RNA–Protein interactions for RNA: YBL078C

ATG8, Transcript of Component of autophagosomes and Cvt vesicles, yeastyeast

Gene ATG8, Length 354 nt, Biotype protein coding, Subcellular localisation Peroxisome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG8YBL078C RIX7Q07844 837 aaKnown RBP4.52□□□□□ -1.69
ATG8YBL078C AIM41Q12032 185 aa4.52□□□□□ -1.69
ATG8YBL078C SWM1Q12379 170 aa4.52□□□□□ -1.69
ATG8YBL078C POM34Q12445 299 aa4.52□□□□□ -1.69
ATG8YBL078C HRP1Q99383 534 aaKnown RBP4.52□□□□□ -1.69
ATG8YBL078C YRF1-4O13559 1382 aa4.52□□□□□ -1.69
ATG8YBL078C RPP2AP05319 106 aaKnown RBP4.51□□□□□ -1.69
ATG8YBL078C STE12P13574 688 aa4.51□□□□□ -1.69
ATG8YBL078C THR1P17423 357 aaKnown RBP4.51□□□□□ -1.69
ATG8YBL078C HCM1P25364 564 aa4.51□□□□□ -1.69
ATG8YBL078C GCD7P32502 381 aaPredicted RBP4.51□□□□□ -1.69
ATG8YBL078C TRM2P33753 639 aa4.51□□□□□ -1.69
ATG8YBL078C APE3P37302 537 aaKnown RBP4.51□□□□□ -1.69
ATG8YBL078C REG2P38232 338 aa4.51□□□□□ -1.69
ATG8YBL078C SMF1P38925 575 aa4.51□□□□□ -1.69
ATG8YBL078C LYS9P38999 446 aa4.51□□□□□ -1.69
ATG8YBL078C ARB1P40024 610 aaKnown RBP4.51□□□□□ -1.69
ATG8YBL078C MET18P40469 1032 aa4.51□□□□□ -1.69
ATG8YBL078C DOT5P40553 215 aa4.51□□□□□ -1.69
ATG8YBL078C SSU1P41930 458 aa4.51□□□□□ -1.69
ATG8YBL078C ZIM17P42844 174 aa4.51□□□□□ -1.69
ATG8YBL078C MET12P46151 657 aa4.51□□□□□ -1.69
ATG8YBL078C YJL055WP47044 245 aa4.51□□□□□ -1.69
ATG8YBL078C MDE1P47095 244 aa4.51□□□□□ -1.69
ATG8YBL078C AAD10P47182 288 aa4.51□□□□□ -1.69
ATG8YBL078C GLO1P50107 326 aa4.51□□□□□ -1.69
ATG8YBL078C BNI5P53890 448 aaKnown RBP4.51□□□□□ -1.69
ATG8YBL078C INN1P53901 409 aa4.51□□□□□ -1.69
ATG8YBL078C VPS9P54787 451 aa4.51□□□□□ -1.69
ATG8YBL078C YPL108WQ02872 168 aaPredicted RBP4.51□□□□□ -1.69
ATG8YBL078C TAP42Q04372 366 aa4.51□□□□□ -1.69
ATG8YBL078C ECM22Q05958 814 aaPredicted RBP4.51□□□□□ -1.69
ATG8YBL078C TGL5Q12043 749 aa4.51□□□□□ -1.69
ATG8YBL078C LYS21Q12122 440 aaKnown RBP4.51□□□□□ -1.69
ATG8YBL078C FRE6Q12473 712 aa4.51□□□□□ -1.69
ATG8YBL078C PNO1Q99216 274 aaKnown RBP4.51□□□□□ -1.69
ATG8YBL078C VCX1Q99385 411 aa4.51□□□□□ -1.69
ATG8YBL078C PWP1P21304 576 aaKnown RBP4.5□□□□□ -1.69
ATG8YBL078C SEC15P22224 910 aa4.5□□□□□ -1.69
ATG8YBL078C CLB1P24868 471 aa4.5□□□□□ -1.69
ATG8YBL078C TDP1P38319 544 aa4.5□□□□□ -1.69
ATG8YBL078C RGI2P40188 164 aa4.5□□□□□ -1.69
ATG8YBL078C PFK26P40433 827 aaKnown RBP4.5□□□□□ -1.69
ATG8YBL078C URM1P40554 99 aaPredicted RBP4.5□□□□□ -1.69
ATG8YBL078C NNF2P53253 936 aa4.5□□□□□ -1.69
ATG8YBL078C OGG1P53397 376 aaPredicted RBP4.5□□□□□ -1.69
ATG8YBL078C TEX1P53851 422 aaKnown RBP4.5□□□□□ -1.69
ATG8YBL078C JJJ1P53863 590 aa4.5□□□□□ -1.69
