RNA–Protein interactions for RNA: ENST00000641074.1

PHGDH-209, Transcript of phosphoglycerate dehydrogenase, humanhuman

BASIC

Gene PHGDH, Length 1,780 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-209ENST00000641074 PALM3A6NDB9 673 aaPredicted RBP21.11■□□□□ 0.97
PHGDH-209ENST00000641074 TTLL1O95922 423 aa21.11■□□□□ 0.97
PHGDH-209ENST00000641074 GNAQP50148 359 aa21.11■□□□□ 0.97
PHGDH-209ENST00000641074 UBE2HP62256 183 aa21.11■□□□□ 0.97
PHGDH-209ENST00000641074 RASGRP2Q7LDG7 609 aa21.11■□□□□ 0.97
PHGDH-209ENST00000641074 DPF2Q92785 391 aa21.11■□□□□ 0.97
PHGDH-209ENST00000641074 SPATA32Q96LK8 384 aa21.11■□□□□ 0.97
PHGDH-209ENST00000641074 CLIP2Q9UDT6 1046 aa21.11■□□□□ 0.97
PHGDH-209ENST00000641074 KCNJ14Q9UNX9 436 aa21.11■□□□□ 0.97
PHGDH-209ENST00000641074 ZNF541Q9H0D2 1346 aa21.11■□□□□ 0.97
PHGDH-209ENST00000641074 EGFRP00533 1210 aa21.1■□□□□ 0.97
PHGDH-209ENST00000641074 MMP1P03956 469 aa21.1■□□□□ 0.97
PHGDH-209ENST00000641074 SHROOM1Q2M3G4 852 aaPredicted RBP21.1■□□□□ 0.97
PHGDH-209ENST00000641074 ATL3Q6DD88 541 aa21.1■□□□□ 0.97
PHGDH-209ENST00000641074 SHISA4Q96DD7 197 aa21.1■□□□□ 0.97
PHGDH-209ENST00000641074 ZNF396Q96N95 335 aaPredicted RBP21.1■□□□□ 0.97
PHGDH-209ENST00000641074 USP28Q96RU2 1077 aa21.1■□□□□ 0.97
PHGDH-209ENST00000641074 SYT17Q9BSW7 474 aa21.1■□□□□ 0.97
PHGDH-209ENST00000641074 FTOQ9C0B1 505 aaKnown RBP eCLIP21.1■□□□□ 0.97
PHGDH-209ENST00000641074 CEBPZQ03701 1054 aaKnown RBP21.1■□□□□ 0.97
PHGDH-209ENST00000641074 RBM26Q5T8P6 1007 aaKnown RBP21.1■□□□□ 0.97
PHGDH-209ENST00000641074 CAVIN1Q6NZI2 390 aaKnown RBP21.1■□□□□ 0.97
PHGDH-209ENST00000641074 MICALL2Q8IY33 904 aa21.1■□□□□ 0.97
PHGDH-209ENST00000641074 LRRC47Q8N1G4 583 aaKnown RBP21.1■□□□□ 0.97
PHGDH-209ENST00000641074 GOLGA8HP0CJ92 632 aa21.09■□□□□ 0.97
PHGDH-209ENST00000641074 LMNB1P20700 586 aa21.09■□□□□ 0.97
PHGDH-209ENST00000641074 U2AF2P26368 475 aaKnown RBP eCLIP21.09■□□□□ 0.974e-10■■□□□ 11.5
PHGDH-209ENST00000641074 SLC35G1Q2M3R5 365 aa21.09■□□□□ 0.97
PHGDH-209ENST00000641074 MYSM1Q5VVJ2 828 aa21.09■□□□□ 0.97
PHGDH-209ENST00000641074 USP17L2Q6R6M4 530 aa21.09■□□□□ 0.97
PHGDH-209ENST00000641074 FAM83AQ86UY5 434 aa21.09■□□□□ 0.97
PHGDH-209ENST00000641074 VPS54Q9P1Q0 977 aa21.09■□□□□ 0.97
