RNA–Protein interactions for RNA: YDR008C

YDR008C, Transcript of Dubious open reading frame, yeastyeast

Gene YDR008C, Length 351 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YDR008CYDR008C VPS64Q03944 604 aa2.25□□□□□ -2.05
YDR008CYDR008C HIM1Q06674 414 aa2.25□□□□□ -2.05
YDR008CYDR008C PGI1P12709 554 aaKnown RBP2.24□□□□□ -2.05
YDR008CYDR008C PHO81P17442 1178 aa2.24□□□□□ -2.05
YDR008CYDR008C PTP2P29461 750 aa2.24□□□□□ -2.05
YDR008CYDR008C AGA1P32323 725 aa2.24□□□□□ -2.05
YDR008CYDR008C YEL045CP32616 141 aa2.24□□□□□ -2.05
YDR008CYDR008C RPF2P36160 344 aaKnown RBP2.24□□□□□ -2.05
YDR008CYDR008C YPK3P38070 525 aa2.24□□□□□ -2.05
YDR008CYDR008C SWD1P39706 426 aa2.24□□□□□ -2.05
YDR008CYDR008C HIS6P40545 261 aa2.24□□□□□ -2.05
YDR008CYDR008C TEP1P53916 434 aa2.24□□□□□ -2.05
YDR008CYDR008C MET14Q02196 202 aa2.24□□□□□ -2.05
YDR008CYDR008C UTP21Q06078 939 aaPredicted RBP2.24□□□□□ -2.05
YDR008CYDR008C MLC2Q06580 163 aa2.24□□□□□ -2.05
YDR008CYDR008C CRD1Q07560 283 aa2.24□□□□□ -2.05
YDR008CYDR008C YOL114CQ12322 202 aa2.24□□□□□ -2.05
YDR008CYDR008C ARP7Q12406 477 aa2.24□□□□□ -2.05
YDR008CYDR008C GDH1P07262 454 aaKnown RBP2.23□□□□□ -2.05
YDR008CYDR008C ADH4P10127 382 aa2.23□□□□□ -2.05
YDR008CYDR008C GUK1P15454 187 aaKnown RBP2.23□□□□□ -2.05
YDR008CYDR008C GCD7P32502 381 aaPredicted RBP2.23□□□□□ -2.05
YDR008CYDR008C SIP1P32578 815 aa2.23□□□□□ -2.05
YDR008CYDR008C YLF2P38746 405 aa2.23□□□□□ -2.05
YDR008CYDR008C NPA3P47122 385 aa2.23□□□□□ -2.05
YDR008CYDR008C YDL186WP48568 277 aa2.23□□□□□ -2.05
YDR008CYDR008C YNL234WP53857 426 aa2.23□□□□□ -2.05
YDR008CYDR008C TRS31Q03337 283 aa2.23□□□□□ -2.05
YDR008CYDR008C CRF1Q04930 467 aa2.23□□□□□ -2.05
YDR008CYDR008C YOL057WQ08225 711 aa2.23□□□□□ -2.05
YDR008CYDR008C GAL1P04385 528 aa2.22□□□□□ -2.05
YDR008CYDR008C ATP4P05626 244 aa2.22□□□□□ -2.05
YDR008CYDR008C NAT1P12945 854 aaKnown RBP2.22□□□□□ -2.05
YDR008CYDR008C PRE2P30656 287 aaKnown RBP2.22□□□□□ -2.05
YDR008CYDR008C APM3P38153 483 aa2.22□□□□□ -2.05
YDR008CYDR008C CAB2P40506 365 aa2.22□□□□□ -2.05
YDR008CYDR008C UBX6P47049 396 aa2.22□□□□□ -2.05
YDR008CYDR008C MAD3P47074 515 aa2.22□□□□□ -2.05
YDR008CYDR008C YJR008WP47085 338 aa2.22□□□□□ -2.05
YDR008CYDR008C TGL2P54857 326 aa2.22□□□□□ -2.05
YDR008CYDR008C ATG21Q02887 496 aa2.22□□□□□ -2.05
YDR008CYDR008C RSF1Q05043 376 aa2.22□□□□□ -2.05
YDR008CYDR008C AAD4Q07747 329 aa2.22□□□□□ -2.05
YDR008CYDR008C MIS1P09440 975 aaKnown RBP2.21□□□□□ -2.06
YDR008CYDR008C POL3P15436 1097 aa2.21□□□□□ -2.06
YDR008CYDR008C MRPL36P36531 177 aa2.21□□□□□ -2.06
YDR008CYDR008C FUN12P39730 1002 aaKnown RBP2.21□□□□□ -2.06
YDR008CYDR008C IMA5P40884 581 aa2.21□□□□□ -2.06
YDR008CYDR008C POL31P46957 487 aa2.21□□□□□ -2.06
YDR008CYDR008C PAP2P53632 584 aaKnown RBP2.21□□□□□ -2.06
YDR008CYDR008C CEG1Q01159 459 aaPredicted RBP2.21□□□□□ -2.06
YDR008CYDR008C YPL108WQ02872 168 aaPredicted RBP2.21□□□□□ -2.06
YDR008CYDR008C PIF1P07271 859 aa2.2□□□□□ -2.06
YDR008CYDR008C PDE1P22434 369 aa2.2□□□□□ -2.06
YDR008CYDR008C ARB1P40024 610 aaKnown RBP2.2□□□□□ -2.06
YDR008CYDR008C EKI1Q03764 534 aa2.2□□□□□ -2.06
YDR008CYDR008C IWR1Q07532 353 aaPredicted RBP2.2□□□□□ -2.06
YDR008CYDR008C PSR2Q07949 397 aa2.2□□□□□ -2.06
YDR008CYDR008C TMC1Q08422 150 aaPredicted RBP2.2□□□□□ -2.06
YDR008CYDR008C RRP6Q12149 733 aaKnown RBP2.2□□□□□ -2.06
YDR008CYDR008C RIT1P23796 513 aa2.19□□□□□ -2.06
YDR008CYDR008C MCM3P24279 971 aaKnown RBP2.19□□□□□ -2.06
YDR008CYDR008C PRP45P28004 379 aaPredicted RBP2.19□□□□□ -2.06
YDR008CYDR008C NUP120P35729 1037 aa2.19□□□□□ -2.06
YDR008CYDR008C STT3P39007 718 aaKnown RBP2.19□□□□□ -2.06
YDR008CYDR008C TIS11P47977 285 aa2.19□□□□□ -2.06
YDR008CYDR008C PUS4P48567 403 aaKnown RBP2.19□□□□□ -2.06
YDR008CYDR008C ESF2P53743 316 aaKnown RBP2.19□□□□□ -2.06
YDR008CYDR008C IGO1P53897 168 aa2.19□□□□□ -2.06
YDR008CYDR008C AIM6Q07716 390 aa2.19□□□□□ -2.06
YDR008CYDR008C RVB2Q12464 471 aaKnown RBP2.19□□□□□ -2.06
YDR008CYDR008C FAB1P34756 2278 aa2.19□□□□□ -2.06
YDR008CYDR008C ADE3P07245 946 aaKnown RBP2.18□□□□□ -2.06
YDR008CYDR008C NUC1P08466 329 aa2.18□□□□□ -2.06
YDR008CYDR008C PET122P10355 254 aa2.18□□□□□ -2.06
YDR008CYDR008C SIR1P21691 654 aa2.18□□□□□ -2.06
YDR008CYDR008C CLB4P24871 460 aa2.18□□□□□ -2.06
YDR008CYDR008C PTH2P34222 208 aa2.18□□□□□ -2.06
YDR008CYDR008C YHL041WP38730 149 aa2.18□□□□□ -2.06
YDR008CYDR008C PSF2P40359 213 aa2.18□□□□□ -2.06
YDR008CYDR008C FET5P43561 622 aa2.18□□□□□ -2.06
YDR008CYDR008C VMS1Q04311 632 aaKnown RBP2.18□□□□□ -2.06
YDR008CYDR008C ICL2Q12031 575 aa2.18□□□□□ -2.06
YDR008CYDR008C MSS18P08593 268 aa2.17□□□□□ -2.06
YDR008CYDR008C PFK2P16862 959 aaKnown RBP RIP-Chip data2.17□□□□□ -2.06not detected
YDR008CYDR008C RAD16P31244 790 aa2.17□□□□□ -2.06
YDR008CYDR008C UBX4P54730 416 aa2.17□□□□□ -2.06
YDR008CYDR008C MOT3P54785 490 aaKnown RBP2.17□□□□□ -2.06
YDR008CYDR008C MTG1Q03151 367 aaPredicted RBP2.17□□□□□ -2.06
YDR008CYDR008C IOC4Q04213 475 aa2.17□□□□□ -2.06
YDR008CYDR008C YDR109CQ04585 715 aa2.17□□□□□ -2.06
YDR008CYDR008C SUI3P09064 285 aaKnown RBP2.16□□□□□ -2.06
YDR008CYDR008C SWI4P25302 1093 aaKnown RBP2.16□□□□□ -2.06
YDR008CYDR008C ATS1P31386 333 aa2.16□□□□□ -2.06
YDR008CYDR008C ARP2P32381 391 aaKnown RBP2.16□□□□□ -2.06
YDR008CYDR008C MRS6P32864 603 aaKnown RBP2.16□□□□□ -2.06
YDR008CYDR008C FSH1P38777 243 aaKnown RBP2.16□□□□□ -2.06
YDR008CYDR008C UME6P39001 836 aa2.16□□□□□ -2.06
YDR008CYDR008C TPM2P40414 161 aa2.16□□□□□ -2.06
YDR008CYDR008C YIL161WP40449 235 aaKnown RBP2.16□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 23 ms