RNA–Protein interactions for RNA: YHR041C

SRB2, Transcript of Subunit of the RNA polymerase II mediator complex, yeast

Gene SRB2, Length 633 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SRB2	YHR041C	PEP8	P40335	379 aa		13.21	□□□□□ -0.29
SRB2	YHR041C	SIP4	P46954	829 aa		13.21	□□□□□ -0.29
SRB2	YHR041C	DAN4	P47179	1161 aa		13.21	□□□□□ -0.29
SRB2	YHR041C	COG7	P53195	279 aa		13.21	□□□□□ -0.29
SRB2	YHR041C	NOP15	P53927	220 aa	Predicted RBP	13.21	□□□□□ -0.29
SRB2	YHR041C	UBX4	P54730	416 aa		13.21	□□□□□ -0.29
SRB2	YHR041C	SYT1	Q06836	1226 aa		13.21	□□□□□ -0.29
SRB2	YHR041C	MRH1	Q12117	320 aa	Predicted RBP	13.21	□□□□□ -0.29
SRB2	YHR041C	MSH2	P25847	964 aa		13.2	□□□□□ -0.3
SRB2	YHR041C	GUT2	P32191	649 aa		13.2	□□□□□ -0.3
SRB2	YHR041C	DCW1	P36091	449 aa		13.2	□□□□□ -0.3
SRB2	YHR041C	SET3	P36124	751 aa		13.2	□□□□□ -0.3
SRB2	YHR041C	YGL140C	P53120	1219 aa		13.2	□□□□□ -0.3
SRB2	YHR041C	PET117	Q02771	107 aa		13.2	□□□□□ -0.3
SRB2	YHR041C	FAR8	Q05040	523 aa		13.2	□□□□□ -0.3
SRB2	YHR041C	YPR084W	Q06821	456 aa		13.2	□□□□□ -0.3
SRB2	YHR041C	RUD3	Q12234	484 aa	Known RBP	13.2	□□□□□ -0.3
SRB2	YHR041C	MSH1	P25846	959 aa		13.19	□□□□□ -0.3
SRB2	YHR041C	YSC84	P32793	468 aa		13.19	□□□□□ -0.3
SRB2	YHR041C	LDB7	P38210	180 aa		13.19	□□□□□ -0.3
SRB2	YHR041C	YDR089W	P38966	869 aa		13.19	□□□□□ -0.3
SRB2	YHR041C	PEX8	P53248	589 aa		13.19	□□□□□ -0.3
SRB2	YHR041C	LSC1	P53598	329 aa	Known RBP	13.19	□□□□□ -0.3
SRB2	YHR041C	UTP13	Q05946	817 aa	Known RBP	13.19	□□□□□ -0.3
SRB2	YHR041C	NCA2	Q12374	616 aa		13.19	□□□□□ -0.3
SRB2	YHR041C	EMC1	P25574	760 aa		13.18	□□□□□ -0.3
SRB2	YHR041C	GUT1	P32190	709 aa		13.18	□□□□□ -0.3
SRB2	YHR041C	SFP1	P32432	683 aa		13.18	□□□□□ -0.3
SRB2	YHR041C	RML2	P32611	393 aa		13.18	□□□□□ -0.3
SRB2	YHR041C	YBR259W	P38338	688 aa		13.18	□□□□□ -0.3
SRB2	YHR041C	GDH3	P39708	457 aa		13.18	□□□□□ -0.3
SRB2	YHR041C	HOS4	P40480	1083 aa		13.18	□□□□□ -0.3
SRB2	YHR041C	GTS1	P40956	396 aa		13.18	□□□□□ -0.3
SRB2	YHR041C	SPC105	P53148	917 aa		13.18	□□□□□ -0.3
SRB2	YHR041C	YDR131C	Q03899	556 aa		13.18	□□□□□ -0.3
SRB2	YHR041C	APC9	Q12107	265 aa		13.18	□□□□□ -0.3
SRB2	YHR041C	YOR338W	Q99326	363 aa		13.18	□□□□□ -0.3
SRB2	YHR041C	RAD3	P06839	778 aa		13.17	□□□□□ -0.3
SRB2	YHR041C	AAD3	P25612	363 aa		13.17	□□□□□ -0.3
SRB2	YHR041C	GCD11	P32481	527 aa	Known RBP	13.17	□□□□□ -0.3
SRB2	YHR041C	CTF13	P35203	478 aa		13.17	□□□□□ -0.3
SRB2	YHR041C	CIN4	P39110	191 aa		13.17	□□□□□ -0.3
SRB2	YHR041C	ACO2	P39533	789 aa		13.17	□□□□□ -0.3
SRB2	YHR041C	ALG8	P40351	577 aa		13.17	□□□□□ -0.3
SRB2	YHR041C	NBP35	P52920	328 aa		13.17	□□□□□ -0.3
SRB2	YHR041C	EFM6	P53970	246 aa		13.17	□□□□□ -0.3
SRB2	YHR041C	SMA1	Q02651	245 aa		13.17	□□□□□ -0.3
SRB2	YHR041C	NUS1	Q12063	375 aa		13.17	□□□□□ -0.3
SRB2	YHR041C	GNT1	Q12096	491 aa		13.17	□□□□□ -0.3
SRB2	YHR041C	MNN1	P39106	762 aa		13.16	□□□□□ -0.3
SRB2	YHR041C	YJL206C	P39529	758 aa		13.16	□□□□□ -0.3
SRB2	YHR041C	SSP120	P39931	234 aa	Known RBP	13.16	□□□□□ -0.3
SRB2	YHR041C	CSN9	Q03981	162 aa		13.16	□□□□□ -0.3
SRB2	YHR041C	FRT1	Q99332	602 aa		13.16	□□□□□ -0.3
SRB2	YHR041C	HRR25	P29295	494 aa	Known RBP	13.15	□□□□□ -0.3
SRB2	YHR041C	YBR062C	P38239	180 aa		13.15	□□□□□ -0.3
SRB2	YHR041C	TAE1	P38340	232 aa		13.15	□□□□□ -0.3
SRB2	YHR041C	PHO89	P38361	574 aa		13.15	□□□□□ -0.3
SRB2	YHR041C	WSC4	P38739	605 aa		13.15	□□□□□ -0.3
SRB2	YHR041C	PAN2	P53010	1115 aa	Predicted RBP	13.15	□□□□□ -0.3
SRB2	YHR041C	YMR178W	Q03219	274 aa	Known RBP	13.15	□□□□□ -0.3
SRB2	YHR041C	GSF2	Q04697	403 aa	Known RBP	13.15	□□□□□ -0.3
SRB2	YHR041C	HEL2	Q05580	639 aa	Known RBP	13.15	□□□□□ -0.3
SRB2	YHR041C	CRN1	Q06440	651 aa		13.15	□□□□□ -0.3
SRB2	YHR041C	OMS1	Q06668	471 aa		13.15	□□□□□ -0.3
SRB2	YHR041C	SMF3	Q12078	473 aa	Predicted RBP	13.15	□□□□□ -0.3
SRB2	YHR041C	CHS5	Q12114	671 aa	Known RBP	13.15	□□□□□ -0.3
SRB2	YHR041C	UBX3	Q12229	455 aa		13.15	□□□□□ -0.3
SRB2	YHR041C	KCS1	Q12494	1050 aa		13.15	□□□□□ -0.3
SRB2	YHR041C	RGS2	Q99188	309 aa		13.15	□□□□□ -0.3
SRB2	YHR041C	GCY1	P14065	312 aa	Known RBP RIP-Chip data	13.14	□□□□□ -0.31	not detected
SRB2	YHR041C	RRP14	P36080	434 aa	Known RBP	13.14	□□□□□ -0.31
SRB2	YHR041C	SRP72	P38688	640 aa	Known RBP	13.14	□□□□□ -0.31
SRB2	YHR041C	ART5	P53244	586 aa	Known RBP	13.14	□□□□□ -0.31
SRB2	YHR041C	TRM12	Q04235	462 aa		13.14	□□□□□ -0.31
SRB2	YHR041C	ATG10	Q07879	167 aa		13.14	□□□□□ -0.31
SRB2	YHR041C	HRK1	Q08732	759 aa	Known RBP	13.14	□□□□□ -0.31
SRB2	YHR041C	STB3	Q12427	513 aa		13.14	□□□□□ -0.31
SRB2	YHR041C	Q0182	Q9ZZW1	134 aa		13.14	□□□□□ -0.31
SRB2	YHR041C	FMP27	Q06179	2628 aa		13.14	□□□□□ -0.31
SRB2	YHR041C	PHO5	P00635	467 aa		13.13	□□□□□ -0.31
SRB2	YHR041C	SEC53	P07283	254 aa	Known RBP	13.13	□□□□□ -0.31
SRB2	YHR041C	UBA1	P22515	1024 aa	Known RBP	13.13	□□□□□ -0.31
SRB2	YHR041C	TCD2	P36101	447 aa	Known RBP	13.13	□□□□□ -0.31
SRB2	YHR041C	VRP1	P37370	817 aa		13.13	□□□□□ -0.31
SRB2	YHR041C	GIP4	P39732	760 aa		13.13	□□□□□ -0.31
SRB2	YHR041C	TIS11	P47977	285 aa		13.13	□□□□□ -0.31
SRB2	YHR041C	TOM20	P35180	183 aa		13.12	□□□□□ -0.31
SRB2	YHR041C	PCL5	P38794	229 aa		13.12	□□□□□ -0.31
SRB2	YHR041C	LRP1	P38801	184 aa	Known RBP	13.12	□□□□□ -0.31
SRB2	YHR041C	YJR061W	P40355	935 aa		13.12	□□□□□ -0.31
SRB2	YHR041C	IRR1	P40541	1150 aa		13.12	□□□□□ -0.31
SRB2	YHR041C	GAT1	P43574	510 aa		13.12	□□□□□ -0.31
SRB2	YHR041C	LIA1	P47120	325 aa	Known RBP	13.12	□□□□□ -0.31
SRB2	YHR041C	SNO2	P53823	222 aa		13.12	□□□□□ -0.31
SRB2	YHR041C	RNT1	Q02555	471 aa		13.12	□□□□□ -0.31
SRB2	YHR041C	PPN1	Q04119	674 aa		13.12	□□□□□ -0.31
SRB2	YHR041C	YDR109C	Q04585	715 aa		13.12	□□□□□ -0.31
SRB2	YHR041C	YPL247C	Q12523	523 aa		13.12	□□□□□ -0.31
SRB2	YHR041C	NAG1	Q8TGN9	163 aa		13.12	□□□□□ -0.31

Retrieved 100 of 5,963 RNA–protein pairs in 32.3 ms