RNA–Protein interactions for RNA: YKL057C

NUP120, Transcript of Subunit of the Nup84p subcomplex of the nuclear pore complex (NPC), yeastyeast

Gene NUP120, Length 3,114 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP120YKL057C CAF130P53280 1122 aaPredicted RBP2.34□□□□□ -2.04
NUP120YKL057C OGG1P53397 376 aaPredicted RBP2.34□□□□□ -2.04
NUP120YKL057C CAR1P00812 333 aaKnown RBP2.33□□□□□ -2.04
NUP120YKL057C MF(ALPHA)1P01149 165 aa2.33□□□□□ -2.04
NUP120YKL057C STE4P18851 423 aa2.33□□□□□ -2.04
NUP120YKL057C PTC6P25646 442 aa2.33□□□□□ -2.04
NUP120YKL057C MCM4P30665 933 aaKnown RBP2.33□□□□□ -2.04
NUP120YKL057C APE3P37302 537 aaKnown RBP2.33□□□□□ -2.04
NUP120YKL057C IFA38P38286 347 aa2.33□□□□□ -2.04
NUP120YKL057C IME4P41833 600 aa2.33□□□□□ -2.04
NUP120YKL057C SSU1P41930 458 aa2.33□□□□□ -2.04
NUP120YKL057C BOP3P53958 396 aa2.33□□□□□ -2.04
NUP120YKL057C SEG1Q04279 960 aa2.33□□□□□ -2.04
NUP120YKL057C UTP21Q06078 939 aaPredicted RBP2.33□□□□□ -2.04
NUP120YKL057C SKG3Q06315 1026 aa2.33□□□□□ -2.04
NUP120YKL057C MRI1Q06489 411 aaKnown RBP2.33□□□□□ -2.04
NUP120YKL057C BSP1Q06604 576 aa2.33□□□□□ -2.04
NUP120YKL057C SNA4Q07549 140 aa2.33□□□□□ -2.04
NUP120YKL057C SSP2Q08646 371 aa2.33□□□□□ -2.04
NUP120YKL057C RIM20Q12033 661 aa2.33□□□□□ -2.04
NUP120YKL057C PCD1Q12524 340 aa2.33□□□□□ -2.04
NUP120YKL057C PDE2P06776 526 aa2.33□□□□□ -2.04
NUP120YKL057C ERG8P24521 451 aa2.33□□□□□ -2.04
NUP120YKL057C COQ3P27680 312 aa2.33□□□□□ -2.04
NUP120YKL057C SEF1P34228 1148 aa2.33□□□□□ -2.04
NUP120YKL057C MAD2P40958 196 aa2.33□□□□□ -2.04
NUP120YKL057C CCT7P42943 550 aaKnown RBP2.33□□□□□ -2.04
NUP120YKL057C YPT11P48559 417 aa2.33□□□□□ -2.04
NUP120YKL057C GIS1Q03833 894 aa2.33□□□□□ -2.04
NUP120YKL057C GLO2Q05584 274 aa2.33□□□□□ -2.04
NUP120YKL057C LEU9Q12166 604 aaKnown RBP2.33□□□□□ -2.04
NUP120YKL057C YBR138CP38277 524 aa2.33□□□□□ -2.04
NUP120YKL057C GRC3Q07845 632 aa2.33□□□□□ -2.04
NUP120YKL057C PFA4Q12006 378 aa2.33□□□□□ -2.04
NUP120YKL057C DIN7Q12086 430 aa2.33□□□□□ -2.04
NUP120YKL057C ISA2Q12425 185 aa2.33□□□□□ -2.04
NUP120YKL057C HSH49Q99181 213 aaPredicted RBP2.33□□□□□ -2.04
NUP120YKL057C EDE1P34216 1381 aa2.32□□□□□ -2.04
NUP120YKL057C FOB1O13329 566 aa2.32□□□□□ -2.04
NUP120YKL057C HNM1P19807 563 aa2.32□□□□□ -2.04
NUP120YKL057C PRO3P32263 286 aaKnown RBP2.32□□□□□ -2.04
NUP120YKL057C ULP2P40537 1034 aaPredicted RBP2.32□□□□□ -2.04
NUP120YKL057C IZH1Q03419 316 aa2.32□□□□□ -2.04
NUP120YKL057C GCN4P03069 281 aa2.32□□□□□ -2.04
NUP120YKL057C RED1P14291 827 aa2.32□□□□□ -2.04
NUP120YKL057C CDS1P38221 457 aa2.32□□□□□ -2.04
NUP120YKL057C YJL068CP40363 299 aa2.32□□□□□ -2.04
NUP120YKL057C CUL3P53202 744 aa2.32□□□□□ -2.04
NUP120YKL057C RGC1Q06108 1083 aaKnown RBP2.32□□□□□ -2.04
NUP120YKL057C YDL218WQ07629 317 aa2.32□□□□□ -2.04
NUP120YKL057C NRT1Q08485 598 aa2.32□□□□□ -2.04
NUP120YKL057C CRC1Q12289 327 aa2.32□□□□□ -2.04
NUP120YKL057C HOM3P10869 527 aa2.31□□□□□ -2.04
NUP120YKL057C MRP7P12687 371 aa2.31□□□□□ -2.04
NUP120YKL057C RPL3P14126 387 aaKnown RBP2.31□□□□□ -2.04
NUP120YKL057C CHS7P38843 316 aa2.31□□□□□ -2.04
NUP120YKL057C ERG5P54781 538 aa2.31□□□□□ -2.04
NUP120YKL057C MDM1Q01846 1127 aa2.31□□□□□ -2.04
NUP120YKL057C HMO1Q03973 246 aaKnown RBP2.31□□□□□ -2.04
NUP120YKL057C YDL057WQ07379 328 aa2.31□□□□□ -2.04
NUP120YKL057C GPR1Q12361 961 aa2.31□□□□□ -2.04
NUP120YKL057C MDM10P18409 493 aa2.31□□□□□ -2.04
NUP120YKL057C MGR1P25573 417 aa2.31□□□□□ -2.04
NUP120YKL057C SEC24P40482 926 aaKnown RBP2.31□□□□□ -2.04
NUP120YKL057C SGF73P53165 657 aa2.31□□□□□ -2.04
NUP120YKL057C SMM1P53720 384 aaKnown RBP2.31□□□□□ -2.04
NUP120YKL057C MRPL19P53875 158 aa2.31□□□□□ -2.04
NUP120YKL057C YMR010WQ03687 405 aa2.31□□□□□ -2.04
NUP120YKL057C USA1Q03714 838 aa2.31□□□□□ -2.04
NUP120YKL057C ATG23Q06671 453 aa2.31□□□□□ -2.04
NUP120YKL057C YIH1P25637 258 aa2.31□□□□□ -2.04
NUP120YKL057C CMK1P27466 446 aaKnown RBP2.31□□□□□ -2.04
NUP120YKL057C UBP13P38187 747 aa2.31□□□□□ -2.04
NUP120YKL057C MUM2P38236 366 aa2.31□□□□□ -2.04
NUP120YKL057C YFL067WP43537 175 aa2.31□□□□□ -2.04
NUP120YKL057C MDV1P47025 714 aa2.31□□□□□ -2.04
NUP120YKL057C YGR126WP53274 230 aa2.31□□□□□ -2.04
NUP120YKL057C YMR160WQ03823 816 aa2.31□□□□□ -2.04
NUP120YKL057C COG4Q06096 861 aa2.31□□□□□ -2.04
NUP120YKL057C YPL191CQ08930 360 aa2.31□□□□□ -2.04
NUP120YKL057C PCL8Q08966 492 aa2.31□□□□□ -2.04
NUP120YKL057C FMP40Q08968 688 aaPredicted RBP2.31□□□□□ -2.04
NUP120YKL057C YBR255C-AQ3E776 120 aa2.31□□□□□ -2.04
NUP120YKL057C CLN1P20437 546 aa2.3□□□□□ -2.04
NUP120YKL057C SAN1P22470 610 aa2.3□□□□□ -2.04
NUP120YKL057C BOS1P25385 244 aa2.3□□□□□ -2.04
NUP120YKL057C MUD2P36084 527 aaKnown RBP2.3□□□□□ -2.04
NUP120YKL057C YFR020WP43600 232 aa2.3□□□□□ -2.04
NUP120YKL057C NPA3P47122 385 aa2.3□□□□□ -2.04
NUP120YKL057C BPL1P48445 690 aaPredicted RBP2.3□□□□□ -2.04
NUP120YKL057C HEL2Q05580 639 aaKnown RBP2.3□□□□□ -2.04
NUP120YKL057C FUM1P08417 488 aaKnown RBP2.3□□□□□ -2.04
NUP120YKL057C AXL2P38928 823 aa2.3□□□□□ -2.04
NUP120YKL057C ELP2P42935 788 aa2.3□□□□□ -2.04
NUP120YKL057C MRK1P50873 501 aa2.3□□□□□ -2.04
NUP120YKL057C YGL117WP53133 265 aa2.3□□□□□ -2.04
NUP120YKL057C DUO1P53168 247 aaKnown RBP2.3□□□□□ -2.04
NUP120YKL057C MFB1Q04922 465 aa2.3□□□□□ -2.04
NUP120YKL057C REX4Q08237 289 aa2.3□□□□□ -2.04
NUP120YKL057C HER1Q12276 1246 aa2.3□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 16 ms