RNA–Protein interactions for RNA: YBR009C

HHF1, Transcript of Histone H4, yeastyeast

Gene HHF1, Length 312 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HHF1YBR009C MTG1Q03151 367 aaPredicted RBP3.41□□□□□ -1.86
HHF1YBR009C YDR239CQ03780 787 aa3.41□□□□□ -1.86
HHF1YBR009C HOF1Q05080 669 aa3.41□□□□□ -1.86
HHF1YBR009C DON1Q05610 365 aa3.41□□□□□ -1.86
HHF1YBR009C HRP1Q99383 534 aaKnown RBP3.41□□□□□ -1.86
HHF1YBR009C TPK2P06245 380 aa3.4□□□□□ -1.87
HHF1YBR009C RPL1AP0CX43 217 aaKnown RBP3.4□□□□□ -1.87
HHF1YBR009C RPL1BP0CX44 217 aaKnown RBP3.4□□□□□ -1.87
HHF1YBR009C DAP2P18962 818 aa3.4□□□□□ -1.87
HHF1YBR009C VPS33P20795 691 aa3.4□□□□□ -1.87
HHF1YBR009C SEC15P22224 910 aa3.4□□□□□ -1.87
HHF1YBR009C APN1P22936 367 aa3.4□□□□□ -1.87
HHF1YBR009C DAL80P26343 269 aa3.4□□□□□ -1.87
HHF1YBR009C URK1P27515 501 aa3.4□□□□□ -1.87
HHF1YBR009C SYN8P31377 255 aa3.4□□□□□ -1.87
HHF1YBR009C DCG1P32460 244 aa3.4□□□□□ -1.87
HHF1YBR009C SSE1P32589 693 aaKnown RBP3.4□□□□□ -1.87
HHF1YBR009C PMT1P33775 817 aa3.4□□□□□ -1.87
HHF1YBR009C THI2P38141 450 aa3.4□□□□□ -1.87
HHF1YBR009C YSW1P38280 609 aa3.4□□□□□ -1.87
HHF1YBR009C RRT2P38332 387 aa3.4□□□□□ -1.87
HHF1YBR009C OTU2P38747 307 aaKnown RBP3.4□□□□□ -1.87
HHF1YBR009C ERC1P38767 581 aa3.4□□□□□ -1.87
HHF1YBR009C PTC7P38797 343 aa3.4□□□□□ -1.87
HHF1YBR009C YHR131CP38835 850 aa3.4□□□□□ -1.87
HHF1YBR009C SEC24P40482 926 aaKnown RBP3.4□□□□□ -1.87
HHF1YBR009C PET130P47065 347 aa3.4□□□□□ -1.87
HHF1YBR009C YGR111WP53265 400 aa3.4□□□□□ -1.87
HHF1YBR009C TEX1P53851 422 aaKnown RBP3.4□□□□□ -1.87
HHF1YBR009C PDR16P53860 351 aaKnown RBP3.4□□□□□ -1.87
HHF1YBR009C SSY1Q03770 852 aa3.4□□□□□ -1.87
HHF1YBR009C RPC11Q04307 110 aaPredicted RBP3.4□□□□□ -1.87
HHF1YBR009C SOV1Q04748 898 aa3.4□□□□□ -1.87
HHF1YBR009C CRF1Q04930 467 aa3.4□□□□□ -1.87
HHF1YBR009C RQC1Q05468 723 aaKnown RBP3.4□□□□□ -1.87
HHF1YBR009C VPS38Q05919 439 aa3.4□□□□□ -1.87
HHF1YBR009C DBP9Q06218 594 aaKnown RBP3.4□□□□□ -1.87
HHF1YBR009C CHS5Q12114 671 aaKnown RBP3.4□□□□□ -1.87
HHF1YBR009C SWM1Q12379 170 aa3.4□□□□□ -1.87
HHF1YBR009C GAL80P04387 435 aa3.39□□□□□ -1.87
HHF1YBR009C GRR1P24814 1151 aa3.39□□□□□ -1.87
HHF1YBR009C BUD14P27637 709 aa3.39□□□□□ -1.87
HHF1YBR009C VPS17P32913 551 aa3.39□□□□□ -1.87
HHF1YBR009C LTV1P34078 463 aa3.39□□□□□ -1.87
HHF1YBR009C SEF1P34228 1148 aa3.39□□□□□ -1.87
HHF1YBR009C COS111P38308 924 aa3.39□□□□□ -1.87
HHF1YBR009C REV7P38927 245 aa3.39□□□□□ -1.87
HHF1YBR009C YJL193WP39542 402 aa3.39□□□□□ -1.87
HHF1YBR009C LRO1P40345 661 aa3.39□□□□□ -1.87
HHF1YBR009C YIL077CP40508 320 aa3.39□□□□□ -1.87
