RNA–Protein interactions for RNA: ENST00000638141.1

CAPN3-221, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 2,358 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-221ENST00000638141 HSF2BPO75031 334 aa13.46□□□□□ -0.25
CAPN3-221ENST00000638141 RAB27AP51159 221 aa13.46□□□□□ -0.25
CAPN3-221ENST00000638141 FOSBP53539 338 aa13.46□□□□□ -0.25
CAPN3-221ENST00000638141 GUCY1B3Q02153 619 aa13.46□□□□□ -0.25
CAPN3-221ENST00000638141 KIF23Q02241 960 aaPredicted RBP13.46□□□□□ -0.25
CAPN3-221ENST00000638141 FMR1Q06787 632 aaKnown RBP eCLIP13.46□□□□□ -0.25
CAPN3-221ENST00000638141 MORC3Q14149 939 aa13.46□□□□□ -0.25
CAPN3-221ENST00000638141 PPP4R3AQ6IN85 833 aa13.46□□□□□ -0.25
CAPN3-221ENST00000638141 ACRBPQ8NEB7 543 aa13.46□□□□□ -0.25
CAPN3-221ENST00000638141 OSBPL9Q96SU4 736 aa13.46□□□□□ -0.25
CAPN3-221ENST00000638141 SEC62Q99442 399 aaKnown RBP13.46□□□□□ -0.25
CAPN3-221ENST00000638141 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.46□□□□□ -0.25
CAPN3-221ENST00000638141 C9orf78Q9NZ63 289 aaPredicted RBP13.46□□□□□ -0.25
CAPN3-221ENST00000638141 MAN1B1Q9UKM7 699 aa13.46□□□□□ -0.25
CAPN3-221ENST00000638141 IQSEC3Q9UPP2 1182 aaPredicted RBP13.46□□□□□ -0.25
CAPN3-221ENST00000638141 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.46□□□□□ -0.25
CAPN3-221ENST00000638141 ECM2O94769 699 aaPredicted RBP13.45□□□□□ -0.26
CAPN3-221ENST00000638141 PLCD1P51178 756 aa13.45□□□□□ -0.26
CAPN3-221ENST00000638141 ANKRD20A8PQ5CZ79 823 aa13.45□□□□□ -0.26
CAPN3-221ENST00000638141 BRINP3Q76B58 766 aa13.45□□□□□ -0.26
CAPN3-221ENST00000638141 SND1Q7KZF4 910 aaKnown RBP eCLIP13.45□□□□□ -0.26
CAPN3-221ENST00000638141 ARMC9Q7Z3E5 817 aa13.45□□□□□ -0.26
CAPN3-221ENST00000638141 ARL8AQ96BM9 186 aa13.45□□□□□ -0.26
CAPN3-221ENST00000638141 PPFIA3O75145 1194 aa13.45□□□□□ -0.26
CAPN3-221ENST00000638141 SMNDC1O75940 238 aaKnown RBP eCLIP13.45□□□□□ -0.26
CAPN3-221ENST00000638141 IFT88Q13099 833 aa13.45□□□□□ -0.26
CAPN3-221ENST00000638141 DDX17Q92841 729 aaKnown RBP13.45□□□□□ -0.26
CAPN3-221ENST00000638141 CCDC8Q9H0W5 538 aaPredicted RBP13.45□□□□□ -0.26
CAPN3-221ENST00000638141 RABEP2Q9H5N1 569 aa13.45□□□□□ -0.26
CAPN3-221ENST00000638141 WDR19Q8NEZ3 1342 aa13.45□□□□□ -0.26
CAPN3-221ENST00000638141 C4AP0C0L4 1744 aa13.44□□□□□ -0.26
CAPN3-221ENST00000638141 C4BP0C0L5 1744 aa13.44□□□□□ -0.26
CAPN3-221ENST00000638141 GYPCP04921 128 aa13.44□□□□□ -0.26
CAPN3-221ENST00000638141 MDH1P40925 334 aaKnown RBP13.44□□□□□ -0.26
CAPN3-221ENST00000638141 ERVK-24P63145 666 aa13.44□□□□□ -0.26
CAPN3-221ENST00000638141 PTPAQ15257 358 aa13.44□□□□□ -0.26
CAPN3-221ENST00000638141 GLE1Q53GS7 698 aaKnown RBP13.44□□□□□ -0.26
CAPN3-221ENST00000638141 CAPRIN2Q6IMN6 1127 aaKnown RBP13.44□□□□□ -0.26
CAPN3-221ENST00000638141 KANK3Q6NY19 840 aa13.44□□□□□ -0.26
CAPN3-221ENST00000638141 MIS18BP1Q6P0N0 1132 aa13.44□□□□□ -0.26
CAPN3-221ENST00000638141 IL17REQ8NFR9 667 aa13.44□□□□□ -0.26
CAPN3-221ENST00000638141 PARD3BQ8TEW8 1205 aa13.44□□□□□ -0.26
CAPN3-221ENST00000638141 PA2G4Q9UQ80 394 aaKnown RBP13.44□□□□□ -0.26
CAPN3-221ENST00000638141 SPEF2Q9C093 1822 aa13.44□□□□□ -0.26
CAPN3-221ENST00000638141 USP54Q70EL1 1684 aa13.44□□□□□ -0.26
CAPN3-221ENST00000638141 ROBO1Q9Y6N7 1651 aa13.44□□□□□ -0.26
CAPN3-221ENST00000638141 EIF4A1P60842 406 aaKnown RBP13.44□□□□□ -0.26
CAPN3-221ENST00000638141 CCT2P78371 535 aaKnown RBP13.44□□□□□ -0.26
CAPN3-221ENST00000638141 CDKAL1Q5VV42 579 aa13.44□□□□□ -0.26
CAPN3-221ENST00000638141 BZW1Q7L1Q6 419 aaKnown RBP13.44□□□□□ -0.26
CAPN3-221ENST00000638141 MFN1Q8IWA4 741 aa13.44□□□□□ -0.26
CAPN3-221ENST00000638141 FNBP4Q8N3X1 1017 aaPredicted RBP13.44□□□□□ -0.26
CAPN3-221ENST00000638141 ACSBG1Q96GR2 724 aa13.44□□□□□ -0.26
CAPN3-221ENST00000638141 RNPC3Q96LT9 517 aaKnown RBP13.44□□□□□ -0.26
CAPN3-221ENST00000638141 SCLT1Q96NL6 688 aa13.44□□□□□ -0.26
CAPN3-221ENST00000638141 EYA1Q99502 592 aa13.44□□□□□ -0.26
CAPN3-221ENST00000638141 SLC39A2Q9NP94 309 aa13.44□□□□□ -0.26
CAPN3-221ENST00000638141 TRPC6Q9Y210 931 aa13.44□□□□□ -0.26
CAPN3-221ENST00000638141 UBN2Q6ZU65 1347 aa13.44□□□□□ -0.26
CAPN3-221ENST00000638141 MYO5AQ9Y4I1 1855 aaKnown RBP13.43□□□□□ -0.26
CAPN3-221ENST00000638141 C5orf60A6NFR6 353 aa13.43□□□□□ -0.26
CAPN3-221ENST00000638141 TEX33O43247 280 aa13.43□□□□□ -0.26
CAPN3-221ENST00000638141 HDLBPQ00341 1268 aaKnown RBP13.43□□□□□ -0.26
CAPN3-221ENST00000638141 SPECC1Q5M775 1068 aa13.43□□□□□ -0.26
CAPN3-221ENST00000638141 APLFQ8IW19 511 aaPredicted RBP13.43□□□□□ -0.26
CAPN3-221ENST00000638141 MREGQ8N565 214 aa13.43□□□□□ -0.26
CAPN3-221ENST00000638141 SPAG5Q96R06 1193 aa13.43□□□□□ -0.26
CAPN3-221ENST00000638141 HAUS7Q99871 368 aa13.43□□□□□ -0.26
CAPN3-221ENST00000638141 ABHD10Q9NUJ1 306 aa13.43□□□□□ -0.26
CAPN3-221ENST00000638141 H7C1W4 665 aa13.43□□□□□ -0.26
CAPN3-221ENST00000638141 COQ9O75208 318 aa13.43□□□□□ -0.26
CAPN3-221ENST00000638141 ABL1P00519 1130 aa13.43□□□□□ -0.26
CAPN3-221ENST00000638141 POLR3DP05423 398 aaPredicted RBP13.43□□□□□ -0.26
CAPN3-221ENST00000638141 CASP14P31944 242 aa13.43□□□□□ -0.26
CAPN3-221ENST00000638141 MKRN4PQ13434 485 aaPredicted RBP13.43□□□□□ -0.26
CAPN3-221ENST00000638141 KCNB1Q14721 858 aa13.43□□□□□ -0.26
CAPN3-221ENST00000638141 LONRF3Q496Y0 759 aa13.43□□□□□ -0.26
CAPN3-221ENST00000638141 SPATA1Q5VX52 437 aa13.43□□□□□ -0.26
CAPN3-221ENST00000638141 KSR2Q6VAB6 950 aa13.43□□□□□ -0.26
CAPN3-221ENST00000638141 GSPT2Q8IYD1 628 aaKnown RBP13.43□□□□□ -0.26
CAPN3-221ENST00000638141 ARFGAP2Q8N6H7 521 aa13.43□□□□□ -0.26
CAPN3-221ENST00000638141 TRIM58Q8NG06 486 aa13.43□□□□□ -0.26
CAPN3-221ENST00000638141 SPATA20Q8TB22 786 aa13.43□□□□□ -0.26
CAPN3-221ENST00000638141 CUL5Q93034 780 aa13.43□□□□□ -0.26
CAPN3-221ENST00000638141 CYFIP2Q96F07 1278 aa13.43□□□□□ -0.26
CAPN3-221ENST00000638141 GDAP1L1Q96MZ0 367 aa13.43□□□□□ -0.26
CAPN3-221ENST00000638141 MED15Q96RN5 788 aa13.43□□□□□ -0.26
CAPN3-221ENST00000638141 OSBPL7Q9BZF2 842 aa13.43□□□□□ -0.26
CAPN3-221ENST00000638141 SAMSN1Q9NSI8 373 aaKnown RBP13.43□□□□□ -0.26
CAPN3-221ENST00000638141 TLR7Q9NYK1 1049 aaKnown RBP13.43□□□□□ -0.26
CAPN3-221ENST00000638141 DBF4Q9UBU7 674 aaPredicted RBP13.43□□□□□ -0.26
CAPN3-221ENST00000638141 C15orf41Q9Y2V0 281 aa13.43□□□□□ -0.26
CAPN3-221ENST00000638141 HMGB1P1B2RPK0 211 aaPredicted RBP13.42□□□□□ -0.26
CAPN3-221ENST00000638141 E7EWF7 191 aa13.42□□□□□ -0.26
CAPN3-221ENST00000638141 AP1G2O75843 785 aa13.42□□□□□ -0.26
CAPN3-221ENST00000638141 ATP6V1G2O95670 118 aa13.42□□□□□ -0.26
CAPN3-221ENST00000638141 ATP1A1P05023 1023 aaKnown RBP13.42□□□□□ -0.26
CAPN3-221ENST00000638141 NR1D1P20393 614 aa13.42□□□□□ -0.26
CAPN3-221ENST00000638141 POSTNQ15063 836 aa13.42□□□□□ -0.26
CAPN3-221ENST00000638141 E2F5Q15329 346 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms