RNA–Protein interactions for RNA: YGR133W

PEX4, Transcript of Peroxisomal ubiquitin conjugating enzyme, yeastyeast

Gene PEX4, Length 552 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEX4YGR133W CFD1P40558 293 aa2.54□□□□□ -2
PEX4YGR133W PXA1P41909 870 aa2.54□□□□□ -2
PEX4YGR133W CAF16P43569 289 aa2.54□□□□□ -2
PEX4YGR133W TRS85P46944 698 aa2.54□□□□□ -2
PEX4YGR133W BOP3P53958 396 aa2.54□□□□□ -2
PEX4YGR133W VPS64Q03944 604 aa2.54□□□□□ -2
PEX4YGR133W POB3Q04636 552 aaKnown RBP2.54□□□□□ -2
PEX4YGR133W NOP6Q07623 225 aaKnown RBP2.54□□□□□ -2
PEX4YGR133W SDH5Q08230 162 aa2.54□□□□□ -2
PEX4YGR133W VHS3Q08438 674 aa2.54□□□□□ -2
PEX4YGR133W APL5Q08951 932 aaKnown RBP2.54□□□□□ -2
PEX4YGR133W NUR1Q12066 484 aa2.54□□□□□ -2
PEX4YGR133W CDC9P04819 755 aa2.53□□□□□ -2
PEX4YGR133W CDC37P06101 506 aaKnown RBP2.53□□□□□ -2
PEX4YGR133W PMR1P13586 950 aa2.53□□□□□ -2
PEX4YGR133W FRS1P15624 595 aaKnown RBP2.53□□□□□ -2
PEX4YGR133W GAL11P19659 1081 aa2.53□□□□□ -2
PEX4YGR133W CBP3P21560 335 aa2.53□□□□□ -2
PEX4YGR133W MRPS28P21771 286 aa2.53□□□□□ -2
PEX4YGR133W RAD51P25454 400 aa2.53□□□□□ -2
PEX4YGR133W BMH1P29311 267 aaKnown RBP2.53□□□□□ -2
PEX4YGR133W SKI2P35207 1287 aaKnown RBP RIP-Chip data2.53□□□□□ -2not detected
PEX4YGR133W YET1P35723 206 aa2.53□□□□□ -2
PEX4YGR133W PBP2P38151 413 aaKnown RBP RIP-Chip data2.53□□□□□ -2not detected
PEX4YGR133W SLX1P38324 304 aa2.53□□□□□ -2
PEX4YGR133W CTM1P38818 585 aa2.53□□□□□ -2
PEX4YGR133W YHR131CP38835 850 aa2.53□□□□□ -2
PEX4YGR133W SMF1P38925 575 aa2.53□□□□□ -2
PEX4YGR133W NAB3P38996 802 aaKnown RBP RIP-Chip data2.53□□□□□ -2not detected
PEX4YGR133W SHQ1P40486 507 aaPredicted RBP2.53□□□□□ -2
PEX4YGR133W EFM4P40516 257 aa2.53□□□□□ -2
PEX4YGR133W YIR016WP40572 265 aa2.53□□□□□ -2
PEX4YGR133W ILM1P47155 203 aa2.53□□□□□ -2
PEX4YGR133W CUE3P53137 624 aaKnown RBP2.53□□□□□ -2
PEX4YGR133W BUD17P53727 317 aa2.53□□□□□ -2
PEX4YGR133W UBP16Q02863 499 aa2.53□□□□□ -2
PEX4YGR133W SPO19Q03029 223 aa2.53□□□□□ -2
PEX4YGR133W YLR287CQ05881 355 aa2.53□□□□□ -2
PEX4YGR133W RRP6Q12149 733 aaKnown RBP2.53□□□□□ -2
PEX4YGR133W NOP56Q12460 504 aaKnown RBP RIP-Chip data2.53□□□□□ -2not detected
PEX4YGR133W SAC3P46674 1301 aa2.52□□□□□ -2.01
PEX4YGR133W KRS1P15180 591 aaKnown RBP2.52□□□□□ -2.01
PEX4YGR133W STI1P15705 589 aaKnown RBP RIP-Chip data2.52□□□□□ -2.01not detected
PEX4YGR133W SPO12P17123 173 aa2.52□□□□□ -2.01
PEX4YGR133W CKI1P20485 582 aa2.52□□□□□ -2.01
PEX4YGR133W RAD57P25301 460 aa2.52□□□□□ -2.01
PEX4YGR133W CDC10P25342 322 aaKnown RBP2.52□□□□□ -2.01
PEX4YGR133W YCR043CP25361 127 aa2.52□□□□□ -2.01
PEX4YGR133W PDB1P32473 366 aaKnown RBP2.52□□□□□ -2.01
PEX4YGR133W YME2P32843 850 aa2.52□□□□□ -2.01
PEX4YGR133W RAD5P32849 1169 aaPredicted RBP2.52□□□□□ -2.01
PEX4YGR133W BMH2P34730 273 aaKnown RBP2.52□□□□□ -2.01
PEX4YGR133W STV1P37296 890 aa2.52□□□□□ -2.01
PEX4YGR133W ARC40P38328 384 aaKnown RBP2.52□□□□□ -2.01
PEX4YGR133W ERG7P38604 731 aa2.52□□□□□ -2.01
PEX4YGR133W GND1P38720 489 aaKnown RBP2.52□□□□□ -2.01
PEX4YGR133W CRG1P38892 291 aaRIP-Chip data2.52□□□□□ -2.01not detected
PEX4YGR133W GDH3P39708 457 aa2.52□□□□□ -2.01
PEX4YGR133W MRX1P40050 688 aa2.52□□□□□ -2.01
PEX4YGR133W YMR147WP40218 223 aaKnown RBP2.52□□□□□ -2.01
PEX4YGR133W MDV1P47025 714 aa2.52□□□□□ -2.01
PEX4YGR133W YJR142WP47173 342 aa2.52□□□□□ -2.01
PEX4YGR133W YPL071CQ02864 156 aa2.52□□□□□ -2.01
PEX4YGR133W HOT1Q03213 719 aa2.52□□□□□ -2.01
PEX4YGR133W RCR2Q03446 210 aaKnown RBP2.52□□□□□ -2.01
PEX4YGR133W EFR3Q03653 782 aaKnown RBP2.52□□□□□ -2.01
PEX4YGR133W VBA4Q04602 768 aaKnown RBP2.52□□□□□ -2.01
PEX4YGR133W SPN1Q06505 410 aaPredicted RBP2.52□□□□□ -2.01
PEX4YGR133W GRS2Q06817 618 aa2.52□□□□□ -2.01
PEX4YGR133W YPL216WQ08964 1102 aa2.52□□□□□ -2.01
PEX4YGR133W CDC53Q12018 815 aaKnown RBP2.52□□□□□ -2.01
PEX4YGR133W ICL2Q12031 575 aa2.52□□□□□ -2.01
PEX4YGR133W DCS2Q12123 353 aa2.52□□□□□ -2.01
PEX4YGR133W GET3Q12154 354 aaKnown RBP2.52□□□□□ -2.01
PEX4YGR133W SNU66Q12420 587 aaPredicted RBP2.52□□□□□ -2.01
PEX4YGR133W RMP1Q12530 201 aa2.52□□□□□ -2.01
PEX4YGR133W NBL1Q3E7Y6 73 aa2.52□□□□□ -2.01
PEX4YGR133W ADR1P07248 1323 aa2.51□□□□□ -2.01
PEX4YGR133W RPB2P08518 1224 aaKnown RBP2.51□□□□□ -2.01
PEX4YGR133W KAR3P17119 729 aa2.51□□□□□ -2.01
PEX4YGR133W SEC18P18759 758 aaKnown RBP2.51□□□□□ -2.01
PEX4YGR133W RNR3P21672 869 aaKnown RBP2.51□□□□□ -2.01
PEX4YGR133W ARG1P22768 420 aa2.51□□□□□ -2.01
PEX4YGR133W AIM17P23180 465 aaKnown RBP2.51□□□□□ -2.01
PEX4YGR133W MCM3P24279 971 aaKnown RBP2.51□□□□□ -2.01
PEX4YGR133W CLB4P24871 460 aa2.51□□□□□ -2.01
PEX4YGR133W SWI4P25302 1093 aaKnown RBP2.51□□□□□ -2.01
PEX4YGR133W BUD14P27637 709 aa2.51□□□□□ -2.01
PEX4YGR133W PAP1P29468 568 aaKnown RBP2.51□□□□□ -2.01
PEX4YGR133W DPH5P32469 300 aaPredicted RBP2.51□□□□□ -2.01
PEX4YGR133W PET127P32606 800 aa2.51□□□□□ -2.01
PEX4YGR133W LOS1P33418 1100 aaPredicted RBP2.51□□□□□ -2.01
PEX4YGR133W UIP5P36137 443 aa2.51□□□□□ -2.01
PEX4YGR133W YBR139WP38109 508 aa2.51□□□□□ -2.01
PEX4YGR133W OLA1P38219 394 aaKnown RBP2.51□□□□□ -2.01
PEX4YGR133W SPP381P38282 291 aaPredicted RBP2.51□□□□□ -2.01
PEX4YGR133W SIP3P38717 1229 aa2.51□□□□□ -2.01
PEX4YGR133W TDA3P38758 523 aa2.51□□□□□ -2.01
PEX4YGR133W VFA1P40080 203 aa2.51□□□□□ -2.01
PEX4YGR133W SAE2P46946 345 aa2.51□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 14.6 ms