RNA–Protein interactions for RNA: YDL194W

SNF3, Transcript of Plasma membrane low glucose sensor, regulates glucose transport, yeastyeast

Gene SNF3, Length 2,655 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNF3YDL194W YIL092WP40497 633 aa5.03□□□□□ -1.6
SNF3YDL194W TED1P40533 473 aa5.03□□□□□ -1.6
SNF3YDL194W VMA13P41807 478 aaKnown RBP5.03□□□□□ -1.6
SNF3YDL194W SSU1P41930 458 aa5.03□□□□□ -1.6
SNF3YDL194W UBP6P43593 499 aaKnown RBP5.03□□□□□ -1.6
SNF3YDL194W RAI1P53063 387 aaKnown RBP5.03□□□□□ -1.6
SNF3YDL194W DUO1P53168 247 aaKnown RBP5.03□□□□□ -1.6
SNF3YDL194W YGR273CP53329 174 aa5.03□□□□□ -1.6
SNF3YDL194W MRPL50P53724 139 aa5.03□□□□□ -1.6
SNF3YDL194W DCS2Q12123 353 aa5.03□□□□□ -1.6
SNF3YDL194W GET3Q12154 354 aaKnown RBP5.03□□□□□ -1.6
SNF3YDL194W TIP41Q12199 356 aa5.03□□□□□ -1.6
SNF3YDL194W UBX3Q12229 455 aa5.03□□□□□ -1.6
SNF3YDL194W TAL1P15019 335 aaKnown RBP5.02□□□□□ -1.61
SNF3YDL194W RNR1P21524 888 aaKnown RBP5.02□□□□□ -1.61
SNF3YDL194W SIR1P21691 654 aa5.02□□□□□ -1.61
SNF3YDL194W SLY41P22215 453 aa5.02□□□□□ -1.61
SNF3YDL194W RPC34P32910 317 aa5.02□□□□□ -1.61
SNF3YDL194W YBR242WP38331 238 aa5.02□□□□□ -1.61
SNF3YDL194W BSD2P38356 321 aa5.02□□□□□ -1.61
SNF3YDL194W YHL012WP38709 493 aa5.02□□□□□ -1.61
SNF3YDL194W SOP4P39543 234 aaPredicted RBP5.02□□□□□ -1.61
SNF3YDL194W FRT2P39734 528 aa5.02□□□□□ -1.61
SNF3YDL194W YJR056CP47115 236 aa5.02□□□□□ -1.61
SNF3YDL194W MRX6P48564 524 aa5.02□□□□□ -1.61
SNF3YDL194W ROD1Q02805 837 aa5.02□□□□□ -1.61
SNF3YDL194W YDR444WQ04093 687 aa5.02□□□□□ -1.61
SNF3YDL194W YPR084WQ06821 456 aa5.02□□□□□ -1.61
SNF3YDL194W GSH2Q08220 491 aa5.02□□□□□ -1.61
SNF3YDL194W INP54Q08227 384 aaKnown RBP5.02□□□□□ -1.61
SNF3YDL194W RPL1AP0CX43 217 aaKnown RBP5.02□□□□□ -1.61
SNF3YDL194W RPL1BP0CX44 217 aaKnown RBP5.02□□□□□ -1.61
SNF3YDL194W SRV2P17555 526 aaKnown RBP5.02□□□□□ -1.61
SNF3YDL194W KGD2P19262 463 aaPredicted RBP5.02□□□□□ -1.61
SNF3YDL194W ATP7P30902 174 aa5.02□□□□□ -1.61
SNF3YDL194W HMT1P38074 348 aa5.02□□□□□ -1.61
SNF3YDL194W QRI1P43123 477 aaKnown RBP5.02□□□□□ -1.61
SNF3YDL194W SIP4P46954 829 aa5.02□□□□□ -1.61
SNF3YDL194W SLI1P53304 468 aa5.02□□□□□ -1.61
SNF3YDL194W RCF2P53721 224 aa5.02□□□□□ -1.61
SNF3YDL194W SLT2Q00772 484 aa5.02□□□□□ -1.61
SNF3YDL194W CAB1Q04430 367 aa5.02□□□□□ -1.61
SNF3YDL194W YPR027CQ12079 277 aa5.02□□□□□ -1.61
SNF3YDL194W INP53Q12271 1107 aa5.02□□□□□ -1.61
SNF3YDL194W YKL068W-AQ3E826 78 aa5.02□□□□□ -1.61
SNF3YDL194W STE2D6VTK4 431 aa5.01□□□□□ -1.61
SNF3YDL194W GAL4P04386 881 aa5.01□□□□□ -1.61
SNF3YDL194W MF(ALPHA)2P32435 120 aa5.01□□□□□ -1.61
SNF3YDL194W SPO23P33757 523 aa5.01□□□□□ -1.61
