RNA–Protein interactions for RNA: ENST00000641991.1

CASC19-272, Transcript of cancer susceptibility 19, humanhuman

Gene CASC19, Length 1,360 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-272ENST00000641991 ABCB5Q2M3G0 1257 aa13.39□□□□□ -0.27
CASC19-272ENST00000641991 C9orf131Q5VYM1 1079 aa13.39□□□□□ -0.27
CASC19-272ENST00000641991 KRT40Q6A162 431 aa13.39□□□□□ -0.27
CASC19-272ENST00000641991 LRRC47Q8N1G4 583 aaKnown RBP13.39□□□□□ -0.27
CASC19-272ENST00000641991 STAG2Q8N3U4 1231 aa13.39□□□□□ -0.27
CASC19-272ENST00000641991 CCDC82Q8N4S0 544 aa13.39□□□□□ -0.27
CASC19-272ENST00000641991 TRPM4Q8TD43 1214 aa13.39□□□□□ -0.27
CASC19-272ENST00000641991 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.39□□□□□ -0.27
CASC19-272ENST00000641991 LMBRD1Q9NUN5 540 aa13.39□□□□□ -0.27
CASC19-272ENST00000641991 CNPY2Q9Y2B0 182 aa13.39□□□□□ -0.27
CASC19-272ENST00000641991 PDHBP11177 359 aa13.38□□□□□ -0.27
CASC19-272ENST00000641991 KIF23Q02241 960 aaPredicted RBP13.38□□□□□ -0.27
CASC19-272ENST00000641991 SEPT2Q15019 361 aa13.38□□□□□ -0.27
CASC19-272ENST00000641991 FAM173BQ6P4H8 233 aa13.38□□□□□ -0.27
CASC19-272ENST00000641991 SIAH1Q8IUQ4 282 aa13.38□□□□□ -0.27
CASC19-272ENST00000641991 SHISA4Q96DD7 197 aa13.38□□□□□ -0.27
CASC19-272ENST00000641991 LZTS2Q9BRK4 669 aa13.38□□□□□ -0.27
CASC19-272ENST00000641991 KANSL2Q9H9L4 492 aa13.38□□□□□ -0.27
CASC19-272ENST00000641991 NYAP2Q9P242 653 aa13.38□□□□□ -0.27
CASC19-272ENST00000641991 CLIP2Q9UDT6 1046 aa13.38□□□□□ -0.27
CASC19-272ENST00000641991 HACL1Q9UJ83 578 aa13.38□□□□□ -0.27
CASC19-272ENST00000641991 SBF1O95248 1867 aa13.38□□□□□ -0.27
CASC19-272ENST00000641991 GOLGB1Q14789 3259 aaKnown RBP13.38□□□□□ -0.27
CASC19-272ENST00000641991 USP17L5A8MUK1 530 aa13.37□□□□□ -0.27
CASC19-272ENST00000641991 GDF11O95390 407 aa13.37□□□□□ -0.27
CASC19-272ENST00000641991 GH2P01242 217 aa13.37□□□□□ -0.27
CASC19-272ENST00000641991 PARP1P09874 1014 aaKnown RBP13.37□□□□□ -0.27
CASC19-272ENST00000641991 EPS15P42566 896 aa13.37□□□□□ -0.27
CASC19-272ENST00000641991 ICA1Q05084 483 aa13.37□□□□□ -0.27
CASC19-272ENST00000641991 MKL1Q969V6 931 aa13.37□□□□□ -0.27
CASC19-272ENST00000641991 SPZ1Q9BXG8 430 aa13.37□□□□□ -0.27
CASC19-272ENST00000641991 RBM27Q9P2N5 1060 aaKnown RBP13.37□□□□□ -0.27
CASC19-272ENST00000641991 V9GY48 417 aaPredicted RBP13.37□□□□□ -0.27
CASC19-272ENST00000641991 KIF28PB7ZC32 967 aa13.36□□□□□ -0.27
CASC19-272ENST00000641991 TRAK2O60296 914 aa13.36□□□□□ -0.27
CASC19-272ENST00000641991 PRPF40AO75400 957 aaKnown RBP13.36□□□□□ -0.27
CASC19-272ENST00000641991 DDNO94850 711 aaPredicted RBP13.36□□□□□ -0.27
CASC19-272ENST00000641991 EEF2P13639 858 aaKnown RBP13.36□□□□□ -0.27
CASC19-272ENST00000641991 HIRAP54198 1017 aaPredicted RBP13.36□□□□□ -0.27
CASC19-272ENST00000641991 AKAP17AQ02040 695 aaKnown RBP13.36□□□□□ -0.27
CASC19-272ENST00000641991 TRIM29Q14134 588 aa13.36□□□□□ -0.27
CASC19-272ENST00000641991 ASPRV1Q53RT3 343 aa13.36□□□□□ -0.27
CASC19-272ENST00000641991 USP17L2Q6R6M4 530 aa13.36□□□□□ -0.27
CASC19-272ENST00000641991 BRAPQ7Z569 592 aa13.36□□□□□ -0.27
CASC19-272ENST00000641991 APOBEC3FQ8IUX4 373 aaKnown RBP13.36□□□□□ -0.27
CASC19-272ENST00000641991 GDPD2Q9HCC8 539 aa13.36□□□□□ -0.27
CASC19-272ENST00000641991 SCAF8Q9UPN6 1271 aaKnown RBP13.36□□□□□ -0.27
CASC19-272ENST00000641991 MTMR7Q9Y216 660 aa13.36□□□□□ -0.27
CASC19-272ENST00000641991 hCG_1642624A0A1W2PR95 340 aa13.35□□□□□ -0.27
CASC19-272ENST00000641991 KLRF2D3W0D1 207 aa13.35□□□□□ -0.27
CASC19-272ENST00000641991 FIBPO43427 364 aa13.35□□□□□ -0.27
CASC19-272ENST00000641991 CYTH3O43739 400 aa13.35□□□□□ -0.27
CASC19-272ENST00000641991 MMP1P03956 469 aa13.35□□□□□ -0.27
CASC19-272ENST00000641991 GOLGA8HP0CJ92 632 aa13.35□□□□□ -0.27
CASC19-272ENST00000641991 SCG2P13521 617 aa13.35□□□□□ -0.27
CASC19-272ENST00000641991 NCLP19338 710 aaKnown RBP13.35□□□□□ -0.27
CASC19-272ENST00000641991 SMARCA1P28370 1054 aa13.35□□□□□ -0.27
CASC19-272ENST00000641991 KRT85P78386 507 aa13.35□□□□□ -0.27
CASC19-272ENST00000641991 ZNF543Q08ER8 600 aa13.35□□□□□ -0.27
CASC19-272ENST00000641991 PFKFB3Q16875 520 aaPredicted RBP13.35□□□□□ -0.27
CASC19-272ENST00000641991 ANGEL2Q5VTE6 544 aaKnown RBP13.35□□□□□ -0.27
CASC19-272ENST00000641991 DEFB129Q9H1M3 183 aa13.35□□□□□ -0.27
CASC19-272ENST00000641991 GGA3Q9NZ52 723 aa13.35□□□□□ -0.27
CASC19-272ENST00000641991 ZBTB21Q9ULJ3 1066 aa13.35□□□□□ -0.27
CASC19-272ENST00000641991 SYNPO2Q9UMS6 1093 aa13.35□□□□□ -0.27
CASC19-272ENST00000641991 ZC3H4Q9UPT8 1303 aaKnown RBP13.35□□□□□ -0.27
CASC19-272ENST00000641991 PHF20L1A8MW92 1017 aa13.34□□□□□ -0.27
CASC19-272ENST00000641991 U2AF2P26368 475 aaKnown RBP eCLIP13.34□□□□□ -0.276e-7■■■□□ 19.1
CASC19-272ENST00000641991 ATP2B2Q01814 1243 aa13.34□□□□□ -0.27
CASC19-272ENST00000641991 GPR162Q16538 588 aa13.34□□□□□ -0.27
CASC19-272ENST00000641991 MIGA2Q7L4E1 593 aa13.34□□□□□ -0.27
CASC19-272ENST00000641991 USP48Q86UV5 1035 aa13.34□□□□□ -0.27
CASC19-272ENST00000641991 GMCL1P1Q8NEA9 526 aa13.34□□□□□ -0.27
CASC19-272ENST00000641991 L3MBTL3Q96JM7 780 aaPredicted RBP13.34□□□□□ -0.27
CASC19-272ENST00000641991 CABP5Q9NP86 173 aa13.34□□□□□ -0.27
CASC19-272ENST00000641991 VPS54Q9P1Q0 977 aa13.34□□□□□ -0.27
CASC19-272ENST00000641991 KCNJ14Q9UNX9 436 aa13.34□□□□□ -0.27
CASC19-272ENST00000641991 MYH8P13535 1937 aa13.34□□□□□ -0.27
CASC19-272ENST00000641991 ELP1O95163 1332 aa13.34□□□□□ -0.27
CASC19-272ENST00000641991 CAP2P40123 477 aa13.33□□□□□ -0.27
CASC19-272ENST00000641991 NPY5RQ15761 445 aa13.33□□□□□ -0.27
CASC19-272ENST00000641991 CSPP1Q1MSJ5 1256 aa13.33□□□□□ -0.27
CASC19-272ENST00000641991 KLHL40Q2TBA0 621 aa13.33□□□□□ -0.27
CASC19-272ENST00000641991 SKOR2Q2VWA4 1001 aaPredicted RBP13.33□□□□□ -0.27
CASC19-272ENST00000641991 ATL3Q6DD88 541 aa13.33□□□□□ -0.27
CASC19-272ENST00000641991 DCAF4Q8WV16 495 aa13.33□□□□□ -0.27
CASC19-272ENST00000641991 PHF20Q9BVI0 1012 aa13.33□□□□□ -0.27
CASC19-272ENST00000641991 SCAND2PQ9GZW5 306 aaPredicted RBP13.33□□□□□ -0.27
CASC19-272ENST00000641991 CPVLQ9H3G5 476 aa13.33□□□□□ -0.27
CASC19-272ENST00000641991 RIOX1Q9H6W3 641 aa13.33□□□□□ -0.27
CASC19-272ENST00000641991 ADARB2Q9NS39 739 aaKnown RBP13.33□□□□□ -0.27
CASC19-272ENST00000641991 PPP2R3BQ9Y5P8 575 aa13.33□□□□□ -0.27
CASC19-272ENST00000641991 FRMPD2Q68DX3 1309 aaPredicted RBP13.33□□□□□ -0.28
CASC19-272ENST00000641991 PITPNM2Q9BZ72 1349 aa13.33□□□□□ -0.28
CASC19-272ENST00000641991 A0A1W2PRG0 241 aa13.32□□□□□ -0.28
CASC19-272ENST00000641991 GRIN3BO60391 1043 aa13.32□□□□□ -0.28
CASC19-272ENST00000641991 VEGFAP15692 232 aaPredicted RBP13.32□□□□□ -0.28
CASC19-272ENST00000641991 XBP1P17861 261 aa13.32□□□□□ -0.28
CASC19-272ENST00000641991 LMOD1P29536 600 aaPredicted RBP13.32□□□□□ -0.28
CASC19-272ENST00000641991 GPATCH4Q5T3I0 446 aaKnown RBP13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms