RNA–Protein interactions for RNA: YAL030W

SNC1, Transcript of Vesicle membrane receptor protein (v-SNARE), yeastyeast

Gene SNC1, Length 354 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytosol, Endoplasmic reticulum, Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNC1YAL030W ACF2Q12168 779 aa2.28□□□□□ -2.04
SNC1YAL030W MDM20Q12387 796 aaKnown RBP2.28□□□□□ -2.04
SNC1YAL030W YOR019WQ99248 730 aa2.28□□□□□ -2.04
SNC1YAL030W RPL7AP05737 244 aaKnown RBP2.27□□□□□ -2.05
SNC1YAL030W SES1P07284 462 aaKnown RBP2.27□□□□□ -2.05
SNC1YAL030W PDX1P16451 410 aa2.27□□□□□ -2.05
SNC1YAL030W PMA2P19657 947 aa2.27□□□□□ -2.05
SNC1YAL030W SRP54P20424 541 aaKnown RBP2.27□□□□□ -2.05
SNC1YAL030W DMC1P25453 334 aa2.27□□□□□ -2.05
SNC1YAL030W YIH1P25637 258 aa2.27□□□□□ -2.05
SNC1YAL030W RFA2P26754 273 aaKnown RBP2.27□□□□□ -2.05
SNC1YAL030W PXA2P34230 853 aa2.27□□□□□ -2.05
SNC1YAL030W UBP11P36026 717 aa2.27□□□□□ -2.05
SNC1YAL030W BYE1P36106 594 aa2.27□□□□□ -2.05
SNC1YAL030W AUR1P36107 401 aaPredicted RBP2.27□□□□□ -2.05
SNC1YAL030W YMC2P38087 329 aa2.27□□□□□ -2.05
SNC1YAL030W MAL33P38157 468 aa2.27□□□□□ -2.05
SNC1YAL030W DIA4P38705 446 aaPredicted RBP2.27□□□□□ -2.05
SNC1YAL030W CCT6P39079 546 aa2.27□□□□□ -2.05
SNC1YAL030W UIP3P39547 235 aa2.27□□□□□ -2.05
SNC1YAL030W JHD1P40034 492 aa2.27□□□□□ -2.05
SNC1YAL030W MET18P40469 1032 aa2.27□□□□□ -2.05
SNC1YAL030W SDS3P40505 327 aa2.27□□□□□ -2.05
SNC1YAL030W GPD2P41911 440 aaKnown RBP2.27□□□□□ -2.05
SNC1YAL030W TDA10P42938 290 aa2.27□□□□□ -2.05
SNC1YAL030W SWP82P43554 623 aa2.27□□□□□ -2.05
SNC1YAL030W ROK1P45818 564 aaPredicted RBP2.27□□□□□ -2.05
SNC1YAL030W UBX6P47049 396 aa2.27□□□□□ -2.05
SNC1YAL030W NPA3P47122 385 aa2.27□□□□□ -2.05
SNC1YAL030W YGL117WP53133 265 aa2.27□□□□□ -2.05
SNC1YAL030W JJJ1P53863 590 aa2.27□□□□□ -2.05
SNC1YAL030W UBP16Q02863 499 aa2.27□□□□□ -2.05
SNC1YAL030W RAD33Q04231 177 aa2.27□□□□□ -2.05
SNC1YAL030W CRN1Q06440 651 aa2.27□□□□□ -2.05
SNC1YAL030W SWA2Q06677 668 aa2.27□□□□□ -2.05
SNC1YAL030W YEH1Q07804 573 aa2.27□□□□□ -2.05
SNC1YAL030W ETT1Q08421 412 aaKnown RBP2.27□□□□□ -2.05
SNC1YAL030W PCL8Q08966 492 aa2.27□□□□□ -2.05
SNC1YAL030W LYS21Q12122 440 aaKnown RBP2.27□□□□□ -2.05
SNC1YAL030W RRG1Q12167 365 aaPredicted RBP2.27□□□□□ -2.05
SNC1YAL030W RPL7BQ12213 244 aaKnown RBP2.27□□□□□ -2.05
SNC1YAL030W GRX6Q12438 231 aa2.27□□□□□ -2.05
SNC1YAL030W SPE4Q12455 300 aa2.27□□□□□ -2.05
SNC1YAL030W COX1P00401 534 aa2.26□□□□□ -2.05
SNC1YAL030W HXK2P04807 486 aaKnown RBP2.26□□□□□ -2.05
SNC1YAL030W MET17P06106 444 aa2.26□□□□□ -2.05
SNC1YAL030W VMA16P23968 213 aa2.26□□□□□ -2.05
SNC1YAL030W RRP43P25359 394 aaPredicted RBP2.26□□□□□ -2.05
SNC1YAL030W ADH7P25377 361 aa2.26□□□□□ -2.05
SNC1YAL030W PEP3P27801 918 aa2.26□□□□□ -2.05
SNC1YAL030W YJU2P28320 278 aaPredicted RBP2.26□□□□□ -2.05
SNC1YAL030W ORC2P32833 620 aa2.26□□□□□ -2.05
SNC1YAL030W SOF1P33750 489 aaKnown RBP2.26□□□□□ -2.05
SNC1YAL030W SRO77P38163 1010 aa2.26□□□□□ -2.05
SNC1YAL030W REG2P38232 338 aa2.26□□□□□ -2.05
SNC1YAL030W SRP72P38688 640 aaKnown RBP2.26□□□□□ -2.05
SNC1YAL030W MTG2P38860 518 aa2.26□□□□□ -2.05
SNC1YAL030W GIP4P39732 760 aa2.26□□□□□ -2.05
SNC1YAL030W SAP1P39955 897 aaKnown RBP2.26□□□□□ -2.05
SNC1YAL030W MRX1P40050 688 aa2.26□□□□□ -2.05
SNC1YAL030W ASG1P40467 964 aa2.26□□□□□ -2.05
SNC1YAL030W PKP1P40530 394 aa2.26□□□□□ -2.05
SNC1YAL030W YFL015CP43578 164 aa2.26□□□□□ -2.05
SNC1YAL030W CTK2P46962 323 aa2.26□□□□□ -2.05
SNC1YAL030W VID30P53076 958 aa2.26□□□□□ -2.05
SNC1YAL030W YGL036WP53185 909 aaPredicted RBP2.26□□□□□ -2.05
SNC1YAL030W RSC1P53236 928 aa2.26□□□□□ -2.05
SNC1YAL030W YGR250CP53316 781 aaKnown RBP2.26□□□□□ -2.05
SNC1YAL030W SUN4P53616 420 aa2.26□□□□□ -2.05
SNC1YAL030W YNL058CP53947 316 aa2.26□□□□□ -2.05
SNC1YAL030W BOP3P53958 396 aa2.26□□□□□ -2.05
SNC1YAL030W ADE16P54113 591 aaKnown RBP2.26□□□□□ -2.05
SNC1YAL030W AAT1Q01802 451 aa2.26□□□□□ -2.05
SNC1YAL030W MUK1Q02866 612 aa2.26□□□□□ -2.05
SNC1YAL030W WAR1Q03631 944 aa2.26□□□□□ -2.05
SNC1YAL030W YML037CQ03703 340 aa2.26□□□□□ -2.05
SNC1YAL030W RCF1Q03713 159 aa2.26□□□□□ -2.05
SNC1YAL030W FIN1Q03898 291 aa2.26□□□□□ -2.05
SNC1YAL030W YML053CQ04978 212 aa2.26□□□□□ -2.05
SNC1YAL030W HRD3Q05787 833 aa2.26□□□□□ -2.05
SNC1YAL030W YLR352WQ06479 807 aa2.26□□□□□ -2.05
SNC1YAL030W RAD34Q06665 692 aa2.26□□□□□ -2.05
SNC1YAL030W GRC3Q07845 632 aa2.26□□□□□ -2.05
SNC1YAL030W FMP40Q08968 688 aaPredicted RBP2.26□□□□□ -2.05
SNC1YAL030W PUS9Q12069 462 aa2.26□□□□□ -2.05
SNC1YAL030W GET3Q12154 354 aaKnown RBP2.26□□□□□ -2.05
SNC1YAL030W YPT6Q99260 215 aa2.26□□□□□ -2.05
SNC1YAL030W AI5_ALPHAQ9ZZX1 630 aa2.26□□□□□ -2.05
SNC1YAL030W ARD1P07347 238 aaPredicted RBP2.25□□□□□ -2.05
SNC1YAL030W HOM3P10869 527 aa2.25□□□□□ -2.05
SNC1YAL030W POL4P25615 582 aa2.25□□□□□ -2.05
SNC1YAL030W MRPL9P31334 269 aa2.25□□□□□ -2.05
SNC1YAL030W DBF4P32325 704 aa2.25□□□□□ -2.05
SNC1YAL030W MTH1P35198 433 aa2.25□□□□□ -2.05
SNC1YAL030W OAR1P35731 278 aa2.25□□□□□ -2.05
SNC1YAL030W LHS1P36016 881 aa2.25□□□□□ -2.05
SNC1YAL030W SNU114P36048 1008 aaKnown RBP2.25□□□□□ -2.05
SNC1YAL030W CST26P38226 397 aa2.25□□□□□ -2.05
SNC1YAL030W VID24P38263 362 aa2.25□□□□□ -2.05
SNC1YAL030W LRP1P38801 184 aaKnown RBP2.25□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 53.7 ms