PHGDH-209ENST00000641074 CNOT7Q9UIV1 285 aaKnown RBP21.09■□□□□ 0.97
PHGDH-209ENST00000641074 BAZ2BQ9UIF8 2168 aaKnown RBP21.08■□□□□ 0.97
PHGDH-209ENST00000641074 USP17L5A8MUK1 530 aa21.08■□□□□ 0.97
PHGDH-209ENST00000641074 PARP1P09874 1014 aaKnown RBP21.08■□□□□ 0.97
PHGDH-209ENST00000641074 GNL2Q13823 731 aaKnown RBP21.08■□□□□ 0.97
PHGDH-209ENST00000641074 TPRNQ4KMQ1 711 aa21.08■□□□□ 0.97
PHGDH-209ENST00000641074 PIBF1Q8WXW3 757 aa21.08■□□□□ 0.97
PHGDH-209ENST00000641074 TMEM39BQ9GZU3 492 aa21.08■□□□□ 0.97
PHGDH-209ENST00000641074 RBM27Q9P2N5 1060 aaKnown RBP21.08■□□□□ 0.97
PHGDH-209ENST00000641074 HERC5Q9UII4 1024 aaKnown RBP21.08■□□□□ 0.97
PHGDH-209ENST00000641074 KLRF2D3W0D1 207 aa21.08■□□□□ 0.96
PHGDH-209ENST00000641074 PDHBP11177 359 aa21.08■□□□□ 0.96
PHGDH-209ENST00000641074 XBP1P17861 261 aa21.08■□□□□ 0.96
PHGDH-209ENST00000641074 SAFBQ15424 915 aaKnown RBP eCLIP21.08■□□□□ 0.96
PHGDH-209ENST00000641074 LZTS2Q9BRK4 669 aa21.08■□□□□ 0.96
PHGDH-209ENST00000641074 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.08■□□□□ 0.962e-7■■■■□ 19.6
PHGDH-209ENST00000641074 RCOR1Q9UKL0 485 aa21.08■□□□□ 0.96
PHGDH-209ENST00000641074 BTBD18B2RXH4 712 aa21.07■□□□□ 0.96
PHGDH-209ENST00000641074 CYTH3O43739 400 aa21.07■□□□□ 0.96
PHGDH-209ENST00000641074 GDF11O95390 407 aa21.07■□□□□ 0.96
PHGDH-209ENST00000641074 SCG2P13521 617 aa21.07■□□□□ 0.96
PHGDH-209ENST00000641074 RRP1BQ14684 758 aaKnown RBP21.07■□□□□ 0.96
PHGDH-209ENST00000641074 PFKFB3Q16875 520 aaPredicted RBP21.07■□□□□ 0.96
PHGDH-209ENST00000641074 ABCB5Q2M3G0 1257 aa21.07■□□□□ 0.96
PHGDH-209ENST00000641074 PPP4R3BQ5MIZ7 849 aa21.07■□□□□ 0.96
PHGDH-209ENST00000641074 SAMD7Q7Z3H4 446 aa21.07■□□□□ 0.96
PHGDH-209ENST00000641074 CDAN1Q8IWY9 1227 aa21.07■□□□□ 0.96
PHGDH-209ENST00000641074 DIS3L2Q8IYB7 885 aaKnown RBP21.07■□□□□ 0.96
PHGDH-209ENST00000641074 VEGFAP15692 232 aaPredicted RBP21.06■□□□□ 0.96
PHGDH-209ENST00000641074 ATP2B2Q01814 1243 aa21.06■□□□□ 0.96
PHGDH-209ENST00000641074 TMEM179Q6ZVK1 233 aa21.06■□□□□ 0.96
PHGDH-209ENST00000641074 PHF20Q9BVI0 1012 aa21.06■□□□□ 0.96
PHGDH-209ENST00000641074 KANSL2Q9H9L4 492 aa21.06■□□□□ 0.96
PHGDH-209ENST00000641074 RTEL1Q9NZ71 1219 aa21.06■□□□□ 0.96
