RNA–Protein interactions for RNA: ENST00000641375.1

PHGDH-216, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,196 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-216ENST00000641375 CD2APQ9Y5K6 639 aa18.95■□□□□ 0.62
PHGDH-216ENST00000641375 BAZ2BQ9UIF8 2168 aaKnown RBP18.94■□□□□ 0.62
PHGDH-216ENST00000641375 PALM3A6NDB9 673 aaPredicted RBP18.94■□□□□ 0.62
PHGDH-216ENST00000641375 ENTPD3O75355 529 aa18.94■□□□□ 0.62
PHGDH-216ENST00000641375 SHMT1P34896 483 aa18.94■□□□□ 0.62
PHGDH-216ENST00000641375 CCDC73Q6ZRK6 1079 aa18.94■□□□□ 0.62
PHGDH-216ENST00000641375 CCAR1Q8IX12 1150 aaKnown RBP18.94■□□□□ 0.62
PHGDH-216ENST00000641375 COL4A5P29400 1685 aa18.94■□□□□ 0.62
PHGDH-216ENST00000641375 hCG_1642624A0A1W2PR95 340 aa18.93■□□□□ 0.62
PHGDH-216ENST00000641375 NR1I2O75469 434 aa18.93■□□□□ 0.62
PHGDH-216ENST00000641375 KRT2P35908 639 aa18.93■□□□□ 0.62
PHGDH-216ENST00000641375 CACNB3P54284 484 aa18.93■□□□□ 0.62
PHGDH-216ENST00000641375 TCP10Q12799 353 aa18.93■□□□□ 0.62
PHGDH-216ENST00000641375 STAG2Q8N3U4 1231 aa18.93■□□□□ 0.62
PHGDH-216ENST00000641375 GMLQ99445 158 aa18.93■□□□□ 0.62
PHGDH-216ENST00000641375 TAOK3Q9H2K8 898 aa18.93■□□□□ 0.62
PHGDH-216ENST00000641375 COL2A1P02458 1487 aaPredicted RBP18.93■□□□□ 0.62
PHGDH-216ENST00000641375 SIPA1L1O43166 1804 aa18.93■□□□□ 0.62
PHGDH-216ENST00000641375 IGKV6D-41A0A0C4DH26 115 aa18.93■□□□□ 0.62
PHGDH-216ENST00000641375 PPP6R2O75170 966 aa18.93■□□□□ 0.62
PHGDH-216ENST00000641375 PARP1P09874 1014 aaKnown RBP18.93■□□□□ 0.62
PHGDH-216ENST00000641375 AKR1B1P15121 316 aa18.93■□□□□ 0.62
PHGDH-216ENST00000641375 ZSCAN29Q8IWY8 852 aaPredicted RBP18.93■□□□□ 0.62
PHGDH-216ENST00000641375 ZFPM1Q8IX07 1006 aa18.93■□□□□ 0.62
PHGDH-216ENST00000641375 AGBL3Q8NEM8 1001 aa18.93■□□□□ 0.62
PHGDH-216ENST00000641375 TNMDQ9H2S6 317 aa18.93■□□□□ 0.62
PHGDH-216ENST00000641375 TDRD3Q9H7E2 651 aaKnown RBP18.93■□□□□ 0.62
PHGDH-216ENST00000641375 SH3GLB2Q9NR46 395 aa18.93■□□□□ 0.62
PHGDH-216ENST00000641375 TMOD2Q9NZR1 351 aa18.93■□□□□ 0.62
PHGDH-216ENST00000641375 PPP1R1BQ9UD71 204 aaPredicted RBP18.93■□□□□ 0.62
PHGDH-216ENST00000641375 GREB1LQ9C091 1923 aaPredicted RBP18.93■□□□□ 0.62
PHGDH-216ENST00000641375 TTLL1O95922 423 aa18.92■□□□□ 0.62
PHGDH-216ENST00000641375 SMARCA1P28370 1054 aa18.92■□□□□ 0.62
PHGDH-216ENST00000641375 MAP3K11Q16584 847 aa18.92■□□□□ 0.62
PHGDH-216ENST00000641375 FOXP4Q8IVH2 680 aaPredicted RBP18.92■□□□□ 0.62
PHGDH-216ENST00000641375 MRPS27Q92552 414 aaKnown RBP18.92■□□□□ 0.62
PHGDH-216ENST00000641375 PRMT6Q96LA8 375 aaPredicted RBP18.92■□□□□ 0.62
PHGDH-216ENST00000641375 TRIM34Q9BYJ4 488 aa18.92■□□□□ 0.62
PHGDH-216ENST00000641375 CLSTN2Q9H4D0 955 aa18.92■□□□□ 0.62
PHGDH-216ENST00000641375 RRP9O43818 475 aaKnown RBP18.92■□□□□ 0.62
PHGDH-216ENST00000641375 FAM160A1Q05DH4 1040 aa18.92■□□□□ 0.62
PHGDH-216ENST00000641375 JDP2Q8WYK2 163 aa18.92■□□□□ 0.62
PHGDH-216ENST00000641375 SGIP1Q9BQI5 828 aa18.92■□□□□ 0.62
PHGDH-216ENST00000641375 SPZ1Q9BXG8 430 aa18.92■□□□□ 0.62
PHGDH-216ENST00000641375 RBSNQ9H1K0 784 aa18.92■□□□□ 0.62
PHGDH-216ENST00000641375 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.92■□□□□ 0.62
PHGDH-216ENST00000641375 ATRNL1Q5VV63 1379 aa18.92■□□□□ 0.62
PHGDH-216ENST00000641375 DDTLA6NHG4 134 aaPredicted RBP18.91■□□□□ 0.62
PHGDH-216ENST00000641375 SPDYE2BA6NHP3 402 aa18.91■□□□□ 0.62
PHGDH-216ENST00000641375 KLRF2D3W0D1 207 aa18.91■□□□□ 0.62
PHGDH-216ENST00000641375 SPDYE6P0CI01 402 aa18.91■□□□□ 0.62
PHGDH-216ENST00000641375 NR5A1Q13285 461 aa18.91■□□□□ 0.62
PHGDH-216ENST00000641375 FAM177A1Q8N128 213 aaPredicted RBP18.91■□□□□ 0.62
PHGDH-216ENST00000641375 ANP32BQ92688 251 aaKnown RBP18.91■□□□□ 0.62
PHGDH-216ENST00000641375 PTPAQ15257 358 aa18.91■□□□□ 0.62
PHGDH-216ENST00000641375 DLGAP5Q15398 846 aa18.91■□□□□ 0.62
PHGDH-216ENST00000641375 FSIP1Q8NA03 581 aa18.91■□□□□ 0.62
PHGDH-216ENST00000641375 OXER1Q8TDS5 423 aa18.91■□□□□ 0.62
PHGDH-216ENST00000641375 SHISA4Q96DD7 197 aa18.91■□□□□ 0.62
PHGDH-216ENST00000641375 MTMR7Q9Y216 660 aa18.91■□□□□ 0.62
PHGDH-216ENST00000641375 CALML3P27482 149 aa18.9■□□□□ 0.62
PHGDH-216ENST00000641375 CEP131Q9UPN4 1083 aa18.9■□□□□ 0.62
PHGDH-216ENST00000641375 MYH4Q9Y623 1939 aa18.9■□□□□ 0.62
PHGDH-216ENST00000641375 MPHOSPH10O00566 681 aaKnown RBP18.89■□□□□ 0.62
PHGDH-216ENST00000641375 CTAGE5O15320 804 aa18.89■□□□□ 0.62
PHGDH-216ENST00000641375 NLRP5P59047 1200 aa18.89■□□□□ 0.62
PHGDH-216ENST00000641375 CAMK4Q16566 473 aa18.89■□□□□ 0.62
PHGDH-216ENST00000641375 RBM43Q6ZSC3 357 aaKnown RBP18.89■□□□□ 0.62
PHGDH-216ENST00000641375 SH3BP5LQ7L8J4 393 aa18.89■□□□□ 0.62
PHGDH-216ENST00000641375 METTL16Q86W50 562 aaKnown RBP18.89■□□□□ 0.62
PHGDH-216ENST00000641375 UPF1Q92900 1129 aaKnown RBP eCLIP18.89■□□□□ 0.62
PHGDH-216ENST00000641375 PANK2Q9BZ23 570 aa18.89■□□□□ 0.62
PHGDH-216ENST00000641375 DNAJC18Q9H819 358 aa18.89■□□□□ 0.62
PHGDH-216ENST00000641375 KINO60870 393 aaKnown RBP18.89■□□□□ 0.61
PHGDH-216ENST00000641375 CCDC192P0DO97 292 aa18.89■□□□□ 0.61
PHGDH-216ENST00000641375 MMP14P50281 582 aa18.89■□□□□ 0.61
PHGDH-216ENST00000641375 TOB1P50616 345 aaPredicted RBP18.89■□□□□ 0.61
PHGDH-216ENST00000641375 SNW1Q13573 536 aaKnown RBP18.89■□□□□ 0.61
PHGDH-216ENST00000641375 CERKLQ49MI3 558 aaPredicted RBP18.89■□□□□ 0.61
PHGDH-216ENST00000641375 TATDN1Q6P1N9 297 aa18.89■□□□□ 0.61
PHGDH-216ENST00000641375 MTMR14Q8NCE2 650 aa18.89■□□□□ 0.61
PHGDH-216ENST00000641375 ENGASEQ8NFI3 743 aa18.89■□□□□ 0.61
PHGDH-216ENST00000641375 GOLPH3LQ9H4A5 285 aa18.89■□□□□ 0.61
PHGDH-216ENST00000641375 CABP5Q9NP86 173 aa18.89■□□□□ 0.61
PHGDH-216ENST00000641375 CLIP2Q9UDT6 1046 aa18.89■□□□□ 0.61
PHGDH-216ENST00000641375 CYTH3O43739 400 aa18.88■□□□□ 0.61
PHGDH-216ENST00000641375 PDHBP11177 359 aa18.88■□□□□ 0.61
PHGDH-216ENST00000641375 CMA1P23946 247 aa18.88■□□□□ 0.61
PHGDH-216ENST00000641375 CXCL9Q07325 125 aa18.88■□□□□ 0.61
PHGDH-216ENST00000641375 ASPRV1Q53RT3 343 aa18.88■□□□□ 0.61
PHGDH-216ENST00000641375 AXDND1Q5T1B0 1012 aaPredicted RBP18.88■□□□□ 0.61
PHGDH-216ENST00000641375 USP17L2Q6R6M4 530 aa18.88■□□□□ 0.61
PHGDH-216ENST00000641375 CCDC148Q8NFR7 591 aa18.88■□□□□ 0.61
PHGDH-216ENST00000641375 PIBF1Q8WXW3 757 aa18.88■□□□□ 0.61
PHGDH-216ENST00000641375 FUCA2Q9BTY2 467 aa18.88■□□□□ 0.61
PHGDH-216ENST00000641375 ZBTB12Q9Y330 459 aaPredicted RBP18.88■□□□□ 0.61
PHGDH-216ENST00000641375 GOLGA8HP0CJ92 632 aa18.88■□□□□ 0.61
PHGDH-216ENST00000641375 MARCKSP29966 332 aaPredicted RBP18.88■□□□□ 0.61
PHGDH-216ENST00000641375 NPY5RQ15761 445 aa18.88■□□□□ 0.61
PHGDH-216ENST00000641375 CIAPIN1Q6FI81 312 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms