RNA–Protein interactions for RNA: YDR079C-A

TFB5, Transcript of Component of RNA polymerase II general transcription factor TFIIH, yeastyeast

Gene TFB5, Length 219 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TFB5YDR079C-A YMR027WQ04371 470 aa0.21□□□□□ -2.38
TFB5YDR079C-A YEH2Q07950 538 aa0.21□□□□□ -2.38
TFB5YDR079C-A AYT1Q12226 474 aa0.21□□□□□ -2.38
TFB5YDR079C-A YOL098CQ12496 1037 aa0.21□□□□□ -2.38
TFB5YDR079C-A INO80P53115 1489 aa0.21□□□□□ -2.38
TFB5YDR079C-A SAL1D6W196 494 aa0.2□□□□□ -2.38
TFB5YDR079C-A DGR2P32330 852 aa0.2□□□□□ -2.38
TFB5YDR079C-A TYS1P36421 394 aaKnown RBP0.2□□□□□ -2.38
TFB5YDR079C-A RRP3P38712 501 aaKnown RBP0.2□□□□□ -2.38
TFB5YDR079C-A RGI2P40188 164 aa0.2□□□□□ -2.38
TFB5YDR079C-A DIA1P54005 336 aa0.2□□□□□ -2.38
TFB5YDR079C-A MAK10Q02197 733 aa0.2□□□□□ -2.38
TFB5YDR079C-A YLR049CQ12110 428 aa0.2□□□□□ -2.38
TFB5YDR079C-A BEM2P39960 2167 aaKnown RBP0.19□□□□□ -2.38
TFB5YDR079C-A YBR056W-AI2HB52 66 aa0.19□□□□□ -2.38
TFB5YDR079C-A YBL059WP34224 193 aa0.19□□□□□ -2.38
TFB5YDR079C-A NDT80P38830 627 aa0.19□□□□□ -2.38
TFB5YDR079C-A SNG1P46950 547 aa0.19□□□□□ -2.38
TFB5YDR079C-A MSO1P53604 210 aaKnown RBP0.19□□□□□ -2.38
TFB5YDR079C-A TDA7P53882 636 aaPredicted RBP0.19□□□□□ -2.38
TFB5YDR079C-A CRF1Q04930 467 aa0.19□□□□□ -2.38
TFB5YDR079C-A ADH2P00331 348 aaKnown RBP0.18□□□□□ -2.38
TFB5YDR079C-A PHO8P11491 566 aa0.18□□□□□ -2.38
TFB5YDR079C-A HXT4P32467 576 aa0.18□□□□□ -2.38
TFB5YDR079C-A PAH1P32567 862 aa0.18□□□□□ -2.38
TFB5YDR079C-A MTC4P38335 694 aaKnown RBP0.18□□□□□ -2.38
TFB5YDR079C-A CHZ1P40019 153 aaPredicted RBP0.18□□□□□ -2.38
TFB5YDR079C-A CHS6P40955 746 aa0.18□□□□□ -2.38
TFB5YDR079C-A YGL081WP53156 320 aa0.18□□□□□ -2.38
TFB5YDR079C-A MOT3P54785 490 aaKnown RBP0.18□□□□□ -2.38
TFB5YDR079C-A RBA50Q04418 439 aa0.18□□□□□ -2.38
TFB5YDR079C-A HFI1Q12060 488 aa0.18□□□□□ -2.38
TFB5YDR079C-A ERV2Q12284 196 aa0.18□□□□□ -2.38
TFB5YDR079C-A APM4Q99186 491 aa0.18□□□□□ -2.38
TFB5YDR079C-A UTP20P35194 2493 aaKnown RBP0.18□□□□□ -2.38
TFB5YDR079C-A COX1P00401 534 aa0.17□□□□□ -2.38
TFB5YDR079C-A RPL20AP0CX23 172 aaKnown RBP0.17□□□□□ -2.38
TFB5YDR079C-A RPL20BP0CX24 172 aaPredicted RBP0.17□□□□□ -2.38
TFB5YDR079C-A RVS161P25343 265 aaKnown RBP0.17□□□□□ -2.38
TFB5YDR079C-A RER1P25560 188 aa0.17□□□□□ -2.38
TFB5YDR079C-A ARK1P53974 638 aa0.17□□□□□ -2.38
TFB5YDR079C-A ELP3Q02908 557 aaKnown RBP0.17□□□□□ -2.38
TFB5YDR079C-A UGO1Q03327 502 aa0.17□□□□□ -2.38
TFB5YDR079C-A VPS5Q92331 675 aa0.17□□□□□ -2.38
TFB5YDR079C-A SIN3P22579 1536 aa0.17□□□□□ -2.38
TFB5YDR079C-A TOM1Q03280 3268 aa0.16□□□□□ -2.38
TFB5YDR079C-A SUI3P09064 285 aaKnown RBP0.16□□□□□ -2.38
TFB5YDR079C-A PRE2P30656 287 aaKnown RBP0.16□□□□□ -2.38
TFB5YDR079C-A SAC6P32599 642 aaKnown RBP0.16□□□□□ -2.38
TFB5YDR079C-A PTR2P32901 601 aa0.16□□□□□ -2.38
TFB5YDR079C-A DRE2P36152 348 aa0.16□□□□□ -2.38
TFB5YDR079C-A ECM9Q02202 377 aa0.16□□□□□ -2.38
TFB5YDR079C-A NUP100Q02629 959 aa0.16□□□□□ -2.38
TFB5YDR079C-A YLR001CQ07895 862 aa0.16□□□□□ -2.38
TFB5YDR079C-A VPS13Q07878 3144 aa0.16□□□□□ -2.38
TFB5YDR079C-A DNA2P38859 1522 aa0.15□□□□□ -2.39
TFB5YDR079C-A HSP26P15992 214 aaKnown RBP RIP-Chip data0.15□□□□□ -2.39not detected
TFB5YDR079C-A PDE1P22434 369 aa0.15□□□□□ -2.39
TFB5YDR079C-A ARO2P28777 376 aaKnown RBP0.15□□□□□ -2.39
TFB5YDR079C-A ACH1P32316 526 aa0.15□□□□□ -2.39
TFB5YDR079C-A PHM8P40025 321 aa0.15□□□□□ -2.39
TFB5YDR079C-A WSC2P53832 503 aa0.15□□□□□ -2.39
TFB5YDR079C-A YHM2Q04013 314 aa0.15□□□□□ -2.39
TFB5YDR079C-A CDC45Q08032 650 aa0.15□□□□□ -2.39
TFB5YDR079C-A YBR255C-AQ3E776 120 aa0.15□□□□□ -2.39
TFB5YDR079C-A CHD1P32657 1468 aa0.15□□□□□ -2.39
TFB5YDR079C-A IRA2P19158 3079 aa0.14□□□□□ -2.39
TFB5YDR079C-A RPL40AP0CH08 128 aaKnown RBP0.14□□□□□ -2.39
TFB5YDR079C-A RPL40BP0CH09 128 aaKnown RBP0.14□□□□□ -2.39
TFB5YDR079C-A RPB8P20436 146 aa0.14□□□□□ -2.39
TFB5YDR079C-A STV1P37296 890 aa0.14□□□□□ -2.39
TFB5YDR079C-A CHK1P38147 527 aa0.14□□□□□ -2.39
TFB5YDR079C-A YGR153WP48238 217 aa0.14□□□□□ -2.39
TFB5YDR079C-A VPS64Q03944 604 aa0.14□□□□□ -2.39
TFB5YDR079C-A YDL218WQ07629 317 aa0.14□□□□□ -2.39
TFB5YDR079C-A FMP45Q07651 309 aa0.14□□□□□ -2.39
TFB5YDR079C-A POM152P39685 1337 aa0.13□□□□□ -2.39
TFB5YDR079C-A TAO3P40468 2376 aa0.13□□□□□ -2.39
TFB5YDR079C-A TOR2P32600 2474 aaKnown RBP0.13□□□□□ -2.39
TFB5YDR079C-A MDN1Q12019 4910 aaKnown RBP0.13□□□□□ -2.39
TFB5YDR079C-A URA3P03962 267 aa0.13□□□□□ -2.39
TFB5YDR079C-A MRC1P25588 1096 aa0.13□□□□□ -2.39
TFB5YDR079C-A MSH2P25847 964 aa0.13□□□□□ -2.39
TFB5YDR079C-A FUN19P28003 413 aaPredicted RBP0.13□□□□□ -2.39
TFB5YDR079C-A TUL1P36096 758 aa0.13□□□□□ -2.39
TFB5YDR079C-A RFC1P38630 861 aaKnown RBP0.13□□□□□ -2.39
TFB5YDR079C-A EMP65P40085 556 aa0.13□□□□□ -2.39
TFB5YDR079C-A MNT2P53059 558 aa0.13□□□□□ -2.39
TFB5YDR079C-A MSS11Q03825 758 aa0.13□□□□□ -2.39
TFB5YDR079C-A MRPL35Q06678 367 aa0.13□□□□□ -2.39
TFB5YDR079C-A AAD4Q07747 329 aa0.13□□□□□ -2.39
TFB5YDR079C-A IRA1P18963 3092 aa0.13□□□□□ -2.39
TFB5YDR079C-A HHF1P02309 103 aaKnown RBP0.12□□□□□ -2.39
TFB5YDR079C-A RPS21AP0C0V8 87 aaKnown RBP0.12□□□□□ -2.39
TFB5YDR079C-A MCM3P24279 971 aaKnown RBP0.12□□□□□ -2.39
TFB5YDR079C-A PHD1P36093 366 aa0.12□□□□□ -2.39
TFB5YDR079C-A PAM1P37304 830 aaKnown RBP0.12□□□□□ -2.39
TFB5YDR079C-A ARB1P40024 610 aaKnown RBP0.12□□□□□ -2.39
TFB5YDR079C-A SCD6P45978 349 aaKnown RBP RIP-Chip data0.12□□□□□ -2.39not detected
TFB5YDR079C-A PBA1Q05778 276 aa0.12□□□□□ -2.39
Retrieved 100 of 5,963 RNA–protein pairs in 14 ms