RNA–Protein interactions for RNA: YKR101W

SIR1, Transcript of Protein involved in silencing at mating-type loci HML and HMR, yeast

Gene SIR1, Length 1,965 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SIR1	YKR101W	CTS1	P29029	562 aa		4.89	□□□□□ -1.63
SIR1	YKR101W	APE4	P38821	490 aa		4.89	□□□□□ -1.63
SIR1	YKR101W	MIT1	P40002	666 aa		4.89	□□□□□ -1.63
SIR1	YKR101W	MET28	P40573	187 aa		4.89	□□□□□ -1.63
SIR1	YKR101W	BUD7	Q08754	746 aa		4.89	□□□□□ -1.63
SIR1	YKR101W	TCO89	Q08921	799 aa		4.89	□□□□□ -1.63
SIR1	YKR101W	PCL8	Q08966	492 aa		4.89	□□□□□ -1.63
SIR1	YKR101W	SFI1	Q12369	946 aa		4.89	□□□□□ -1.63
SIR1	YKR101W	PEP1	P32319	1579 aa		4.88	□□□□□ -1.63
SIR1	YKR101W	CPA2	P03965	1118 aa	Known RBP	4.88	□□□□□ -1.63
SIR1	YKR101W	RNR3	P21672	869 aa	Known RBP	4.88	□□□□□ -1.63
SIR1	YKR101W	GPI10	P30777	616 aa		4.88	□□□□□ -1.63
SIR1	YKR101W	ORC2	P32833	620 aa		4.88	□□□□□ -1.63
SIR1	YKR101W	LOT5	P34234	306 aa		4.88	□□□□□ -1.63
SIR1	YKR101W	PCL5	P38794	229 aa		4.88	□□□□□ -1.63
SIR1	YKR101W	NDC80	P40460	691 aa		4.88	□□□□□ -1.63
SIR1	YKR101W	DJP1	P40564	432 aa		4.88	□□□□□ -1.63
SIR1	YKR101W	YAT1	P80235	687 aa		4.88	□□□□□ -1.63
SIR1	YKR101W	KIN4	Q01919	800 aa		4.88	□□□□□ -1.63
SIR1	YKR101W	INA17	Q02888	182 aa		4.88	□□□□□ -1.63
SIR1	YKR101W	ERO1	Q03103	563 aa		4.88	□□□□□ -1.63
SIR1	YKR101W	SWA2	Q06677	668 aa		4.88	□□□□□ -1.63
SIR1	YKR101W	TGS1	Q12052	315 aa		4.88	□□□□□ -1.63
SIR1	YKR101W	HSP82	P02829	709 aa	Known RBP	4.87	□□□□□ -1.63
SIR1	YKR101W	NAT1	P12945	854 aa	Known RBP	4.87	□□□□□ -1.63
SIR1	YKR101W	REG2	P38232	338 aa		4.87	□□□□□ -1.63
SIR1	YKR101W	MTG2	P38860	518 aa		4.87	□□□□□ -1.63
SIR1	YKR101W	SMF1	P38925	575 aa		4.87	□□□□□ -1.63
SIR1	YKR101W	DOT5	P40553	215 aa		4.87	□□□□□ -1.63
SIR1	YKR101W	ECM22	Q05958	814 aa	Predicted RBP	4.87	□□□□□ -1.63
SIR1	YKR101W	PWP1	P21304	576 aa	Known RBP	4.87	□□□□□ -1.63
SIR1	YKR101W	DBF4	P32325	704 aa		4.87	□□□□□ -1.63
SIR1	YKR101W	SAS3	P34218	831 aa		4.87	□□□□□ -1.63
SIR1	YKR101W	NTR2	P36118	322 aa	Predicted RBP	4.87	□□□□□ -1.63
SIR1	YKR101W	GMH1	P36125	273 aa		4.87	□□□□□ -1.63
SIR1	YKR101W	CBR1	P38626	284 aa	Known RBP	4.87	□□□□□ -1.63
SIR1	YKR101W	FUN12	P39730	1002 aa	Known RBP	4.87	□□□□□ -1.63
SIR1	YKR101W	MAM1	P40065	302 aa		4.87	□□□□□ -1.63
SIR1	YKR101W	ROK1	P45818	564 aa	Predicted RBP	4.87	□□□□□ -1.63
SIR1	YKR101W	ADE16	P54113	591 aa	Known RBP	4.87	□□□□□ -1.63
SIR1	YKR101W	MUK1	Q02866	612 aa		4.87	□□□□□ -1.63
SIR1	YKR101W	YMR206W	Q03695	313 aa		4.87	□□□□□ -1.63
SIR1	YKR101W	YDR109C	Q04585	715 aa		4.87	□□□□□ -1.63
SIR1	YKR101W	BAG7	Q12128	409 aa		4.87	□□□□□ -1.63
SIR1	YKR101W	YJR112W-A	Q3E743	109 aa		4.87	□□□□□ -1.63
SIR1	YKR101W	SIN3	P22579	1536 aa		4.86	□□□□□ -1.63
SIR1	YKR101W	ARD1	P07347	238 aa	Predicted RBP	4.86	□□□□□ -1.63
SIR1	YKR101W	RRP43	P25359	394 aa	Predicted RBP	4.86	□□□□□ -1.63
SIR1	YKR101W	ADK2	P26364	225 aa		4.86	□□□□□ -1.63
