RNA–Protein interactions for RNA: YDR394W

RPT3, Transcript of ATPase of the 19S regulatory particle of the 26S proteasome, yeast

Gene RPT3, Length 1,287 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPT3	YDR394W	PSF2	P40359	213 aa		6.12	□□□□□ -1.43
RPT3	YDR394W	SEC28	P40509	296 aa	Known RBP	6.12	□□□□□ -1.43
RPT3	YDR394W	MRM2	P53123	320 aa		6.12	□□□□□ -1.43
RPT3	YDR394W	YGR127W	P53275	312 aa		6.12	□□□□□ -1.43
RPT3	YDR394W	MET14	Q02196	202 aa		6.12	□□□□□ -1.43
RPT3	YDR394W	TVP15	Q03860	143 aa		6.12	□□□□□ -1.43
RPT3	YDR394W	CDC123	Q05791	360 aa		6.12	□□□□□ -1.43
RPT3	YDR394W	ESC8	Q08119	714 aa		6.12	□□□□□ -1.43
RPT3	YDR394W	DDC1	Q08949	612 aa		6.12	□□□□□ -1.43
RPT3	YDR394W	MDM20	Q12387	796 aa	Known RBP	6.12	□□□□□ -1.43
RPT3	YDR394W	YOR131C	Q12486	218 aa		6.12	□□□□□ -1.43
RPT3	YDR394W	PAB1	P04147	577 aa	Known RBP RIP-Chip data	6.11	□□□□□ -1.43	not detected
RPT3	YDR394W	HAP2	P06774	265 aa		6.11	□□□□□ -1.43
RPT3	YDR394W	REC107	P21651	314 aa		6.11	□□□□□ -1.43
RPT3	YDR394W	NPP1	P25353	742 aa		6.11	□□□□□ -1.43
RPT3	YDR394W	YCL068C	P25593	260 aa		6.11	□□□□□ -1.43
RPT3	YDR394W	BUD14	P27637	709 aa		6.11	□□□□□ -1.43
RPT3	YDR394W	MLS1	P30952	554 aa		6.11	□□□□□ -1.43
RPT3	YDR394W	NDI1	P32340	513 aa		6.11	□□□□□ -1.43
RPT3	YDR394W	PHA2	P32452	334 aa		6.11	□□□□□ -1.43
RPT3	YDR394W	CSE2	P33308	149 aa		6.11	□□□□□ -1.43
RPT3	YDR394W	CUE2	P36075	443 aa	Known RBP	6.11	□□□□□ -1.43
RPT3	YDR394W	CTP1	P38152	299 aa		6.11	□□□□□ -1.43
RPT3	YDR394W	TSC10	P38342	320 aa		6.11	□□□□□ -1.43
RPT3	YDR394W	TVP23	P38962	199 aa		6.11	□□□□□ -1.43
RPT3	YDR394W	YIL001W	P40560	513 aa		6.11	□□□□□ -1.43
RPT3	YDR394W	YFL012W	P43580	148 aa		6.11	□□□□□ -1.43
RPT3	YDR394W	UBP6	P43593	499 aa	Known RBP	6.11	□□□□□ -1.43
RPT3	YDR394W	MAD3	P47074	515 aa		6.11	□□□□□ -1.43
RPT3	YDR394W	GCV1	P48015	400 aa		6.11	□□□□□ -1.43
RPT3	YDR394W	RNR4	P49723	345 aa	Known RBP	6.11	□□□□□ -1.43
RPT3	YDR394W	TEL2	P53038	688 aa		6.11	□□□□□ -1.43
RPT3	YDR394W	USE1	P53146	245 aa		6.11	□□□□□ -1.43
RPT3	YDR394W	ERP6	P53198	216 aa		6.11	□□□□□ -1.43
RPT3	YDR394W	RLI1	Q03195	608 aa	Known RBP	6.11	□□□□□ -1.43
RPT3	YDR394W	YMR209C	Q03648	457 aa		6.11	□□□□□ -1.43
RPT3	YDR394W	HFD1	Q04458	532 aa		6.11	□□□□□ -1.43
RPT3	YDR394W	HRD3	Q05787	833 aa		6.11	□□□□□ -1.43
RPT3	YDR394W	PEX15	Q08215	383 aa		6.11	□□□□□ -1.43
RPT3	YDR394W	MED7	Q08278	222 aa		6.11	□□□□□ -1.43
RPT3	YDR394W	SEC39	Q12745	709 aa		6.11	□□□□□ -1.43
RPT3	YDR394W	HIS1	P00498	297 aa	Known RBP	6.1	□□□□□ -1.43
RPT3	YDR394W	HEM1	P09950	548 aa	Predicted RBP	6.1	□□□□□ -1.43
RPT3	YDR394W	MPH2	P0CD99	609 aa		6.1	□□□□□ -1.43
RPT3	YDR394W	SNT1	P25357	1226 aa		6.1	□□□□□ -1.43
RPT3	YDR394W	SPS22	P25380	463 aa		6.1	□□□□□ -1.43
RPT3	YDR394W	YIH1	P25637	258 aa		6.1	□□□□□ -1.43
RPT3	YDR394W	YSC84	P32793	468 aa		6.1	□□□□□ -1.43
RPT3	YDR394W	SIP2	P34164	415 aa	Known RBP	6.1	□□□□□ -1.43
RPT3	YDR394W	MRPL7	P36519	292 aa		6.1	□□□□□ -1.43
RPT3	YDR394W	PHO89	P38361	574 aa		6.1	□□□□□ -1.43
RPT3	YDR394W	AFG3	P39925	761 aa		6.1	□□□□□ -1.43
RPT3	YDR394W	YEL028W	P39989	153 aa		6.1	□□□□□ -1.43
RPT3	YDR394W	ATM1	P40416	690 aa		6.1	□□□□□ -1.43
RPT3	YDR394W	CHS6	P40955	746 aa		6.1	□□□□□ -1.43
RPT3	YDR394W	CDC1	P40986	491 aa		6.1	□□□□□ -1.43
RPT3	YDR394W	TAF1	P46677	1066 aa		6.1	□□□□□ -1.43
RPT3	YDR394W	RPS10B	P46784	105 aa	Known RBP	6.1	□□□□□ -1.43
RPT3	YDR394W	GUF1	P46943	645 aa		6.1	□□□□□ -1.43
RPT3	YDR394W	MRX6	P48564	524 aa		6.1	□□□□□ -1.43
RPT3	YDR394W	SLU7	Q02775	382 aa	Known RBP	6.1	□□□□□ -1.43
RPT3	YDR394W	ENT5	Q03769	411 aa	Known RBP	6.1	□□□□□ -1.43
RPT3	YDR394W	HMO1	Q03973	246 aa	Known RBP	6.1	□□□□□ -1.43
RPT3	YDR394W	PMT7	Q06644	662 aa		6.1	□□□□□ -1.43
RPT3	YDR394W	RPS10A	Q08745	105 aa	Predicted RBP	6.1	□□□□□ -1.43
RPT3	YDR394W	SNX3	Q08826	162 aa	Known RBP	6.1	□□□□□ -1.43
RPT3	YDR394W	PKH2	Q12236	1081 aa	Known RBP	6.1	□□□□□ -1.43
RPT3	YDR394W	ARP7	Q12406	477 aa		6.1	□□□□□ -1.43
RPT3	YDR394W	MOT1	P32333	1867 aa		6.09	□□□□□ -1.43
RPT3	YDR394W	MSD1	P15179	658 aa	Known RBP	6.09	□□□□□ -1.43
RPT3	YDR394W	MET16	P18408	261 aa	Predicted RBP	6.09	□□□□□ -1.43
RPT3	YDR394W	ATP12	P22135	325 aa		6.09	□□□□□ -1.43
RPT3	YDR394W	AIM26	P32858	118 aa		6.09	□□□□□ -1.43
RPT3	YDR394W	HSP78	P33416	811 aa		6.09	□□□□□ -1.43
RPT3	YDR394W	TFC3	P34111	1160 aa		6.09	□□□□□ -1.43
RPT3	YDR394W	NUP120	P35729	1037 aa		6.09	□□□□□ -1.43
RPT3	YDR394W	HMT1	P38074	348 aa		6.09	□□□□□ -1.43
RPT3	YDR394W	PPX1	P38698	397 aa		6.09	□□□□□ -1.43
RPT3	YDR394W	YDR089W	P38966	869 aa		6.09	□□□□□ -1.43
RPT3	YDR394W	FHL1	P39521	936 aa		6.09	□□□□□ -1.43
RPT3	YDR394W	MEF2	P39677	819 aa		6.09	□□□□□ -1.43
RPT3	YDR394W	MAF1	P41910	395 aa		6.09	□□□□□ -1.43
RPT3	YDR394W	YJR142W	P47173	342 aa		6.09	□□□□□ -1.43
RPT3	YDR394W	SAM37	P50110	327 aa		6.09	□□□□□ -1.43
RPT3	YDR394W	NUP84	P52891	726 aa		6.09	□□□□□ -1.43
RPT3	YDR394W	NCS6	P53088	359 aa		6.09	□□□□□ -1.43
RPT3	YDR394W	MON1	P53129	644 aa		6.09	□□□□□ -1.43
RPT3	YDR394W	BUD32	P53323	261 aa		6.09	□□□□□ -1.43
RPT3	YDR394W	COP1	P53622	1201 aa	Known RBP	6.09	□□□□□ -1.43
RPT3	YDR394W	ARA2	Q04212	335 aa		6.09	□□□□□ -1.43
RPT3	YDR394W	ARP9	Q05123	467 aa		6.09	□□□□□ -1.43
RPT3	YDR394W	GIC2	Q06648	383 aa		6.09	□□□□□ -1.43
RPT3	YDR394W	LAA1	P39526	2014 aa		6.09	□□□□□ -1.43
RPT3	YDR394W	CIT2	P08679	460 aa		6.08	□□□□□ -1.44
RPT3	YDR394W	GCD2	P12754	651 aa	Predicted RBP	6.08	□□□□□ -1.44
RPT3	YDR394W	KGD2	P19262	463 aa	Predicted RBP	6.08	□□□□□ -1.44
RPT3	YDR394W	PRP6	P19735	899 aa	Predicted RBP	6.08	□□□□□ -1.44
RPT3	YDR394W	RAD14	P28519	371 aa		6.08	□□□□□ -1.44
RPT3	YDR394W	VPH1	P32563	840 aa	Known RBP	6.08	□□□□□ -1.44
RPT3	YDR394W	DSS4	P32601	143 aa		6.08	□□□□□ -1.44

Retrieved 100 of 5,963 RNA–protein pairs in 20.3 ms