RNA–Protein interactions for RNA: YDR080W

VPS41, Transcript of Subunit of the HOPS endocytic tethering complex, yeastyeast

Gene VPS41, Length 2,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS41YDR080W TIF5P38431 405 aaKnown RBP2.76□□□□□ -1.97
VPS41YDR080W YHR054CP38780 354 aa2.76□□□□□ -1.97
VPS41YDR080W PAC2P39937 518 aa2.76□□□□□ -1.97
VPS41YDR080W SPO22P40511 975 aa2.76□□□□□ -1.97
VPS41YDR080W CHS6P40955 746 aa2.76□□□□□ -1.97
VPS41YDR080W NMA2P53204 395 aa2.76□□□□□ -1.97
VPS41YDR080W CAF130P53280 1122 aaPredicted RBP2.76□□□□□ -1.97
VPS41YDR080W ALG11P53954 548 aaKnown RBP2.76□□□□□ -1.97
VPS41YDR080W IES4Q08561 116 aa2.76□□□□□ -1.97
VPS41YDR080W TUB1P09733 447 aaKnown RBP2.76□□□□□ -1.97
VPS41YDR080W GLN4P13188 809 aaKnown RBP2.76□□□□□ -1.97
VPS41YDR080W TFB1P32776 642 aa2.76□□□□□ -1.97
VPS41YDR080W GMH1P36125 273 aa2.76□□□□□ -1.97
VPS41YDR080W GPP1P41277 250 aaKnown RBP2.76□□□□□ -1.97
VPS41YDR080W IML2P47031 731 aa2.76□□□□□ -1.97
VPS41YDR080W YDL183CP48569 320 aa2.76□□□□□ -1.97
VPS41YDR080W RTT102P53330 157 aa2.76□□□□□ -1.97
VPS41YDR080W YNL146WP53906 100 aa2.76□□□□□ -1.97
VPS41YDR080W HFD1Q04458 532 aa2.76□□□□□ -1.97
VPS41YDR080W LEA1Q08963 238 aaPredicted RBP2.76□□□□□ -1.97
VPS41YDR080W STE4P18851 423 aa2.75□□□□□ -1.97
VPS41YDR080W LEU5P38702 357 aa2.75□□□□□ -1.97
VPS41YDR080W BTT1P40314 149 aaPredicted RBP2.75□□□□□ -1.97
VPS41YDR080W IMO32P53219 342 aa2.75□□□□□ -1.97
VPS41YDR080W SPC98P53540 846 aa2.75□□□□□ -1.97
VPS41YDR080W STP1Q00947 519 aa2.75□□□□□ -1.97
VPS41YDR080W YDL057WQ07379 328 aa2.75□□□□□ -1.97
VPS41YDR080W OSW1Q08692 278 aa2.75□□□□□ -1.97
VPS41YDR080W MDM10P18409 493 aa2.75□□□□□ -1.97
VPS41YDR080W MMS4P38257 691 aa2.75□□□□□ -1.97
VPS41YDR080W NCS2P53923 493 aaPredicted RBP2.75□□□□□ -1.97
VPS41YDR080W ILV1P00927 576 aaKnown RBP2.74□□□□□ -1.97
VPS41YDR080W REV1P12689 985 aa2.74□□□□□ -1.97
VPS41YDR080W RPC53P25441 422 aa2.74□□□□□ -1.97
VPS41YDR080W YMC1P32331 307 aa2.74□□□□□ -1.97
VPS41YDR080W SFP1P32432 683 aa2.74□□□□□ -1.97
VPS41YDR080W OAF3P36023 863 aa2.74□□□□□ -1.97
VPS41YDR080W ELF1P36053 145 aa2.74□□□□□ -1.97
VPS41YDR080W CUE3P53137 624 aaKnown RBP2.74□□□□□ -1.97
VPS41YDR080W YPL014WQ02606 381 aa2.74□□□□□ -1.97
VPS41YDR080W BSP1Q06604 576 aa2.74□□□□□ -1.97
VPS41YDR080W YDL086WQ07505 273 aa2.74□□□□□ -1.97
VPS41YDR080W ADE4P04046 510 aaKnown RBP2.74□□□□□ -1.97
VPS41YDR080W CDC43P18898 376 aa2.74□□□□□ -1.97
VPS41YDR080W CKA2P19454 339 aa2.74□□□□□ -1.97
VPS41YDR080W PDE1P22434 369 aa2.74□□□□□ -1.97
VPS41YDR080W RAD16P31244 790 aa2.74□□□□□ -1.97
VPS41YDR080W PRP19P32523 503 aaKnown RBP2.74□□□□□ -1.97
VPS41YDR080W MRPL40P36534 297 aa2.74□□□□□ -1.97
VPS41YDR080W UME6P39001 836 aa2.74□□□□□ -1.97
VPS41YDR080W OAF1P39720 1047 aaPredicted RBP2.74□□□□□ -1.97
VPS41YDR080W FTR1P40088 404 aa2.74□□□□□ -1.97
VPS41YDR080W VTC2P43585 828 aa2.74□□□□□ -1.97
VPS41YDR080W RMD8P43620 662 aa2.74□□□□□ -1.97
VPS41YDR080W DIP5P53388 608 aa2.74□□□□□ -1.97
VPS41YDR080W YAT1P80235 687 aa2.74□□□□□ -1.97
VPS41YDR080W COQ11Q05892 277 aa2.74□□□□□ -1.97
VPS41YDR080W RKI1Q12189 258 aa2.74□□□□□ -1.97
VPS41YDR080W THR4P16120 514 aaKnown RBP2.73□□□□□ -1.97
VPS41YDR080W CBP3P21560 335 aa2.73□□□□□ -1.97
VPS41YDR080W DMC1P25453 334 aa2.73□□□□□ -1.97
VPS41YDR080W MF(ALPHA)2P32435 120 aa2.73□□□□□ -1.97
VPS41YDR080W DAL3P32459 195 aa2.73□□□□□ -1.97
VPS41YDR080W MUP3P38734 546 aa2.73□□□□□ -1.97
VPS41YDR080W PCI8P40512 444 aa2.73□□□□□ -1.97
VPS41YDR080W POL31P46957 487 aa2.73□□□□□ -1.97
VPS41YDR080W GPD1Q00055 391 aaKnown RBP2.73□□□□□ -1.97
VPS41YDR080W DIA2Q08496 732 aaPredicted RBP2.73□□□□□ -1.97
VPS41YDR080W TAF10Q12030 206 aa2.73□□□□□ -1.97
VPS41YDR080W TIP41Q12199 356 aa2.73□□□□□ -1.97
VPS41YDR080W TPK1P06244 397 aa2.73□□□□□ -1.97
VPS41YDR080W ERG20P08524 352 aaKnown RBP2.73□□□□□ -1.97
VPS41YDR080W SSB1P11484 613 aaKnown RBP2.73□□□□□ -1.97
VPS41YDR080W TUP1P16649 713 aa2.73□□□□□ -1.97
VPS41YDR080W YSC83P32792 385 aa2.73□□□□□ -1.97
VPS41YDR080W UTH1P36135 365 aa2.73□□□□□ -1.97
VPS41YDR080W SSB2P40150 613 aaKnown RBP2.73□□□□□ -1.97
VPS41YDR080W PIG2P40187 538 aa2.73□□□□□ -1.97
VPS41YDR080W SEC5P89102 971 aa2.73□□□□□ -1.97
VPS41YDR080W TRS130Q03660 1102 aa2.73□□□□□ -1.97
VPS41YDR080W NKP2Q06162 153 aa2.73□□□□□ -1.97
VPS41YDR080W SGT2Q12118 346 aaKnown RBP2.73□□□□□ -1.97
VPS41YDR080W RPS17AP02407 136 aaKnown RBP2.73□□□□□ -1.97
VPS41YDR080W RPS17BP14127 136 aaKnown RBP2.73□□□□□ -1.97
VPS41YDR080W ATP12P22135 325 aa2.73□□□□□ -1.97
VPS41YDR080W PPH22P23595 377 aa2.73□□□□□ -1.97
VPS41YDR080W VPS3P23643 1011 aa2.73□□□□□ -1.97
VPS41YDR080W SWE1P32944 819 aa2.73□□□□□ -1.97
VPS41YDR080W VID24P38263 362 aa2.73□□□□□ -1.97
VPS41YDR080W ATG12P38316 186 aa2.73□□□□□ -1.97
VPS41YDR080W TDA3P38758 523 aa2.73□□□□□ -1.97
VPS41YDR080W ASN1P49089 572 aaKnown RBP2.73□□□□□ -1.97
VPS41YDR080W MRK1P50873 501 aa2.73□□□□□ -1.97
VPS41YDR080W TDA7P53882 636 aaPredicted RBP2.73□□□□□ -1.97
VPS41YDR080W TOF2Q02208 771 aa2.73□□□□□ -1.97
VPS41YDR080W AIM33Q04516 312 aa2.73□□□□□ -1.97
VPS41YDR080W THI7Q05998 598 aa2.73□□□□□ -1.97
VPS41YDR080W YNL162W-AQ3E7A8 72 aa2.73□□□□□ -1.97
VPS41YDR080W TOR2P32600 2474 aaKnown RBP2.72□□□□□ -1.97
VPS41YDR080W SIR1P21691 654 aa2.72□□□□□ -1.97
Retrieved 100 of 5,963 RNA–protein pairs in 20.4 ms