RNA–Protein interactions for RNA: LSR1

LSR1, Transcript of U2 spliceosomal RNA (U2 snRNA), component of the spliceosome, yeastyeast

Gene LSR1, Length 1,175 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSR1LSR1 RCR2Q03446 210 aaKnown RBP8.71□□□□□ -1.02
LSR1LSR1 SPG3Q04398 127 aaPredicted RBP8.71□□□□□ -1.02
LSR1LSR1 SEC10Q06245 871 aa8.71□□□□□ -1.02
LSR1LSR1 GGA1Q06336 557 aa8.71□□□□□ -1.02
LSR1LSR1 GPM2Q12008 311 aa8.71□□□□□ -1.02
LSR1LSR1 COX6P00427 148 aa8.7□□□□□ -1.02
LSR1LSR1 PAH1P32567 862 aa8.7□□□□□ -1.02
LSR1LSR1 NPL6P32832 435 aa8.7□□□□□ -1.02
LSR1LSR1 CSE1P33307 960 aa8.7□□□□□ -1.02
LSR1LSR1 RIM11P38615 370 aa8.7□□□□□ -1.02
LSR1LSR1 NUP60P39705 539 aa8.7□□□□□ -1.02
LSR1LSR1 IES5P40060 125 aa8.7□□□□□ -1.02
LSR1LSR1 ELO3P40319 345 aa8.7□□□□□ -1.02
LSR1LSR1 AIM20P40451 204 aa8.7□□□□□ -1.02
LSR1LSR1 COA1P40452 197 aa8.7□□□□□ -1.02
LSR1LSR1 GET1P53192 235 aa8.7□□□□□ -1.02
LSR1LSR1 ARC35P53731 342 aaKnown RBP8.7□□□□□ -1.02
LSR1LSR1 SIW14P53965 281 aa8.7□□□□□ -1.02
LSR1LSR1 GAS3Q03655 524 aa8.7□□□□□ -1.02
LSR1LSR1 YOR342CQ12182 319 aa8.7□□□□□ -1.02
LSR1LSR1 ARP7Q12406 477 aa8.7□□□□□ -1.02
LSR1LSR1 NHA1Q99271 985 aa8.7□□□□□ -1.02
LSR1LSR1 CLB3P24870 427 aa8.69□□□□□ -1.02
LSR1LSR1 YCR090CP25654 182 aaKnown RBP8.69□□□□□ -1.02
LSR1LSR1 DAL1P32375 460 aa8.69□□□□□ -1.02
LSR1LSR1 BIO2P32451 375 aa8.69□□□□□ -1.02
LSR1LSR1 CSE2P33308 149 aa8.69□□□□□ -1.02
LSR1LSR1 MRP21P38175 177 aa8.69□□□□□ -1.02
LSR1LSR1 UTP9P38882 575 aaKnown RBP8.69□□□□□ -1.02
LSR1LSR1 TVP23P38962 199 aa8.69□□□□□ -1.02
LSR1LSR1 ECM10P39987 644 aa8.69□□□□□ -1.02
LSR1LSR1 ARB1P40024 610 aaKnown RBP8.69□□□□□ -1.02
LSR1LSR1 RSC8P43609 557 aaKnown RBP8.69□□□□□ -1.02
LSR1LSR1 MRK1P50873 501 aa8.69□□□□□ -1.02
LSR1LSR1 SHE4P51534 789 aa8.69□□□□□ -1.02
LSR1LSR1 IMA1P53051 589 aa8.69□□□□□ -1.02
LSR1LSR1 BRE5P53741 515 aaKnown RBP8.69□□□□□ -1.02
LSR1LSR1 LSM3P57743 89 aaKnown RBP8.69□□□□□ -1.02
LSR1LSR1 CEG1Q01159 459 aaPredicted RBP8.69□□□□□ -1.02
LSR1LSR1 SKI8Q02793 397 aaPredicted RBP8.69□□□□□ -1.02
LSR1LSR1 TRS31Q03337 283 aa8.69□□□□□ -1.02
LSR1LSR1 YDR131CQ03899 556 aa8.69□□□□□ -1.02
LSR1LSR1 HPT1Q04178 221 aaKnown RBP8.69□□□□□ -1.02
LSR1LSR1 ECM30Q06673 1274 aa8.69□□□□□ -1.02
LSR1LSR1 LCB4Q12246 624 aa8.69□□□□□ -1.02
LSR1LSR1 CIT2P08679 460 aa8.68□□□□□ -1.02
LSR1LSR1 SBP1P10080 294 aaKnown RBP8.68□□□□□ -1.02
LSR1LSR1 SNF4P12904 322 aa8.68□□□□□ -1.02
LSR1LSR1 ACO1P19414 778 aaKnown RBP RIP-Chip data8.68□□□□□ -1.02not detected