ATG8YBL078C SEC5P89102 971 aa4.5□□□□□ -1.69
ATG8YBL078C NGL2Q03264 515 aaKnown RBP4.5□□□□□ -1.69
ATG8YBL078C HOF1Q05080 669 aa4.5□□□□□ -1.69
ATG8YBL078C RRP9Q06506 573 aaKnown RBP4.5□□□□□ -1.69
ATG8YBL078C KEL3Q08979 651 aaPredicted RBP4.5□□□□□ -1.69
ATG8YBL078C NUS1Q12063 375 aa4.5□□□□□ -1.69
ATG8YBL078C HIS5P07172 385 aa4.49□□□□□ -1.69
ATG8YBL078C SEC12P11655 471 aa4.49□□□□□ -1.69
ATG8YBL078C PRP45P28004 379 aaPredicted RBP4.49□□□□□ -1.69
ATG8YBL078C MAL33P38157 468 aa4.49□□□□□ -1.69
ATG8YBL078C RRF1P38771 230 aa4.49□□□□□ -1.69
ATG8YBL078C PLB1P39105 664 aa4.49□□□□□ -1.69
ATG8YBL078C ECM1P39715 212 aa4.49□□□□□ -1.69
ATG8YBL078C ASE1P50275 885 aa4.49□□□□□ -1.69
ATG8YBL078C COS12P53053 380 aa4.49□□□□□ -1.69
ATG8YBL078C MRPS35P53292 345 aa4.49□□□□□ -1.69
ATG8YBL078C HOT1Q03213 719 aa4.49□□□□□ -1.69
ATG8YBL078C RGC1Q06108 1083 aaKnown RBP4.49□□□□□ -1.69
ATG8YBL078C THI22Q06490 572 aa4.49□□□□□ -1.69
ATG8YBL078C RIM20Q12033 661 aa4.49□□□□□ -1.69
ATG8YBL078C REX3Q12090 404 aa4.49□□□□□ -1.69
ATG8YBL078C NTO1Q12311 748 aa4.49□□□□□ -1.69
ATG8YBL078C SPE4Q12455 300 aa4.49□□□□□ -1.69
ATG8YBL078C CET1O13297 549 aaPredicted RBP4.48□□□□□ -1.69
ATG8YBL078C TUF1P02992 437 aaKnown RBP4.48□□□□□ -1.69
ATG8YBL078C VMA2P16140 517 aaKnown RBP4.48□□□□□ -1.69
ATG8YBL078C CLB3P24870 427 aa4.48□□□□□ -1.69
ATG8YBL078C MGM1P32266 881 aa4.48□□□□□ -1.69
ATG8YBL078C RPN2P32565 945 aaKnown RBP4.48□□□□□ -1.69
ATG8YBL078C UBP11P36026 717 aa4.48□□□□□ -1.69
ATG8YBL078C COS111P38308 924 aa4.48□□□□□ -1.69
ATG8YBL078C TMN3P40071 706 aa4.48□□□□□ -1.69
ATG8YBL078C SLZ1P40167 298 aa4.48□□□□□ -1.69
ATG8YBL078C YIL077CP40508 320 aa4.48□□□□□ -1.69
ATG8YBL078C EFM4P40516 257 aa4.48□□□□□ -1.69
ATG8YBL078C SGN1P40561 250 aaKnown RBP RIP-Chip data4.48□□□□□ -1.69not detected
ATG8YBL078C THI6P41835 540 aa4.48□□□□□ -1.69
ATG8YBL078C SKP2P42843 763 aa4.48□□□□□ -1.69
ATG8YBL078C IDS2P46958 469 aa4.48□□□□□ -1.69
ATG8YBL078C LYS4P49367 693 aaPredicted RBP4.48□□□□□ -1.69
ATG8YBL078C MTL1P53214 551 aa4.48□□□□□ -1.69
ATG8YBL078C NCS2P53923 493 aaPredicted RBP4.48□□□□□ -1.69
ATG8YBL078C SLU7Q02775 382 aaKnown RBP4.48□□□□□ -1.69
ATG8YBL078C YPL107WQ02873 248 aa4.48□□□□□ -1.69
ATG8YBL078C NRG1Q03125 231 aa4.48□□□□□ -1.69
ATG8YBL078C MUB1Q03162 620 aa4.48□□□□□ -1.69
ATG8YBL078C GAD1Q04792 585 aa4.48□□□□□ -1.69
ATG8YBL078C RSF1Q05043 376 aa4.48□□□□□ -1.69
ATG8YBL078C FMP45Q07651 309 aa4.48□□□□□ -1.69
ATG8YBL078C ERG27Q12452 347 aaKnown RBP4.48□□□□□ -1.69
ATG8YBL078C YOR019WQ99248 730 aa4.48□□□□□ -1.69
ATG8YBL078C VPS33P20795 691 aa4.47□□□□□ -1.69
Retrieved 100 of 5,963 RNA–protein pairs in 18.5 ms