PHGDH-209ENST00000641074 TMEM63CQ9P1W3 806 aa21.06■□□□□ 0.96
PHGDH-209ENST00000641074 PGAP2Q9UHJ9 254 aa21.06■□□□□ 0.96
PHGDH-209ENST00000641074 SNHG28P0DPA3 235 aa21.05■□□□□ 0.96
PHGDH-209ENST00000641074 JAG1P78504 1218 aa21.05■□□□□ 0.96
PHGDH-209ENST00000641074 SEPT2Q15019 361 aa21.05■□□□□ 0.96
PHGDH-209ENST00000641074 TBC1D10BQ4KMP7 808 aaPredicted RBP21.05■□□□□ 0.96
PHGDH-209ENST00000641074 FOXP1Q9H334 677 aaPredicted RBP21.05■□□□□ 0.96
PHGDH-209ENST00000641074 CPVLQ9H3G5 476 aa21.05■□□□□ 0.96
PHGDH-209ENST00000641074 SRCAPQ6ZRS2 3230 aa21.05■□□□□ 0.96
PHGDH-209ENST00000641074 DICER1Q9UPY3 1922 aaKnown RBP21.05■□□□□ 0.96
PHGDH-209ENST00000641074 EEF2P13639 858 aaKnown RBP21.05■□□□□ 0.96
PHGDH-209ENST00000641074 SIAH1Q8IUQ4 282 aa21.05■□□□□ 0.96
PHGDH-209ENST00000641074 NOSTRINQ8IVI9 506 aa21.05■□□□□ 0.96
PHGDH-209ENST00000641074 OXER1Q8TDS5 423 aa21.05■□□□□ 0.96
PHGDH-209ENST00000641074 MKL1Q969V6 931 aa21.05■□□□□ 0.96
PHGDH-209ENST00000641074 PGBD1Q96JS3 809 aa21.05■□□□□ 0.96
PHGDH-209ENST00000641074 SPZ1Q9BXG8 430 aa21.05■□□□□ 0.96
PHGDH-209ENST00000641074 NYAP2Q9P242 653 aa21.05■□□□□ 0.96
PHGDH-209ENST00000641074 SCAF8Q9UPN6 1271 aaKnown RBP21.05■□□□□ 0.96
PHGDH-209ENST00000641074 CLIC4Q9Y696 253 aa21.05■□□□□ 0.96
PHGDH-209ENST00000641074 FRMPD2Q68DX3 1309 aaPredicted RBP21.04■□□□□ 0.96
PHGDH-209ENST00000641074 GH2P01242 217 aa21.04■□□□□ 0.96
PHGDH-209ENST00000641074 MYH4Q9Y623 1939 aa21.04■□□□□ 0.96
PHGDH-209ENST00000641074 SBF1O95248 1867 aa21.04■□□□□ 0.96
PHGDH-209ENST00000641074 ASTN2O75129 1339 aaPredicted RBP21.03■□□□□ 0.96
PHGDH-209ENST00000641074 TBC1D12O60347 775 aa21.03■□□□□ 0.96
PHGDH-209ENST00000641074 YBX3P16989 372 aaKnown RBP eCLIP21.03■□□□□ 0.962e-7■□□□□ 9.8
PHGDH-209ENST00000641074 SMARCA1P28370 1054 aa21.03■□□□□ 0.96
PHGDH-209ENST00000641074 TNNI2P48788 182 aa21.03■□□□□ 0.96
PHGDH-209ENST00000641074 NR5A1Q13285 461 aa21.03■□□□□ 0.96
PHGDH-209ENST00000641074 RASA3Q14644 834 aa21.03■□□□□ 0.96
PHGDH-209ENST00000641074 KIF4BQ2VIQ3 1234 aa21.03■□□□□ 0.96
PHGDH-209ENST00000641074 ASPRV1Q53RT3 343 aa21.03■□□□□ 0.96
PHGDH-209ENST00000641074 POLR3EQ9NVU0 708 aa21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms