RNA–Protein interactions for RNA: YKL145W

RPT1, Transcript of ATPase of the 19S regulatory particle of the 26S proteasome, yeast

Gene RPT1, Length 1,404 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPT1	YKL145W	RTK1	Q12100	620 aa	Predicted RBP	5.77	□□□□□ -1.49
RPT1	YKL145W	SGT2	Q12118	346 aa	Known RBP	5.77	□□□□□ -1.49
RPT1	YKL145W	HAL9	Q12180	1030 aa		5.77	□□□□□ -1.49
RPT1	YKL145W	PUS1	Q12211	544 aa	Known RBP	5.77	□□□□□ -1.49
RPT1	YKL145W	PHO5	P00635	467 aa		5.76	□□□□□ -1.49
RPT1	YKL145W	RPS17A	P02407	136 aa	Known RBP	5.76	□□□□□ -1.49
RPT1	YKL145W	GAL10	P04397	699 aa		5.76	□□□□□ -1.49
RPT1	YKL145W	RPS17B	P14127	136 aa	Known RBP	5.76	□□□□□ -1.49
RPT1	YKL145W	FUR1	P18562	216 aa	Known RBP	5.76	□□□□□ -1.49
RPT1	YKL145W	CKI1	P20485	582 aa		5.76	□□□□□ -1.49
RPT1	YKL145W	PGS1	P25578	521 aa		5.76	□□□□□ -1.49
RPT1	YKL145W	FUB1	P25659	250 aa		5.76	□□□□□ -1.49
RPT1	YKL145W	TYE7	P33122	291 aa	Predicted RBP	5.76	□□□□□ -1.49
RPT1	YKL145W	CSE2	P33308	149 aa		5.76	□□□□□ -1.49
RPT1	YKL145W	YBR138C	P38277	524 aa		5.76	□□□□□ -1.49
RPT1	YKL145W	YHR054C	P38780	354 aa		5.76	□□□□□ -1.49
RPT1	YKL145W	SSP120	P39931	234 aa	Known RBP	5.76	□□□□□ -1.49
RPT1	YKL145W	YER010C	P40011	234 aa		5.76	□□□□□ -1.49
RPT1	YKL145W	TPA1	P40032	644 aa	Known RBP	5.76	□□□□□ -1.49
RPT1	YKL145W	YTA12	P40341	825 aa		5.76	□□□□□ -1.49
RPT1	YKL145W	MAD2	P40958	196 aa		5.76	□□□□□ -1.49
RPT1	YKL145W	ZAP1	P47043	880 aa		5.76	□□□□□ -1.49
RPT1	YKL145W	STB4	P50104	949 aa		5.76	□□□□□ -1.49
RPT1	YKL145W	ALT2	P52892	507 aa		5.76	□□□□□ -1.49
RPT1	YKL145W	SCW11	P53189	542 aa		5.76	□□□□□ -1.49
RPT1	YKL145W	LEE1	Q02799	301 aa	Known RBP	5.76	□□□□□ -1.49
RPT1	YKL145W	VPS60	Q03390	229 aa		5.76	□□□□□ -1.49
RPT1	YKL145W	YMR114C	Q04471	368 aa	Known RBP	5.76	□□□□□ -1.49
RPT1	YKL145W	CDD1	Q06549	142 aa		5.76	□□□□□ -1.49
RPT1	YKL145W	HEM1	P09950	548 aa	Predicted RBP	5.75	□□□□□ -1.49
RPT1	YKL145W	ACO1	P19414	778 aa	Known RBP RIP-Chip data	5.75	□□□□□ -1.49	not detected
RPT1	YKL145W	PAP1	P29468	568 aa	Known RBP	5.75	□□□□□ -1.49
RPT1	YKL145W	SEC21	P32074	935 aa	Known RBP	5.75	□□□□□ -1.49
RPT1	YKL145W	EFB1	P32471	206 aa	Known RBP	5.75	□□□□□ -1.49
RPT1	YKL145W	GYP6	P32806	458 aa		5.75	□□□□□ -1.49
RPT1	YKL145W	NPL6	P32832	435 aa		5.75	□□□□□ -1.49
RPT1	YKL145W	HEL1	P36113	551 aa		5.75	□□□□□ -1.49
RPT1	YKL145W	AGP2	P38090	596 aa		5.75	□□□□□ -1.49
RPT1	YKL145W	POA1	P38218	177 aa		5.75	□□□□□ -1.49
RPT1	YKL145W	CBR1	P38626	284 aa	Known RBP	5.75	□□□□□ -1.49
RPT1	YKL145W	YHL026C	P38740	315 aa		5.75	□□□□□ -1.49
RPT1	YKL145W	SMF1	P38925	575 aa		5.75	□□□□□ -1.49
RPT1	YKL145W	KAP114	P53067	1004 aa		5.75	□□□□□ -1.49
RPT1	YKL145W	JJJ1	P53863	590 aa		5.75	□□□□□ -1.49
RPT1	YKL145W	GPD1	Q00055	391 aa	Known RBP	5.75	□□□□□ -1.49
RPT1	YKL145W	NSE5	Q03718	556 aa		5.75	□□□□□ -1.49
RPT1	YKL145W	GYL1	Q04322	720 aa		5.75	□□□□□ -1.49
RPT1	YKL145W	PSR1	Q07800	427 aa		5.75	□□□□□ -1.49