HHF1YBR009C URM1P40554 99 aaPredicted RBP3.39□□□□□ -1.87
HHF1YBR009C STU2P46675 888 aa3.39□□□□□ -1.87
HHF1YBR009C AIP1P46680 615 aaKnown RBP3.39□□□□□ -1.87
HHF1YBR009C DLD2P46681 530 aaKnown RBP3.39□□□□□ -1.87
HHF1YBR009C CTK2P46962 323 aa3.39□□□□□ -1.87
HHF1YBR009C ALT2P52892 507 aa3.39□□□□□ -1.87
HHF1YBR009C SHE10P53075 577 aa3.39□□□□□ -1.87
HHF1YBR009C KAP120Q02932 1032 aa3.39□□□□□ -1.87
HHF1YBR009C MGR3Q04472 501 aa3.39□□□□□ -1.87
HHF1YBR009C ARR3Q06598 404 aa3.39□□□□□ -1.87
HHF1YBR009C NOP6Q07623 225 aaKnown RBP3.39□□□□□ -1.87
HHF1YBR009C APL5Q08951 932 aaKnown RBP3.39□□□□□ -1.87
HHF1YBR009C YPL272CQ08984 517 aa3.39□□□□□ -1.87
HHF1YBR009C SWT1Q12104 458 aa3.39□□□□□ -1.87
HHF1YBR009C RTC5Q12108 567 aaKnown RBP3.39□□□□□ -1.87
HHF1YBR009C HER1Q12276 1246 aa3.39□□□□□ -1.87
HHF1YBR009C CHD1P32657 1468 aa3.39□□□□□ -1.87
HHF1YBR009C YBR085C-AO43137 85 aa3.38□□□□□ -1.87
HHF1YBR009C GAL10P04397 699 aa3.38□□□□□ -1.87
HHF1YBR009C ARD1P07347 238 aaPredicted RBP3.38□□□□□ -1.87
HHF1YBR009C YML003WP0CF16 290 aa3.38□□□□□ -1.87
HHF1YBR009C RPL3P14126 387 aaKnown RBP3.38□□□□□ -1.87
HHF1YBR009C EST1P17214 699 aaPredicted RBP3.38□□□□□ -1.87
HHF1YBR009C DBP3P20447 523 aaKnown RBP3.38□□□□□ -1.87
HHF1YBR009C YCR015CP25616 317 aa3.38□□□□□ -1.87
HHF1YBR009C YIH1P25637 258 aa3.38□□□□□ -1.87
HHF1YBR009C YCR061WP25639 631 aa3.38□□□□□ -1.87
HHF1YBR009C SRB5P32585 307 aa3.38□□□□□ -1.87
HHF1YBR009C DSS4P32601 143 aa3.38□□□□□ -1.87
HHF1YBR009C CMC1P36064 111 aa3.38□□□□□ -1.87
HHF1YBR009C VPS45P38932 577 aa3.38□□□□□ -1.87
HHF1YBR009C AFG3P39925 761 aa3.38□□□□□ -1.87
HHF1YBR009C TMN3P40071 706 aa3.38□□□□□ -1.87
HHF1YBR009C PKP1P40530 394 aa3.38□□□□□ -1.87
HHF1YBR009C MKT1P40850 830 aaKnown RBP3.38□□□□□ -1.87
HHF1YBR009C GCD10P41814 478 aa3.38□□□□□ -1.87
HHF1YBR009C CTR1P49573 406 aa3.38□□□□□ -1.87
HHF1YBR009C CUE3P53137 624 aaKnown RBP3.38□□□□□ -1.87
HHF1YBR009C TOF2Q02208 771 aa3.38□□□□□ -1.87
HHF1YBR009C NRG1Q03125 231 aa3.38□□□□□ -1.87
HHF1YBR009C BUD22Q04347 519 aaKnown RBP3.38□□□□□ -1.87
HHF1YBR009C RBA50Q04418 439 aa3.38□□□□□ -1.87
HHF1YBR009C RBS1Q05672 457 aaKnown RBP3.38□□□□□ -1.87
HHF1YBR009C TPO1Q07824 586 aa3.38□□□□□ -1.87
HHF1YBR009C DIA2Q08496 732 aaPredicted RBP3.38□□□□□ -1.87
HHF1YBR009C DCI1Q08558 271 aa3.38□□□□□ -1.87
HHF1YBR009C APC5Q08683 685 aa3.38□□□□□ -1.87
HHF1YBR009C AVL9Q12500 764 aa3.38□□□□□ -1.87
HHF1YBR009C PRE10P21242 288 aaKnown RBP RIP-Chip data3.37□□□□□ -1.87not detected
HHF1YBR009C VPS34P22543 875 aa3.37□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 10.6 ms