LSR1LSR1 TRX2P22803 104 aaKnown RBP8.68□□□□□ -1.02
LSR1LSR1 CLB2P24869 491 aa8.68□□□□□ -1.02
LSR1LSR1 CSM1P25651 190 aa8.68□□□□□ -1.02
LSR1LSR1 RAD27P26793 382 aa8.68□□□□□ -1.02
LSR1LSR1 PHO91P27514 894 aa8.68□□□□□ -1.02
LSR1LSR1 BEM1P29366 551 aa8.68□□□□□ -1.02
LSR1LSR1 CDC3P32457 520 aaKnown RBP8.68□□□□□ -1.02
LSR1LSR1 KAR9P32526 644 aa8.68□□□□□ -1.02
LSR1LSR1 MRS6P32864 603 aaKnown RBP8.68□□□□□ -1.02
LSR1LSR1 TYE7P33122 291 aaPredicted RBP8.68□□□□□ -1.02
LSR1LSR1 BUD2P33314 1104 aa8.68□□□□□ -1.02
LSR1LSR1 TIF3P34167 436 aaKnown RBP8.68□□□□□ -1.02
LSR1LSR1 YBR284WP38150 797 aa8.68□□□□□ -1.02
LSR1LSR1 FUI1P38196 639 aa8.68□□□□□ -1.02
LSR1LSR1 UBP7P40453 1071 aa8.68□□□□□ -1.02
LSR1LSR1 YIR007WP40566 764 aa8.68□□□□□ -1.02
LSR1LSR1 VMA13P41807 478 aaKnown RBP8.68□□□□□ -1.02
LSR1LSR1 ROK1P45818 564 aaPredicted RBP8.68□□□□□ -1.02
LSR1LSR1 YJR154WP47181 346 aa8.68□□□□□ -1.02
LSR1LSR1 HSP31Q04432 237 aa8.68□□□□□ -1.02
LSR1LSR1 YLR225CQ05948 407 aaKnown RBP8.68□□□□□ -1.02
LSR1LSR1 ICL2Q12031 575 aa8.68□□□□□ -1.02
LSR1LSR1 MDY2Q12285 212 aa8.68□□□□□ -1.02
LSR1LSR1 LDB19Q12502 818 aa8.68□□□□□ -1.02
LSR1LSR1 HIS1P00498 297 aaKnown RBP8.67□□□□□ -1.02
LSR1LSR1 UGA1P17649 471 aa8.67□□□□□ -1.02
LSR1LSR1 CNA1P23287 553 aa8.67□□□□□ -1.02
LSR1LSR1 DBR1P24309 405 aaKnown RBP8.67□□□□□ -1.02
LSR1LSR1 DPB2P24482 689 aaPredicted RBP8.67□□□□□ -1.02
LSR1LSR1 YSP3P25036 478 aa8.67□□□□□ -1.02
LSR1LSR1 DSS4P32601 143 aa8.67□□□□□ -1.02
LSR1LSR1 UGP1P32861 499 aaKnown RBP8.67□□□□□ -1.02
LSR1LSR1 SEC66P33754 206 aa8.67□□□□□ -1.02
LSR1LSR1 MUP3P38734 546 aa8.67□□□□□ -1.02
LSR1LSR1 YHR131CP38835 850 aa8.67□□□□□ -1.02
LSR1LSR1 KTR7P40504 517 aa8.67□□□□□ -1.02
LSR1LSR1 VHR1P40522 640 aa8.67□□□□□ -1.02
LSR1LSR1 CNN1P43618 361 aa8.67□□□□□ -1.02
LSR1LSR1 DLD2P46681 530 aaKnown RBP8.67□□□□□ -1.02
LSR1LSR1 PEX8P53248 589 aa8.67□□□□□ -1.02
LSR1LSR1 NOP19P53317 196 aaPredicted RBP8.67□□□□□ -1.02
LSR1LSR1 RMI1Q02685 241 aa8.67□□□□□ -1.02
LSR1LSR1 HEL2Q05580 639 aaKnown RBP8.67□□□□□ -1.02
LSR1LSR1 YLR413WQ06689 675 aa8.67□□□□□ -1.02
LSR1LSR1 NSL1Q12143 216 aa8.67□□□□□ -1.02
LSR1LSR1 UBX3Q12229 455 aa8.67□□□□□ -1.02
LSR1LSR1 ATG34Q12292 412 aa8.67□□□□□ -1.02
LSR1LSR1 AFI1Q99222 893 aa8.67□□□□□ -1.02
LSR1LSR1 NMT1P14743 455 aa8.66□□□□□ -1.02
LSR1LSR1 ART10P18634 518 aaKnown RBP8.66□□□□□ -1.02
LSR1LSR1 ATP7P30902 174 aa8.66□□□□□ -1.02
Retrieved 100 of 5,963 RNA–protein pairs in 13.3 ms