SIR1	YKR101W	SIP1	P32578	815 aa		4.86	□□□□□ -1.63
SIR1	YKR101W	ARG2	P40360	574 aa		4.86	□□□□□ -1.63
SIR1	YKR101W	CCT7	P42943	550 aa	Known RBP	4.86	□□□□□ -1.63
SIR1	YKR101W	MSE1	P48525	536 aa		4.86	□□□□□ -1.63
SIR1	YKR101W	SGF73	P53165	657 aa		4.86	□□□□□ -1.63
SIR1	YKR101W	RAD33	Q04231	177 aa		4.86	□□□□□ -1.63
SIR1	YKR101W	PSR1	Q07800	427 aa		4.86	□□□□□ -1.63
SIR1	YKR101W	PDB1	P32473	366 aa	Known RBP	4.85	□□□□□ -1.63
SIR1	YKR101W	RPF2	P36160	344 aa	Known RBP	4.85	□□□□□ -1.63
SIR1	YKR101W	YMC2	P38087	329 aa		4.85	□□□□□ -1.63
SIR1	YKR101W	YJL068C	P40363	299 aa		4.85	□□□□□ -1.63
SIR1	YKR101W	MAF1	P41910	395 aa		4.85	□□□□□ -1.63
SIR1	YKR101W	CTK2	P46962	323 aa		4.85	□□□□□ -1.63
SIR1	YKR101W	CTR1	P49573	406 aa		4.85	□□□□□ -1.63
SIR1	YKR101W	RCF1	Q03713	159 aa		4.85	□□□□□ -1.63
SIR1	YKR101W	YDL073W	Q07454	984 aa		4.85	□□□□□ -1.63
SIR1	YKR101W	CRT10	Q08226	957 aa		4.85	□□□□□ -1.63
SIR1	YKR101W	ISN1	Q99312	450 aa		4.85	□□□□□ -1.63
SIR1	YKR101W	CDC60	P26637	1090 aa	Known RBP	4.85	□□□□□ -1.63
SIR1	YKR101W	LAC1	P28496	418 aa		4.85	□□□□□ -1.63
SIR1	YKR101W	DPH2	P32461	534 aa		4.85	□□□□□ -1.63
SIR1	YKR101W	SAP1	P39955	897 aa	Known RBP	4.85	□□□□□ -1.63
SIR1	YKR101W	RPS7B	P48164	190 aa	Known RBP	4.85	□□□□□ -1.63
SIR1	YKR101W	HRD3	Q05787	833 aa		4.85	□□□□□ -1.63
SIR1	YKR101W	ATG2	P53855	1592 aa		4.84	□□□□□ -1.63
SIR1	YKR101W	SES1	P07284	462 aa	Known RBP	4.84	□□□□□ -1.63
SIR1	YKR101W	APE1	P14904	514 aa		4.84	□□□□□ -1.63
SIR1	YKR101W	GCS1	P35197	352 aa		4.84	□□□□□ -1.63
SIR1	YKR101W	COQ6	P53318	479 aa		4.84	□□□□□ -1.63
SIR1	YKR101W	YOL159C	Q08300	171 aa		4.84	□□□□□ -1.63
SIR1	YKR101W	ZPS1	Q12512	249 aa		4.84	□□□□□ -1.63
SIR1	YKR101W	WHI2	P12611	486 aa		4.84	□□□□□ -1.64
SIR1	YKR101W	YIH1	P25637	258 aa		4.84	□□□□□ -1.64
SIR1	YKR101W	UBP11	P36026	717 aa		4.84	□□□□□ -1.64
SIR1	YKR101W	AAP1	P37898	856 aa	Known RBP	4.84	□□□□□ -1.64
SIR1	YKR101W	CST26	P38226	397 aa		4.84	□□□□□ -1.64
SIR1	YKR101W	PIH1	P38768	344 aa		4.84	□□□□□ -1.64
SIR1	YKR101W	YNG2	P38806	282 aa	Known RBP	4.84	□□□□□ -1.64
SIR1	YKR101W	UBX6	P47049	396 aa		4.84	□□□□□ -1.64
SIR1	YKR101W	STR3	P53101	465 aa	Known RBP	4.84	□□□□□ -1.64
SIR1	YKR101W	RMT2	Q03305	412 aa		4.84	□□□□□ -1.64
SIR1	YKR101W	RSM28	Q03430	361 aa		4.84	□□□□□ -1.64
SIR1	YKR101W	PLM2	Q04383	521 aa		4.84	□□□□□ -1.64
SIR1	YKR101W	MRD1	Q06106	887 aa	Known RBP	4.84	□□□□□ -1.64
SIR1	YKR101W	IRC3	Q06683	689 aa		4.84	□□□□□ -1.64
SIR1	YKR101W	RIM20	Q12033	661 aa		4.84	□□□□□ -1.64
SIR1	YKR101W	DFR1	P07807	211 aa	Known RBP RIP-Chip data	4.83	□□□□□ -1.64	not detected
SIR1	YKR101W	STE12	P13574	688 aa		4.83	□□□□□ -1.64
SIR1	YKR101W	EST1	P17214	699 aa	Predicted RBP	4.83	□□□□□ -1.64
SIR1	YKR101W	KGD1	P20967	1014 aa	Known RBP	4.83	□□□□□ -1.64
SIR1	YKR101W	VPH1	P32563	840 aa	Known RBP	4.83	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 10.4 ms