SNF3YDL194W YKL070WP36087 169 aa5.01□□□□□ -1.61
SNF3YDL194W MPT5P39016 859 aaKnown RBP RIP-Chip data5.01□□□□□ -1.61not detected
SNF3YDL194W FHL1P39521 936 aa5.01□□□□□ -1.61
SNF3YDL194W EFM3P47163 339 aa5.01□□□□□ -1.61
SNF3YDL194W PEF1P53238 335 aa5.01□□□□□ -1.61
SNF3YDL194W TWF1P53250 332 aa5.01□□□□□ -1.61
SNF3YDL194W RRN9P53437 365 aa5.01□□□□□ -1.61
SNF3YDL194W YNL181WP53878 407 aa5.01□□□□□ -1.61
SNF3YDL194W PLP1Q04004 230 aa5.01□□□□□ -1.61
SNF3YDL194W YLR225CQ05948 407 aaKnown RBP5.01□□□□□ -1.61
SNF3YDL194W PRP4P20053 465 aaKnown RBP5.01□□□□□ -1.61
SNF3YDL194W PRE10P21242 288 aaKnown RBP RIP-Chip data5.01□□□□□ -1.61not detected
SNF3YDL194W RHB1P25378 209 aa5.01□□□□□ -1.61
SNF3YDL194W PDC6P26263 563 aaKnown RBP5.01□□□□□ -1.61
SNF3YDL194W CTF13P35203 478 aa5.01□□□□□ -1.61
SNF3YDL194W BDF1P35817 686 aa5.01□□□□□ -1.61
SNF3YDL194W SMF1P38925 575 aa5.01□□□□□ -1.61
SNF3YDL194W ASG1P40467 964 aa5.01□□□□□ -1.61
SNF3YDL194W RTS2P40962 232 aa5.01□□□□□ -1.61
SNF3YDL194W GUS1P46655 708 aaKnown RBP RIP-Chip data5.01□□□□□ -1.61not detected
SNF3YDL194W YKE2P52553 114 aa5.01□□□□□ -1.61
SNF3YDL194W YNL115CP53925 644 aa5.01□□□□□ -1.61
SNF3YDL194W YDC1Q02896 317 aa5.01□□□□□ -1.61
SNF3YDL194W YMR210WQ03649 449 aa5.01□□□□□ -1.61
SNF3YDL194W DML1Q03652 475 aa5.01□□□□□ -1.61
SNF3YDL194W EMI2Q04409 500 aaKnown RBP5.01□□□□□ -1.61
SNF3YDL194W YMR114CQ04471 368 aaKnown RBP5.01□□□□□ -1.61
SNF3YDL194W CRF1Q04930 467 aa5.01□□□□□ -1.61
SNF3YDL194W YPR109WQ06104 294 aa5.01□□□□□ -1.61
SNF3YDL194W CTI6Q08923 506 aa5.01□□□□□ -1.61
SNF3YDL194W SIR3P06701 978 aa5□□□□□ -1.61
SNF3YDL194W VAS1P07806 1104 aaKnown RBP5□□□□□ -1.61
SNF3YDL194W YCR051WP25631 222 aa5□□□□□ -1.61
SNF3YDL194W MAC1P35192 417 aa5□□□□□ -1.61
SNF3YDL194W DBP7P36120 742 aaKnown RBP5□□□□□ -1.61
SNF3YDL194W RFT1P38206 574 aaPredicted RBP5□□□□□ -1.61
SNF3YDL194W HXT6P39003 570 aaKnown RBP5□□□□□ -1.61
SNF3YDL194W HXT7P39004 570 aa5□□□□□ -1.61
SNF3YDL194W CAB2P40506 365 aa5□□□□□ -1.61
SNF3YDL194W CAF16P43569 289 aa5□□□□□ -1.61
SNF3YDL194W IBA57P47158 497 aa5□□□□□ -1.61
SNF3YDL194W OKP1P53298 406 aa5□□□□□ -1.61
SNF3YDL194W STE20Q03497 939 aaKnown RBP5□□□□□ -1.61
SNF3YDL194W YMR265CQ03508 461 aaKnown RBP5□□□□□ -1.61
SNF3YDL194W YLL007CQ07799 665 aa5□□□□□ -1.61
SNF3YDL194W RPN8Q08723 338 aaKnown RBP5□□□□□ -1.61
SNF3YDL194W DAS2Q12084 232 aa5□□□□□ -1.61
SNF3YDL194W ZRT2Q12436 422 aa5□□□□□ -1.61
SNF3YDL194W RPS21AP0C0V8 87 aaKnown RBP5□□□□□ -1.61
SNF3YDL194W CDC23P16522 626 aa5□□□□□ -1.61
SNF3YDL194W CAP1P28495 268 aaKnown RBP5□□□□□ -1.61
Retrieved 100 of 5,963 RNA–protein pairs in 13 ms