238 aa	Predicted RBP	2.21	□□□□□ -2.06
RIC1	YLR039C	ARD1	P07347	238 aa	Predicted RBP	2.2	□□□□□ -2.06
RIC1	YLR039C	AAP1	P37898	856 aa	Known RBP	2.2	□□□□□ -2.06
RIC1	YLR039C	ECM10	P39987	644 aa		2.2	□□□□□ -2.06
RIC1	YLR039C	GLO1	P50107	326 aa		2.2	□□□□□ -2.06
RIC1	YLR039C	RRG1	Q12167	365 aa	Predicted RBP	2.2	□□□□□ -2.06
RIC1	YLR039C	GCN4	P03069	281 aa		2.2	□□□□□ -2.06
RIC1	YLR039C	ADE5,7	P07244	802 aa	Known RBP	2.2	□□□□□ -2.06
RIC1	YLR039C	ILV2	P07342	687 aa	Known RBP	2.2	□□□□□ -2.06
RIC1	YLR039C	HEM1	P09950	548 aa	Predicted RBP	2.2	□□□□□ -2.06
RIC1	YLR039C	ADY2	P25613	283 aa		2.2	□□□□□ -2.06
RIC1	YLR039C	PEP3	P27801	918 aa		2.2	□□□□□ -2.06
RIC1	YLR039C	BUR6	P40096	142 aa		2.2	□□□□□ -2.06
RIC1	YLR039C	VTC2	P43585	828 aa		2.2	□□□□□ -2.06
RIC1	YLR039C	TAX4	P47030	604 aa		2.2	□□□□□ -2.06
RIC1	YLR039C	FMP30	Q02883	468 aa		2.2	□□□□□ -2.06
RIC1	YLR039C	INA17	Q02888	182 aa		2.2	□□□□□ -2.06
RIC1	YLR039C	BUD7	Q08754	746 aa		2.2	□□□□□ -2.06
RIC1	YLR039C	GET3	Q12154	354 aa	Known RBP	2.2	□□□□□ -2.06
RIC1	YLR039C	ERP4	Q12450	207 aa		2.2	□□□□□ -2.06
RIC1	YLR039C	NOP58	Q12499	511 aa	Known RBP	2.2	□□□□□ -2.06
RIC1	YLR039C	CKA1	P15790	372 aa		2.2	□□□□□ -2.06
RIC1	YLR039C	PRE8	P23639	250 aa		2.2	□□□□□ -2.06
RIC1	YLR039C	ROX1	P25042	368 aa		2.2	□□□□□ -2.06
RIC1	YLR039C	PGS1	P25578	521 aa		2.2	□□□□□ -2.06
RIC1	YLR039C	SYN8	P31377	255 aa		2.2	□□□□□ -2.06
RIC1	YLR039C	ERG3	P32353	365 aa		2.2	□□□□□ -2.06
RIC1	YLR039C	PAC2	P39937	518 aa		2.2	□□□□□ -2.06
RIC1	YLR039C	RGI2	P40188	164 aa		2.2	□□□□□ -2.06
RIC1	YLR039C	DOT5	P40553	215 aa		2.2	□□□□□ -2.06
RIC1	YLR039C	DCP2	P53550	970 aa	Known RBP	2.2	□□□□□ -2.06
RIC1	YLR039C	SYF1	Q04048	859 aa	Predicted RBP	2.2	□□□□□ -2.06
RIC1	YLR039C	YLR287C	Q05881	355 aa		2.2	□□□□□ -2.06
RIC1	YLR039C	ARO10	Q06408	635 aa		2.2	□□□□□ -2.06
RIC1	YLR039C	RTT109	Q07794	436 aa		2.2	□□□□□ -2.06
RIC1	YLR039C	TCO89	Q08921	799 aa		2.2	□□□□□ -2.06

Retrieved 100 of 5,963 RNA–protein pairs in 18.6 ms