RNA–Protein interactions for RNA: YDR235W

PRP42, Transcript of U1 snRNP protein involved in splicing, yeastyeast

Gene PRP42, Length 1,635 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP42YDR235W SGF73P53165 657 aa1.09□□□□□ -2.23
PRP42YDR235W ADE16P54113 591 aaKnown RBP1.09□□□□□ -2.23
PRP42YDR235W YMR178WQ03219 274 aaKnown RBP1.09□□□□□ -2.23
PRP42YDR235W CTL1Q03220 320 aaKnown RBP1.09□□□□□ -2.23
PRP42YDR235W PEX15Q08215 383 aa1.09□□□□□ -2.23
PRP42YDR235W YDL012CQ12489 107 aa1.09□□□□□ -2.23
PRP42YDR235W GDH1P07262 454 aaKnown RBP1.08□□□□□ -2.24
PRP42YDR235W MSN2P33748 704 aa1.08□□□□□ -2.24
PRP42YDR235W TGL1P34163 548 aa1.08□□□□□ -2.24
PRP42YDR235W YLF2P38746 405 aa1.08□□□□□ -2.24
PRP42YDR235W IMA5P40884 581 aa1.08□□□□□ -2.24
PRP42YDR235W HXT9P40885 567 aa1.08□□□□□ -2.24
PRP42YDR235W YJL132WP47014 750 aa1.08□□□□□ -2.24
PRP42YDR235W YDL186WP48568 277 aa1.08□□□□□ -2.24
PRP42YDR235W ARP10Q04549 284 aa1.08□□□□□ -2.24
PRP42YDR235W GTB1Q04924 702 aa1.08□□□□□ -2.24
PRP42YDR235W CRD1Q07560 283 aa1.08□□□□□ -2.24
PRP42YDR235W AAD4Q07747 329 aa1.08□□□□□ -2.24
PRP42YDR235W VAS1P07806 1104 aaKnown RBP1.07□□□□□ -2.24
PRP42YDR235W CHO1P08456 276 aa1.07□□□□□ -2.24
PRP42YDR235W PHO3P24031 467 aa1.07□□□□□ -2.24
PRP42YDR235W AGA1P32323 725 aa1.07□□□□□ -2.24
PRP42YDR235W ADE17P38009 592 aaKnown RBP1.07□□□□□ -2.24
PRP42YDR235W SEC31P38968 1273 aaKnown RBP1.07□□□□□ -2.24
PRP42YDR235W DIM1P41819 318 aaKnown RBP1.07□□□□□ -2.24
PRP42YDR235W PUS4P48567 403 aaKnown RBP1.07□□□□□ -2.24
PRP42YDR235W MAK10Q02197 733 aa1.07□□□□□ -2.24
PRP42YDR235W PFA5Q03289 374 aa1.07□□□□□ -2.24
PRP42YDR235W PAL1Q05518 499 aaKnown RBP1.07□□□□□ -2.24
PRP42YDR235W ICL2Q12031 575 aa1.07□□□□□ -2.24
PRP42YDR235W ADH4P10127 382 aa1.07□□□□□ -2.24
PRP42YDR235W URK1P27515 501 aa1.07□□□□□ -2.24
PRP42YDR235W TAF5P38129 798 aa1.07□□□□□ -2.24
PRP42YDR235W YBP1P38315 674 aa1.07□□□□□ -2.24
PRP42YDR235W YJL068CP40363 299 aa1.07□□□□□ -2.24
PRP42YDR235W GUF1P46943 645 aa1.07□□□□□ -2.24
PRP42YDR235W TAM41P53230 385 aa1.07□□□□□ -2.24
PRP42YDR235W RNY1Q02933 434 aaKnown RBP1.07□□□□□ -2.24
PRP42YDR235W TMA64Q04600 565 aaKnown RBP1.07□□□□□ -2.24
PRP42YDR235W NUR1Q12066 484 aa1.07□□□□□ -2.24
PRP42YDR235W SLX4Q12098 748 aa1.07□□□□□ -2.24
PRP42YDR235W BAG7Q12128 409 aa1.07□□□□□ -2.24
PRP42YDR235W RVB2Q12464 471 aaKnown RBP1.07□□□□□ -2.24
PRP42YDR235W RPL15AP05748 204 aaKnown RBP1.06□□□□□ -2.24
PRP42YDR235W YSP3P25036 478 aa1.06□□□□□ -2.24
PRP42YDR235W GID7P25569 745 aa1.06□□□□□ -2.24
PRP42YDR235W RFA2P26754 273 aaKnown RBP1.06□□□□□ -2.24
PRP42YDR235W ERG1P32476 496 aaKnown RBP1.06□□□□□ -2.24
PRP42YDR235W UBP13P38187 747 aa1.06□□□□□ -2.24
PRP42YDR235W RFC1P38630 861 aaKnown RBP1.06□□□□□ -2.24
PRP42YDR235W SWD1P39706 426 aa1.06□□□□□ -2.24
PRP42YDR235W BUD16P39988 312 aa1.06□□□□□ -2.24
PRP42YDR235W RPT2P40327 437 aaKnown RBP1.06□□□□□ -2.24
PRP42YDR235W YJL213WP40896 331 aa1.06□□□□□ -2.24
PRP42YDR235W YGL039WP53183 348 aaKnown RBP1.06□□□□□ -2.24
PRP42YDR235W HCR1Q05775 265 aaKnown RBP1.06□□□□□ -2.24
PRP42YDR235W FRD1P32614 470 aaKnown RBP1.05□□□□□ -2.24
PRP42YDR235W PRS1P32895 427 aaKnown RBP1.05□□□□□ -2.24
PRP42YDR235W MIC60P36112 540 aa1.05□□□□□ -2.24
PRP42YDR235W STV1P37296 890 aa1.05□□□□□ -2.24
PRP42YDR235W ERG7P38604 731 aa1.05□□□□□ -2.24
PRP42YDR235W NMD2P38798 1089 aaKnown RBP1.05□□□□□ -2.24
PRP42YDR235W DJP1P40564 432 aa1.05□□□□□ -2.24
PRP42YDR235W IGO1P53897 168 aa1.05□□□□□ -2.24
PRP42YDR235W YPL108WQ02872 168 aaPredicted RBP1.05□□□□□ -2.24
PRP42YDR235W YDL218WQ07629 317 aa1.05□□□□□ -2.24
PRP42YDR235W TRE2Q08693 809 aa1.05□□□□□ -2.24
PRP42YDR235W YGR161W-CQ3E744 92 aa1.05□□□□□ -2.24
PRP42YDR235W PET111P08468 800 aa1.04□□□□□ -2.24
PRP42YDR235W KAR1P11927 433 aa1.04□□□□□ -2.24
PRP42YDR235W TKL1P23254 680 aaKnown RBP1.04□□□□□ -2.24
PRP42YDR235W CLB2P24869 491 aa1.04□□□□□ -2.24
PRP42YDR235W ATS1P31386 333 aa1.04□□□□□ -2.24
PRP42YDR235W AGP2P38090 596 aa1.04□□□□□ -2.24
PRP42YDR235W YER130CP39959 443 aa1.04□□□□□ -2.24
PRP42YDR235W COS10P52924 374 aa1.04□□□□□ -2.24
PRP42YDR235W YTP1P53584 459 aa1.04□□□□□ -2.24
PRP42YDR235W NUP100Q02629 959 aa1.04□□□□□ -2.24
PRP42YDR235W ATG21Q02887 496 aa1.04□□□□□ -2.24
PRP42YDR235W TMC1Q08422 150 aaPredicted RBP1.04□□□□□ -2.24
PRP42YDR235W YML003WP0CF16 290 aa1.04□□□□□ -2.24
PRP42YDR235W RPB8P20436 146 aa1.04□□□□□ -2.24
PRP42YDR235W MCK1P21965 375 aaKnown RBP1.04□□□□□ -2.24
PRP42YDR235W MCM3P24279 971 aaKnown RBP1.04□□□□□ -2.24
PRP42YDR235W SAC1P32368 623 aaKnown RBP1.04□□□□□ -2.24
PRP42YDR235W SDS22P36047 338 aa1.04□□□□□ -2.24
PRP42YDR235W TIF5P38431 405 aaKnown RBP1.04□□□□□ -2.24
PRP42YDR235W SAW1P39735 261 aa1.04□□□□□ -2.24
PRP42YDR235W RPH1P39956 796 aa1.04□□□□□ -2.24
PRP42YDR235W PHM6Q05637 104 aa1.04□□□□□ -2.24
PRP42YDR235W RAP1P11938 827 aa1.03□□□□□ -2.24
PRP42YDR235W SRP54P20424 541 aaKnown RBP1.03□□□□□ -2.24
PRP42YDR235W SPC34P36131 295 aa1.03□□□□□ -2.24
PRP42YDR235W YBR071WP38243 211 aa1.03□□□□□ -2.24
PRP42YDR235W PHO90P39535 881 aa1.03□□□□□ -2.24
PRP42YDR235W YEN1P40028 759 aa1.03□□□□□ -2.24
PRP42YDR235W RGI2P40188 164 aa1.03□□□□□ -2.24
PRP42YDR235W CAB2P40506 365 aa1.03□□□□□ -2.24
PRP42YDR235W YFR016CP43597 1233 aaKnown RBP1.03□□□□□ -2.24
PRP42YDR235W IKS1P47042 667 aa1.03□□□□□ -2.24
Retrieved 100 of 5,963 RNA–protein pairs in 88.9 ms