RNA–Protein interactions for RNA: YLR022C

SDO1, Transcript of Guanine nucleotide exchange factor (GEF) for Ria1p, yeastyeast

Gene SDO1, Length 753 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDO1YLR022C LTP1P40347 161 aa3.56□□□□□ -1.84
SDO1YLR022C VID28P40547 921 aa3.56□□□□□ -1.84
SDO1YLR022C BNA3P47039 444 aaKnown RBP3.56□□□□□ -1.84
SDO1YLR022C YGL081WP53156 320 aa3.56□□□□□ -1.84
SDO1YLR022C YGR054WP53235 642 aaKnown RBP3.56□□□□□ -1.84
SDO1YLR022C EFR3Q03653 782 aaKnown RBP3.56□□□□□ -1.84
SDO1YLR022C YGR161W-CQ3E744 92 aa3.56□□□□□ -1.84
SDO1YLR022C RPS21AP0C0V8 87 aaKnown RBP3.55□□□□□ -1.84
SDO1YLR022C ERG11P10614 530 aa3.55□□□□□ -1.84
SDO1YLR022C PMA2P19657 947 aa3.55□□□□□ -1.84
SDO1YLR022C HOP1P20050 605 aa3.55□□□□□ -1.84
SDO1YLR022C PGS1P25578 521 aa3.55□□□□□ -1.84
SDO1YLR022C AAD3P25612 363 aa3.55□□□□□ -1.84
SDO1YLR022C GPP1P41277 250 aaKnown RBP3.55□□□□□ -1.84
SDO1YLR022C DUG1P43616 481 aaKnown RBP3.55□□□□□ -1.84
SDO1YLR022C TAX4P47030 604 aa3.55□□□□□ -1.84
SDO1YLR022C YIP4P53093 235 aa3.55□□□□□ -1.84
SDO1YLR022C IMP4P53941 290 aaKnown RBP3.55□□□□□ -1.84
SDO1YLR022C TRS23Q03784 219 aa3.55□□□□□ -1.84
SDO1YLR022C CSI1Q04368 295 aa3.55□□□□□ -1.84
SDO1YLR022C PLP2Q12017 286 aa3.55□□□□□ -1.84
SDO1YLR022C PKH2Q12236 1081 aaKnown RBP3.55□□□□□ -1.84
SDO1YLR022C CHO2P05374 869 aaKnown RBP3.54□□□□□ -1.84
SDO1YLR022C ATP1P07251 545 aaKnown RBP3.54□□□□□ -1.84
SDO1YLR022C SES1P07284 462 aaKnown RBP3.54□□□□□ -1.84
SDO1YLR022C SIR1P21691 654 aa3.54□□□□□ -1.84
SDO1YLR022C PWP2P25635 923 aaKnown RBP3.54□□□□□ -1.84
SDO1YLR022C CNE1P27825 502 aa3.54□□□□□ -1.84
SDO1YLR022C HOT13P36078 116 aa3.54□□□□□ -1.84
SDO1YLR022C UTH1P36135 365 aa3.54□□□□□ -1.84
SDO1YLR022C PIH1P38768 344 aa3.54□□□□□ -1.84
SDO1YLR022C YDL183CP48569 320 aa3.54□□□□□ -1.84
SDO1YLR022C GLO1P50107 326 aa3.54□□□□□ -1.84
SDO1YLR022C YRB30P53107 440 aaPredicted RBP3.54□□□□□ -1.84
SDO1YLR022C PIB2P53191 635 aa3.54□□□□□ -1.84
SDO1YLR022C RPS15Q01855 142 aaKnown RBP3.54□□□□□ -1.84
SDO1YLR022C NCB2Q92317 146 aa3.54□□□□□ -1.84
SDO1YLR022C LAA1P39526 2014 aa3.53□□□□□ -1.84
SDO1YLR022C CPA2P03965 1118 aaKnown RBP3.53□□□□□ -1.84
SDO1YLR022C RPL7AP05737 244 aaKnown RBP3.53□□□□□ -1.84
SDO1YLR022C WHI2P12611 486 aa3.53□□□□□ -1.84
SDO1YLR022C COQ1P18900 473 aa3.53□□□□□ -1.84
SDO1YLR022C RIT1P23796 513 aa3.53□□□□□ -1.84
SDO1YLR022C TFB1P32776 642 aa3.53□□□□□ -1.84
SDO1YLR022C WBP1P33767 430 aaKnown RBP3.53□□□□□ -1.84
SDO1YLR022C DHR2P36009 735 aaPredicted RBP3.53□□□□□ -1.84
SDO1YLR022C CSM2P40465 213 aa3.53□□□□□ -1.84
SDO1YLR022C LAM5P43560 674 aa3.53□□□□□ -1.84
SDO1YLR022C YGR237CP50089 785 aa3.53□□□□□ -1.84
SDO1YLR022C MFM1Q02783 413 aa3.53□□□□□ -1.84
SDO1YLR022C ARR3Q06598 404 aa3.53□□□□□ -1.84
SDO1YLR022C YCG1Q06680 1035 aa3.53□□□□□ -1.84
SDO1YLR022C YDL073WQ07454 984 aa3.53□□□□□ -1.84
SDO1YLR022C AIM41Q12032 185 aa3.53□□□□□ -1.84
SDO1YLR022C RPL7BQ12213 244 aaKnown RBP3.53□□□□□ -1.84
SDO1YLR022C HIF1Q12373 385 aa3.53□□□□□ -1.84
SDO1YLR022C ZPS1Q12512 249 aa3.53□□□□□ -1.84
SDO1YLR022C TRA1P38811 3744 aa3.52□□□□□ -1.85
SDO1YLR022C RPS19AP07280 144 aaKnown RBP3.52□□□□□ -1.85
SDO1YLR022C RPS19BP07281 144 aaPredicted RBP3.52□□□□□ -1.85
SDO1YLR022C TSR4P25040 408 aa3.52□□□□□ -1.85
SDO1YLR022C VPH1P32563 840 aaKnown RBP3.52□□□□□ -1.85
SDO1YLR022C DUG2P38149 878 aa3.52□□□□□ -1.85
SDO1YLR022C RXT2P38255 430 aa3.52□□□□□ -1.85
SDO1YLR022C YHR033WP38690 423 aa3.52□□□□□ -1.85
SDO1YLR022C LRO1P40345 661 aa3.52□□□□□ -1.85
SDO1YLR022C CHS6P40955 746 aa3.52□□□□□ -1.85
SDO1YLR022C COQ6P53318 479 aa3.52□□□□□ -1.85
SDO1YLR022C BUD17P53727 317 aa3.52□□□□□ -1.85
SDO1YLR022C SDH5Q08230 162 aa3.52□□□□□ -1.85
SDO1YLR022C YPL216WQ08964 1102 aa3.52□□□□□ -1.85
SDO1YLR022C FAP7Q12055 197 aaPredicted RBP3.52□□□□□ -1.85
SDO1YLR022C AI5_ALPHAQ9ZZX1 630 aa3.52□□□□□ -1.85
SDO1YLR022C TUF1P02992 437 aaKnown RBP3.51□□□□□ -1.85
SDO1YLR022C ADE4P04046 510 aaKnown RBP3.51□□□□□ -1.85
SDO1YLR022C HAP2P06774 265 aa3.51□□□□□ -1.85
SDO1YLR022C SSB1P11484 613 aaKnown RBP3.51□□□□□ -1.85
SDO1YLR022C KGD2P19262 463 aaPredicted RBP3.51□□□□□ -1.85
SDO1YLR022C NUP1P20676 1076 aa3.51□□□□□ -1.85
SDO1YLR022C APN1P22936 367 aa3.51□□□□□ -1.85
SDO1YLR022C PTP1P25044 335 aa3.51□□□□□ -1.85
SDO1YLR022C RSA4P25382 515 aaKnown RBP3.51□□□□□ -1.85
SDO1YLR022C CAP1P28495 268 aaKnown RBP3.51□□□□□ -1.85
SDO1YLR022C GPI10P30777 616 aa3.51□□□□□ -1.85
SDO1YLR022C HEL1P36113 551 aa3.51□□□□□ -1.85
SDO1YLR022C HMT1P38074 348 aa3.51□□□□□ -1.85
SDO1YLR022C EHT1P38295 451 aa3.51□□□□□ -1.85
SDO1YLR022C NAB3P38996 802 aaKnown RBP RIP-Chip data3.51□□□□□ -1.85not detected
SDO1YLR022C UME6P39001 836 aa3.51□□□□□ -1.85
SDO1YLR022C PTI1P39927 425 aaPredicted RBP3.51□□□□□ -1.85
SDO1YLR022C SSB2P40150 613 aaKnown RBP3.51□□□□□ -1.85
SDO1YLR022C TPM2P40414 161 aa3.51□□□□□ -1.85
SDO1YLR022C ATG36P46983 293 aa3.51□□□□□ -1.85
SDO1YLR022C YGL242CP53066 181 aa3.51□□□□□ -1.85
SDO1YLR022C SEC5P89102 971 aa3.51□□□□□ -1.85
SDO1YLR022C RPT6Q01939 405 aaKnown RBP3.51□□□□□ -1.85
SDO1YLR022C USA1Q03714 838 aa3.51□□□□□ -1.85
SDO1YLR022C CRD1Q07560 283 aa3.51□□□□□ -1.85
SDO1YLR022C DNL4Q08387 944 aaPredicted RBP3.51□□□□□ -1.85
SDO1YLR022C NOP56Q12460 504 aaKnown RBP RIP-Chip data3.51□□□□□ -1.85not detected
Retrieved 100 of 5,963 RNA–protein pairs in 11.7 ms