RNA–Protein interactions for RNA: YBR223C

TDP1, Transcript of Tyrosyl-DNA phosphodiesterase I, yeastyeast

Gene TDP1, Length 1,635 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TDP1YBR223C ATG34Q12292 412 aa6.91□□□□□ -1.3
TDP1YBR223C YOR131CQ12486 218 aa6.91□□□□□ -1.3
TDP1YBR223C CMR1Q12510 522 aaKnown RBP6.91□□□□□ -1.3
TDP1YBR223C MST1P07236 462 aa6.9□□□□□ -1.3
TDP1YBR223C SEC63P14906 663 aa6.9□□□□□ -1.3
TDP1YBR223C CSM1P25651 190 aa6.9□□□□□ -1.3
TDP1YBR223C NGG1P32494 702 aa6.9□□□□□ -1.3
TDP1YBR223C YBR056WP38081 501 aa6.9□□□□□ -1.3
TDP1YBR223C SEO1P39709 593 aa6.9□□□□□ -1.3
TDP1YBR223C SLX8P40072 274 aa6.9□□□□□ -1.3
TDP1YBR223C SNL1P40548 159 aa6.9□□□□□ -1.3
TDP1YBR223C GET1P53192 235 aa6.9□□□□□ -1.3
TDP1YBR223C PEX8P53248 589 aa6.9□□□□□ -1.3
TDP1YBR223C RSC4Q02206 625 aa6.9□□□□□ -1.3
TDP1YBR223C YDR109CQ04585 715 aa6.9□□□□□ -1.3
TDP1YBR223C ECM38Q05902 660 aaPredicted RBP6.9□□□□□ -1.3
TDP1YBR223C YEH2Q07950 538 aa6.9□□□□□ -1.3
TDP1YBR223C MUM3Q08750 479 aa6.9□□□□□ -1.3
TDP1YBR223C GET4Q12125 312 aa6.9□□□□□ -1.3
TDP1YBR223C SVS1Q12254 260 aa6.9□□□□□ -1.3
TDP1YBR223C DBP10Q12389 995 aaKnown RBP6.9□□□□□ -1.3
TDP1YBR223C YPL247CQ12523 523 aa6.9□□□□□ -1.3
TDP1YBR223C TRP3P00937 484 aa6.9□□□□□ -1.31
TDP1YBR223C HEM2P05373 342 aa6.9□□□□□ -1.31
TDP1YBR223C TPK2P06245 380 aa6.9□□□□□ -1.31
TDP1YBR223C SUI3P09064 285 aaKnown RBP6.9□□□□□ -1.31
TDP1YBR223C YSP3P25036 478 aa6.9□□□□□ -1.31
TDP1YBR223C RAD27P26793 382 aa6.9□□□□□ -1.31
TDP1YBR223C MET4P32389 672 aa6.9□□□□□ -1.31
TDP1YBR223C TOM20P35180 183 aa6.9□□□□□ -1.31
TDP1YBR223C SPC42P36094 363 aa6.9□□□□□ -1.31
TDP1YBR223C ECM4P36156 370 aa6.9□□□□□ -1.31
TDP1YBR223C MAK5P38112 773 aaPredicted RBP6.9□□□□□ -1.31
TDP1YBR223C YBL029WP38201 376 aa6.9□□□□□ -1.31
TDP1YBR223C FHL1P39521 936 aa6.9□□□□□ -1.31
TDP1YBR223C HAT2P39984 401 aa6.9□□□□□ -1.31
TDP1YBR223C DLD2P46681 530 aaKnown RBP6.9□□□□□ -1.31
TDP1YBR223C SNG1P46950 547 aa6.9□□□□□ -1.31
TDP1YBR223C RTT101P47050 842 aa6.9□□□□□ -1.31
TDP1YBR223C GPI1P53306 609 aa6.9□□□□□ -1.31
TDP1YBR223C EFM6P53970 246 aa6.9□□□□□ -1.31
TDP1YBR223C TMA20P89886 181 aaPredicted RBP6.9□□□□□ -1.31
TDP1YBR223C PET117Q02771 107 aa6.9□□□□□ -1.31
TDP1YBR223C NHP10Q03435 203 aa6.9□□□□□ -1.31
TDP1YBR223C HSP31Q04432 237 aa6.9□□□□□ -1.31
TDP1YBR223C GMC2Q06201 188 aa6.9□□□□□ -1.31
TDP1YBR223C CDA1Q06702 301 aa6.9□□□□□ -1.31
TDP1YBR223C LDB18Q07887 179 aa6.9□□□□□ -1.31
TDP1YBR223C SGT1Q08446 395 aa6.9□□□□□ -1.31
TDP1YBR223C LDB19Q12502 818 aa6.9□□□□□ -1.31
TDP1YBR223C KGD2P19262 463 aaPredicted RBP6.89□□□□□ -1.31
TDP1YBR223C BIO2P32451 375 aa6.89□□□□□ -1.31
TDP1YBR223C KAP104P38217 918 aaKnown RBP6.89□□□□□ -1.31
TDP1YBR223C TDP1P38319 544 aa6.89□□□□□ -1.31
TDP1YBR223C YHL041WP38730 149 aa6.89□□□□□ -1.31
TDP1YBR223C UBP7P40453 1071 aa6.89□□□□□ -1.31
TDP1YBR223C CAB2P40506 365 aa6.89□□□□□ -1.31
TDP1YBR223C GCN20P43535 752 aaKnown RBP6.89□□□□□ -1.31
TDP1YBR223C PRY3P47033 881 aa6.89□□□□□ -1.31
TDP1YBR223C GTR2P53290 341 aa6.89□□□□□ -1.31
TDP1YBR223C YMR226CQ05016 267 aaKnown RBP6.89□□□□□ -1.31
TDP1YBR223C NSE1Q07913 336 aa6.89□□□□□ -1.31
TDP1YBR223C YOL019WQ08157 551 aa6.89□□□□□ -1.31
TDP1YBR223C ULA1Q12059 462 aa6.89□□□□□ -1.31
TDP1YBR223C MAM3Q12296 706 aa6.89□□□□□ -1.31
TDP1YBR223C SAS5Q99314 248 aa6.89□□□□□ -1.31
TDP1YBR223C ATP6P00854 259 aa6.88□□□□□ -1.31
TDP1YBR223C MSS18P08593 268 aa6.88□□□□□ -1.31
TDP1YBR223C SBP1P10080 294 aaKnown RBP6.88□□□□□ -1.31
TDP1YBR223C ACO1P19414 778 aaKnown RBP RIP-Chip data6.88□□□□□ -1.31not detected
TDP1YBR223C CCA1P21269 546 aa6.88□□□□□ -1.31
TDP1YBR223C CDC3P32457 520 aaKnown RBP6.88□□□□□ -1.31
TDP1YBR223C PAH1P32567 862 aa6.88□□□□□ -1.31
TDP1YBR223C DSS4P32601 143 aa6.88□□□□□ -1.31
TDP1YBR223C ADD66P36040 267 aa6.88□□□□□ -1.31
TDP1YBR223C NUP60P39705 539 aa6.88□□□□□ -1.31
TDP1YBR223C PSF2P40359 213 aa6.88□□□□□ -1.31
TDP1YBR223C COA1P40452 197 aa6.88□□□□□ -1.31
TDP1YBR223C BNA3P47039 444 aaKnown RBP6.88□□□□□ -1.31
TDP1YBR223C DAN4P47179 1161 aa6.88□□□□□ -1.31
TDP1YBR223C IMA1P53051 589 aa6.88□□□□□ -1.31
TDP1YBR223C BOL2P53082 120 aa6.88□□□□□ -1.31
TDP1YBR223C EFM5P53200 248 aaKnown RBP6.88□□□□□ -1.31
TDP1YBR223C CEG1Q01159 459 aaPredicted RBP6.88□□□□□ -1.31
TDP1YBR223C NUP100Q02629 959 aa6.88□□□□□ -1.31
TDP1YBR223C TAF12Q03761 539 aa6.88□□□□□ -1.31
TDP1YBR223C YDR131CQ03899 556 aa6.88□□□□□ -1.31
TDP1YBR223C GGA1Q06336 557 aa6.88□□□□□ -1.31
TDP1YBR223C PSY3Q12318 242 aa6.88□□□□□ -1.31
TDP1YBR223C TOM1Q03280 3268 aa6.88□□□□□ -1.31
TDP1YBR223C ABF1P14164 731 aa6.87□□□□□ -1.31
TDP1YBR223C RVS161P25343 265 aaKnown RBP6.87□□□□□ -1.31
TDP1YBR223C PHO87P25360 923 aa6.87□□□□□ -1.31
TDP1YBR223C BUB2P26448 306 aaPredicted RBP6.87□□□□□ -1.31
TDP1YBR223C RAD16P31244 790 aa6.87□□□□□ -1.31
TDP1YBR223C PTM1P32857 523 aa6.87□□□□□ -1.31
TDP1YBR223C UGP1P32861 499 aaKnown RBP6.87□□□□□ -1.31
TDP1YBR223C BCK2P33306 851 aa6.87□□□□□ -1.31
TDP1YBR223C PEX6P33760 1030 aa6.87□□□□□ -1.31
TDP1YBR223C GRS1P38088 690 aaKnown RBP6.87□□□□□ -1.31
Retrieved 100 of 5,963 RNA–protein pairs in 31.7 ms