RPT1	YKL145W	SFI1	Q12369	946 aa		5.75	□□□□□ -1.49
RPT1	YKL145W	CTF3	Q12748	733 aa		5.75	□□□□□ -1.49
RPT1	YKL145W	SIR1	P21691	654 aa		5.74	□□□□□ -1.49
RPT1	YKL145W	CAD1	P24813	409 aa	Known RBP	5.74	□□□□□ -1.49
RPT1	YKL145W	RSA4	P25382	515 aa	Known RBP	5.74	□□□□□ -1.49
RPT1	YKL145W	RPD3	P32561	433 aa		5.74	□□□□□ -1.49
RPT1	YKL145W	PXA2	P34230	853 aa		5.74	□□□□□ -1.49
RPT1	YKL145W	ALG14	P38242	237 aa		5.74	□□□□□ -1.49
RPT1	YKL145W	HIS2	P38635	335 aa		5.74	□□□□□ -1.49
RPT1	YKL145W	YLF2	P38746	405 aa		5.74	□□□□□ -1.49
RPT1	YKL145W	PHO86	P46956	311 aa		5.74	□□□□□ -1.49
RPT1	YKL145W	SAP4	P53036	818 aa		5.74	□□□□□ -1.49
RPT1	YKL145W	RAI1	P53063	387 aa	Known RBP	5.74	□□□□□ -1.49
RPT1	YKL145W	YGR111W	P53265	400 aa		5.74	□□□□□ -1.49
RPT1	YKL145W	BTN2	P53286	410 aa		5.74	□□□□□ -1.49
RPT1	YKL145W	YPL034W	Q03083	165 aa		5.74	□□□□□ -1.49
RPT1	YKL145W	RRB1	Q04225	511 aa	Known RBP	5.74	□□□□□ -1.49
RPT1	YKL145W	YDR222W	Q04925	415 aa		5.74	□□□□□ -1.49
RPT1	YKL145W	YDR278C	Q05612	105 aa		5.74	□□□□□ -1.49
RPT1	YKL145W	YPS7	Q06325	596 aa		5.74	□□□□□ -1.49
RPT1	YKL145W	ECM30	Q06673	1274 aa		5.74	□□□□□ -1.49
RPT1	YKL145W	DNL4	Q08387	944 aa	Predicted RBP	5.74	□□□□□ -1.49
RPT1	YKL145W	DIN7	Q12086	430 aa		5.74	□□□□□ -1.49
RPT1	YKL145W	GPM1	P00950	247 aa	Known RBP	5.74	□□□□□ -1.49
RPT1	YKL145W	RPS3	P05750	240 aa	Known RBP	5.74	□□□□□ -1.49
RPT1	YKL145W	FUM1	P08417	488 aa	Known RBP	5.74	□□□□□ -1.49
RPT1	YKL145W	PET111	P08468	800 aa		5.74	□□□□□ -1.49
RPT1	YKL145W	CLB4	P24871	460 aa		5.74	□□□□□ -1.49
RPT1	YKL145W	IMG2	P25642	146 aa	Predicted RBP	5.74	□□□□□ -1.49
RPT1	YKL145W	DGR2	P32330	852 aa		5.74	□□□□□ -1.49
RPT1	YKL145W	BUD2	P33314	1104 aa		5.74	□□□□□ -1.49
RPT1	YKL145W	CEM1	P39525	442 aa		5.74	□□□□□ -1.49
RPT1	YKL145W	YEL075C	P39972	122 aa		5.74	□□□□□ -1.49
RPT1	YKL145W	BUD16	P39988	312 aa		5.74	□□□□□ -1.49
RPT1	YKL145W	RMD8	P43620	662 aa		5.74	□□□□□ -1.49
RPT1	YKL145W	BRO1	P48582	844 aa		5.74	□□□□□ -1.49
RPT1	YKL145W	PRP31	P49704	494 aa	Predicted RBP	5.74	□□□□□ -1.49
RPT1	YKL145W	MNT2	P53059	558 aa		5.74	□□□□□ -1.49
RPT1	YKL145W	YGR016W	P53209	190 aa		5.74	□□□□□ -1.49
RPT1	YKL145W	CWC22	P53333	577 aa	Known RBP	5.74	□□□□□ -1.49
RPT1	YKL145W	EAR1	Q03212	550 aa		5.74	□□□□□ -1.49
RPT1	YKL145W	RCR2	Q03446	210 aa	Known RBP	5.74	□□□□□ -1.49
RPT1	YKL145W	DBP10	Q12389	995 aa	Known RBP	5.74	□□□□□ -1.49
RPT1	YKL145W	LAA1	P39526	2014 aa		5.73	□□□□□ -1.49
RPT1	YKL145W	CHS1	P08004	1131 aa		5.73	□□□□□ -1.49
RPT1	YKL145W	SAM35	P14693	329 aa		5.73	□□□□□ -1.49
RPT1	YKL145W	KAR3	P17119	729 aa		5.73	□□□□□ -1.49
RPT1	YKL145W	SAT4	P25333	603 aa	Known RBP	5.73	□□□□□ -1.49
RPT1	YKL145W	DBF4	P32325	704 aa		5.73	□□□□□ -1.49
RPT1	YKL145W	VPH1	P32563	840 aa	Known RBP	5.73	□□□□□ -1.49
RPT1	YKL145W	SET3	P36124	751 aa		5.73	□□□□□ -1.49
RPT1	YKL145W	RRT2	P38332	387 aa		5.73	□□□□□ -1.49

Retrieved 100 of 5,963 RNA–protein pairs in 27.1 ms