RNA–Protein interactions for RNA: YDL036C

PUS9, Transcript of Mitochondrial tRNA:pseudouridine synthase, yeast

Gene PUS9, Length 1,389 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PUS9	YDL036C	PLM2	Q04383	521 aa		4.8	□□□□□ -1.64
PUS9	YDL036C	YML053C	Q04978	212 aa		4.8	□□□□□ -1.64
PUS9	YDL036C	RIX7	Q07844	837 aa	Known RBP	4.8	□□□□□ -1.64
PUS9	YDL036C	YOR019W	Q99248	730 aa		4.8	□□□□□ -1.64
PUS9	YDL036C	Q0010	Q9ZZX9	128 aa		4.8	□□□□□ -1.64
PUS9	YDL036C	CET1	O13297	549 aa	Predicted RBP	4.79	□□□□□ -1.64
PUS9	YDL036C	YBR085C-A	O43137	85 aa		4.79	□□□□□ -1.64
PUS9	YDL036C	YCK1	P23291	538 aa		4.79	□□□□□ -1.64
PUS9	YDL036C	LAC1	P28496	418 aa		4.79	□□□□□ -1.64
PUS9	YDL036C	RTS1	P38903	757 aa		4.79	□□□□□ -1.64
PUS9	YDL036C	NPR2	P39923	615 aa		4.79	□□□□□ -1.64
PUS9	YDL036C	PHM8	P40025	321 aa		4.79	□□□□□ -1.64
PUS9	YDL036C	ARF3	P40994	183 aa	RIP-Chip data	4.79	□□□□□ -1.64	not detected
PUS9	YDL036C	VTC2	P43585	828 aa		4.79	□□□□□ -1.64
PUS9	YDL036C	TAF11	Q04226	346 aa		4.79	□□□□□ -1.64
PUS9	YDL036C	RAD33	Q04231	177 aa		4.79	□□□□□ -1.64
PUS9	YDL036C	YDR109C	Q04585	715 aa		4.79	□□□□□ -1.64
PUS9	YDL036C	MFB1	Q04922	465 aa		4.79	□□□□□ -1.64
PUS9	YDL036C	YLR287C	Q05881	355 aa		4.79	□□□□□ -1.64
PUS9	YDL036C	SKG3	Q06315	1026 aa		4.79	□□□□□ -1.64
PUS9	YDL036C	CRN1	Q06440	651 aa		4.79	□□□□□ -1.64
PUS9	YDL036C	CTI6	Q08923	506 aa		4.79	□□□□□ -1.64
PUS9	YDL036C	PCL8	Q08966	492 aa		4.79	□□□□□ -1.64
PUS9	YDL036C	RCN2	Q12044	265 aa		4.79	□□□□□ -1.64
PUS9	YDL036C	AHA1	Q12449	350 aa	Known RBP	4.79	□□□□□ -1.64
PUS9	YDL036C	ERP4	Q12450	207 aa		4.79	□□□□□ -1.64
PUS9	YDL036C	YMR084W	A2P2R3	262 aa		4.78	□□□□□ -1.64
PUS9	YDL036C	PGK1	P00560	416 aa	Known RBP	4.78	□□□□□ -1.64
PUS9	YDL036C	RPL7A	P05737	244 aa	Known RBP	4.78	□□□□□ -1.64
PUS9	YDL036C	PMA2	P19657	947 aa		4.78	□□□□□ -1.64
PUS9	YDL036C	YSP3	P25036	478 aa		4.78	□□□□□ -1.64
PUS9	YDL036C	NFU1	P32860	256 aa		4.78	□□□□□ -1.64
PUS9	YDL036C	UTP9	P38882	575 aa	Known RBP	4.78	□□□□□ -1.64
PUS9	YDL036C	SAP1	P39955	897 aa	Known RBP	4.78	□□□□□ -1.64
PUS9	YDL036C	YFL015C	P43578	164 aa		4.78	□□□□□ -1.64
PUS9	YDL036C	YRB30	P53107	440 aa	Predicted RBP	4.78	□□□□□ -1.64
PUS9	YDL036C	VPS75	P53853	264 aa		4.78	□□□□□ -1.64
PUS9	YDL036C	YAT1	P80235	687 aa		4.78	□□□□□ -1.64
PUS9	YDL036C	AAT1	Q01802	451 aa		4.78	□□□□□ -1.64
PUS9	YDL036C	ARP9	Q05123	467 aa		4.78	□□□□□ -1.64
PUS9	YDL036C	SWA2	Q06677	668 aa		4.78	□□□□□ -1.64
PUS9	YDL036C	TCO89	Q08921	799 aa		4.78	□□□□□ -1.64
PUS9	YDL036C	LYS21	Q12122	440 aa	Known RBP	4.78	□□□□□ -1.64
PUS9	YDL036C	RPL7B	Q12213	244 aa	Known RBP	4.78	□□□□□ -1.64
PUS9	YDL036C	NUP1	P20676	1076 aa		4.78	□□□□□ -1.64
PUS9	YDL036C	RRP43	P25359	394 aa	Predicted RBP	4.78	□□□□□ -1.64
PUS9	YDL036C	NPL6	P32832	435 aa		4.78	□□□□□ -1.64
PUS9	YDL036C	AAP1	P37898	856 aa	Known RBP	4.78	□□□□□ -1.64
PUS9	YDL036C	TDA10	P42938	290 aa		4.78	□□□□□ -1.64
PUS9	YDL036C	RMD8	P43620	662 aa		4.78	□□□□□ -1.64
PUS9	YDL036C	INA17	Q02888	182 aa		4.78	□□□□□ -1.64
PUS9	YDL036C	HRD3	Q05787	833 aa		4.78	□□□□□ -1.64
PUS9	YDL036C	CIR2	Q08822	631 aa		4.78	□□□□□ -1.64
PUS9	YDL036C	HSH49	Q99181	213 aa	Predicted RBP	4.78	□□□□□ -1.64
PUS9	YDL036C	SES1	P07284	462 aa	Known RBP	4.77	□□□□□ -1.65
PUS9	YDL036C	STE12	P13574	688 aa		4.77	□□□□□ -1.65
PUS9	YDL036C	KAR3	P17119	729 aa		4.77	□□□□□ -1.65
PUS9	YDL036C	YNG2	P38806	282 aa	Known RBP	4.77	□□□□□ -1.65
PUS9	YDL036C	SEC31	P38968	1273 aa	Known RBP	4.77	□□□□□ -1.65
PUS9	YDL036C	JHD1	P40034	492 aa		4.77	□□□□□ -1.65
PUS9	YDL036C	SEC24	P40482	926 aa	Known RBP	4.77	□□□□□ -1.65
PUS9	YDL036C	CIR1	P42940	261 aa		4.77	□□□□□ -1.65
PUS9	YDL036C	SWP82	P43554	623 aa		4.77	□□□□□ -1.65
PUS9	YDL036C	MRX6	P48564	524 aa		4.77	□□□□□ -1.65
PUS9	YDL036C	DSD1	P53095	428 aa		4.77	□□□□□ -1.65
PUS9	YDL036C	ADE16	P54113	591 aa	Known RBP	4.77	□□□□□ -1.65
PUS9	YDL036C	RPT6	Q01939	405 aa	Known RBP	4.77	□□□□□ -1.65
PUS9	YDL036C	NGL3	Q03210	505 aa		4.77	□□□□□ -1.65
PUS9	YDL036C	ARG7	Q04728	441 aa		4.77	□□□□□ -1.65
PUS9	YDL036C	GPN2	Q08726	347 aa	Predicted RBP	4.77	□□□□□ -1.65
PUS9	YDL036C	PCT1	P13259	424 aa		4.76	□□□□□ -1.65
PUS9	YDL036C	CKA1	P15790	372 aa		4.76	□□□□□ -1.65
PUS9	YDL036C	SRP54	P20424	541 aa	Known RBP	4.76	□□□□□ -1.65
PUS9	YDL036C	SAT4	P25333	603 aa	Known RBP	4.76	□□□□□ -1.65
PUS9	YDL036C	OCA4	P25366	362 aa		4.76	□□□□□ -1.65
PUS9	YDL036C	YJU2	P28320	278 aa	Predicted RBP	4.76	□□□□□ -1.65
PUS9	YDL036C	PDB1	P32473	366 aa	Known RBP	4.76	□□□□□ -1.65
PUS9	YDL036C	UGP1	P32861	499 aa	Known RBP	4.76	□□□□□ -1.65
PUS9	YDL036C	KES1	P35844	434 aa	Known RBP	4.76	□□□□□ -1.65
PUS9	YDL036C	AUR1	P36107	401 aa	Predicted RBP	4.76	□□□□□ -1.65
PUS9	YDL036C	NTR2	P36118	322 aa	Predicted RBP	4.76	□□□□□ -1.65
PUS9	YDL036C	MAL33	P38157	468 aa		4.76	□□□□□ -1.65
PUS9	YDL036C	RPN11	P43588	306 aa	Known RBP	4.76	□□□□□ -1.65
PUS9	YDL036C	YNL058C	P53947	316 aa		4.76	□□□□□ -1.65
PUS9	YDL036C	ARG3	P05150	338 aa		4.75	□□□□□ -1.65
PUS9	YDL036C	FUR1	P18562	216 aa	Known RBP	4.75	□□□□□ -1.65
PUS9	YDL036C	PEP3	P27801	918 aa		4.75	□□□□□ -1.65
PUS9	YDL036C	AGP2	P38090	596 aa		4.75	□□□□□ -1.65
PUS9	YDL036C	TPA1	P40032	644 aa	Known RBP	4.75	□□□□□ -1.65
PUS9	YDL036C	MRX1	P40050	688 aa		4.75	□□□□□ -1.65
PUS9	YDL036C	ASG1	P40467	964 aa		4.75	□□□□□ -1.65
PUS9	YDL036C	YGL036W	P53185	909 aa	Predicted RBP	4.75	□□□□□ -1.65
PUS9	YDL036C	SYF1	Q04048	859 aa	Predicted RBP	4.75	□□□□□ -1.65
PUS9	YDL036C	UTP21	Q06078	939 aa	Predicted RBP	4.75	□□□□□ -1.65
PUS9	YDL036C	PSR1	Q07800	427 aa		4.75	□□□□□ -1.65
PUS9	YDL036C	ILV2	P07342	687 aa	Known RBP	4.74	□□□□□ -1.65
PUS9	YDL036C	CBS1	P14066	229 aa		4.74	□□□□□ -1.65
PUS9	YDL036C	RED1	P14291	827 aa		4.74	□□□□□ -1.65
PUS9	YDL036C	PTC6	P25646	442 aa		4.74	□□□□□ -1.65
PUS9	YDL036C	SOF1	P33750	489 aa	Known RBP	4.74	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 20.5 ms