RNA–Protein interactions for RNA: ENST00000619976.1

SYNRG-227, Transcript of synergin gamma, human

TSL 2

Gene SYNRG, Length 1,375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SYNRG-227	ENST00000619976	NUCB1	Q02818	461 aa		33.2	■■■□□ 2.9
SYNRG-227	ENST00000619976	LBX2	Q6XYB7	198 aa		33.2	■■■□□ 2.9
SYNRG-227	ENST00000619976	PLXNB2	O15031	1838 aa		33.19	■■■□□ 2.9
SYNRG-227	ENST00000619976	CNMD	O75829	334 aa		33.19	■■■□□ 2.9
SYNRG-227	ENST00000619976	EEF2	P13639	858 aa	Known RBP	33.19	■■■□□ 2.9
SYNRG-227	ENST00000619976	CCAR1	Q8IX12	1150 aa	Known RBP	33.19	■■■□□ 2.9
SYNRG-227	ENST00000619976	LPAR1	Q92633	364 aa		33.19	■■■□□ 2.9
SYNRG-227	ENST00000619976	TANGO6	Q9C0B7	1094 aa		33.19	■■■□□ 2.9
SYNRG-227	ENST00000619976	PORCN	Q9H237	461 aa		33.19	■■■□□ 2.9
SYNRG-227	ENST00000619976	VCPKMT	Q9H867	229 aa		33.19	■■■□□ 2.9
SYNRG-227	ENST00000619976	SPDYE16	A6NNV3	312 aa	Predicted RBP	33.18	■■■□□ 2.9
SYNRG-227	ENST00000619976	INHA	P05111	366 aa		33.18	■■■□□ 2.9
SYNRG-227	ENST00000619976	ATP2B2	Q01814	1243 aa		33.18	■■■□□ 2.9
SYNRG-227	ENST00000619976	CCDC129	Q6ZRS4	1044 aa		33.18	■■■□□ 2.9
SYNRG-227	ENST00000619976	GREB1L	Q9C091	1923 aa	Predicted RBP	33.18	■■■□□ 2.9
SYNRG-227	ENST00000619976	COG2	Q14746	738 aa		33.17	■■■□□ 2.9
SYNRG-227	ENST00000619976	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	33.17	■■■□□ 2.9
SYNRG-227	ENST00000619976	RNF208	Q9H0X6	261 aa		33.17	■■■□□ 2.9
SYNRG-227	ENST00000619976	NAPB	Q9H115	298 aa		33.17	■■■□□ 2.9
SYNRG-227	ENST00000619976	SPICE1	Q8N0Z3	855 aa		33.16	■■■□□ 2.9
SYNRG-227	ENST00000619976	ZNF287	Q9HBT7	754 aa		33.16	■■■□□ 2.9
SYNRG-227	ENST00000619976	RLF	Q13129	1914 aa		33.15	■■■□□ 2.9
SYNRG-227	ENST00000619976	CCNA1	P78396	465 aa		33.15	■■■□□ 2.9
SYNRG-227	ENST00000619976	NUDT12	Q9BQG2	462 aa		33.15	■■■□□ 2.9
SYNRG-227	ENST00000619976	UNC93B1	Q9H1C4	597 aa		33.15	■■■□□ 2.9
SYNRG-227	ENST00000619976	HOXC10	Q9NYD6	342 aa		33.15	■■■□□ 2.9
SYNRG-227	ENST00000619976	BTBD7	Q9P203	1132 aa		33.15	■■■□□ 2.9
SYNRG-227	ENST00000619976	TRIM6-TRIM34	B2RNG4	842 aa		33.14	■■■□□ 2.9
SYNRG-227	ENST00000619976	GJB1	P08034	283 aa		33.14	■■■□□ 2.9
SYNRG-227	ENST00000619976	GPR142	Q7Z601	462 aa		33.14	■■■□□ 2.9
SYNRG-227	ENST00000619976	TICAM2	Q86XR7	235 aa		33.14	■■■□□ 2.9
SYNRG-227	ENST00000619976	PLEKHM2	Q8IWE5	1019 aa		33.14	■■■□□ 2.9
SYNRG-227	ENST00000619976	SOCS4	Q8WXH5	440 aa		33.14	■■■□□ 2.9
SYNRG-227	ENST00000619976	HELLS	Q9NRZ9	838 aa		33.14	■■■□□ 2.9
SYNRG-227	ENST00000619976	PLEKHH3	Q7Z736	793 aa		33.13	■■■□□ 2.89
SYNRG-227	ENST00000619976	ZNF444	Q8N0Y2	327 aa	Predicted RBP	33.13	■■■□□ 2.89
SYNRG-227	ENST00000619976	NKX2-3	Q8TAU0	364 aa		33.13	■■■□□ 2.89
SYNRG-227	ENST00000619976	WDR46	O15213	610 aa	Known RBP	33.12	■■■□□ 2.89
SYNRG-227	ENST00000619976	FOXP2	O15409	715 aa		33.12	■■■□□ 2.89
SYNRG-227	ENST00000619976	PRDM1	O75626	825 aa		33.12	■■■□□ 2.89
SYNRG-227	ENST00000619976	IRX6	P78412	446 aa	Predicted RBP	33.12	■■■□□ 2.89
SYNRG-227	ENST00000619976	OSBPL3	Q9H4L5	887 aa		33.12	■■■□□ 2.89
SYNRG-227	ENST00000619976	CWC22	Q9HCG8	908 aa	Known RBP	33.12	■■■□□ 2.89
SYNRG-227	ENST00000619976	GOPC	Q9HD26	462 aa		33.12	■■■□□ 2.89
SYNRG-227	ENST00000619976	CYP2B6	P20813	491 aa		33.11	■■■□□ 2.89
SYNRG-227	ENST00000619976	GJA8	P48165	433 aa		33.11	■■■□□ 2.89
SYNRG-227	ENST00000619976	PPARA	Q07869	468 aa		33.11	■■■□□ 2.89
SYNRG-227	ENST00000619976	RILPL2	Q969X0	211 aa		33.11	■■■□□ 2.89
SYNRG-227	ENST00000619976	SHISA4	Q96DD7	197 aa		33.11	■■■□□ 2.89
SYNRG-227	ENST00000619976	FAM227B	Q96M60	508 aa		33.11	■■■□□ 2.89
SYNRG-227	ENST00000619976	MKI67	P46013	3256 aa	Known RBP	33.11	■■■□□ 2.89
SYNRG-227	ENST00000619976	FLOT1	O75955	427 aa		33.1	■■■□□ 2.89
SYNRG-227	ENST00000619976	HMGCR	P04035	888 aa		33.1	■■■□□ 2.89
SYNRG-227	ENST00000619976	SLC3A2	P08195	630 aa	Known RBP	33.1	■■■□□ 2.89
SYNRG-227	ENST00000619976	PDE4B	Q07343	736 aa		33.1	■■■□□ 2.89
SYNRG-227	ENST00000619976	NYAP2	Q9P242	653 aa		33.1	■■■□□ 2.89
SYNRG-227	ENST00000619976		A0A0D9SFI3	127 aa		33.09	■■■□□ 2.89
SYNRG-227	ENST00000619976	DSG3	P32926	999 aa		33.09	■■■□□ 2.89
SYNRG-227	ENST00000619976	MORN1	Q5T089	497 aa		33.09	■■■□□ 2.89
SYNRG-227	ENST00000619976	VPS53	Q5VIR6	699 aa		33.09	■■■□□ 2.89
SYNRG-227	ENST00000619976	USP6NL	Q92738	828 aa		33.09	■■■□□ 2.89
SYNRG-227	ENST00000619976	PARP14	Q460N5	1801 aa		33.09	■■■□□ 2.89
SYNRG-227	ENST00000619976		A0A0G2JMZ2	1700 aa		33.09	■■■□□ 2.89
SYNRG-227	ENST00000619976	XRCC5	P13010	732 aa	Known RBP	33.09	■■■□□ 2.89
SYNRG-227	ENST00000619976	MCMDC2	Q4G0Z9	681 aa		33.09	■■■□□ 2.89
SYNRG-227	ENST00000619976	WDR78	Q5VTH9	848 aa		33.09	■■■□□ 2.89
SYNRG-227	ENST00000619976	IGKV6D-41	A0A0C4DH26	115 aa		33.08	■■■□□ 2.89
SYNRG-227	ENST00000619976	RAD21	O60216	631 aa		33.08	■■■□□ 2.89
SYNRG-227	ENST00000619976	MB21D1	Q8N884	522 aa		33.08	■■■□□ 2.89
SYNRG-227	ENST00000619976	U2AF1L4	Q8WU68	220 aa	Known RBP	33.08	■■■□□ 2.89
SYNRG-227	ENST00000619976	TRIB2	Q92519	343 aa		33.08	■■■□□ 2.89
SYNRG-227	ENST00000619976	MYH4	Q9Y623	1939 aa		33.07	■■■□□ 2.88
SYNRG-227	ENST00000619976	RGS2	P41220	211 aa		33.07	■■■□□ 2.88
SYNRG-227	ENST00000619976	NMI	Q13287	307 aa	Predicted RBP	33.07	■■■□□ 2.88
SYNRG-227	ENST00000619976	ATG4C	Q96DT6	458 aa		33.07	■■■□□ 2.88
SYNRG-227	ENST00000619976	SAMD1	Q6SPF0	538 aa	Predicted RBP	33.06	■■■□□ 2.88
SYNRG-227	ENST00000619976	PAK6	Q9NQU5	681 aa	Predicted RBP	33.06	■■■□□ 2.88
SYNRG-227	ENST00000619976	CLIP2	Q9UDT6	1046 aa		33.06	■■■□□ 2.88
SYNRG-227	ENST00000619976	SGPL1	O95470	568 aa		33.05	■■■□□ 2.88
SYNRG-227	ENST00000619976	PTPRE	P23469	700 aa		33.05	■■■□□ 2.88
SYNRG-227	ENST00000619976	TRIM32	Q13049	653 aa		33.05	■■■□□ 2.88
SYNRG-227	ENST00000619976	ALX1	Q15699	326 aa		33.05	■■■□□ 2.88
SYNRG-227	ENST00000619976	TRMT44	Q8IYL2	757 aa	Known RBP	33.05	■■■□□ 2.88
SYNRG-227	ENST00000619976	CEP95	Q96GE4	821 aa		33.05	■■■□□ 2.88
SYNRG-227	ENST00000619976	MOV10L1	Q9BXT6	1211 aa	Known RBP	33.05	■■■□□ 2.88
SYNRG-227	ENST00000619976	SPATC1L	Q9H0A9	340 aa		33.05	■■■□□ 2.88
SYNRG-227	ENST00000619976	IVNS1ABP	Q9Y6Y0	642 aa		33.05	■■■□□ 2.88
SYNRG-227	ENST00000619976	SLC15A5	A6NIM6	579 aa		33.04	■■■□□ 2.88
SYNRG-227	ENST00000619976	TSPY3	P0CV98	308 aa		33.04	■■■□□ 2.88
SYNRG-227	ENST00000619976	TSPY8	P0CW00	308 aa		33.04	■■■□□ 2.88
SYNRG-227	ENST00000619976	MAP2K5	Q13163	448 aa		33.04	■■■□□ 2.88
SYNRG-227	ENST00000619976	FAM83B	Q5T0W9	1011 aa		33.04	■■■□□ 2.88
SYNRG-227	ENST00000619976	PRPF38B	Q5VTL8	546 aa	Known RBP	33.04	■■■□□ 2.88
SYNRG-227	ENST00000619976	NEDD1	Q8NHV4	660 aa		33.04	■■■□□ 2.88
SYNRG-227	ENST00000619976	DEFB118	Q96PH6	123 aa		33.04	■■■□□ 2.88
SYNRG-227	ENST00000619976	APBA2	Q99767	749 aa		33.04	■■■□□ 2.88
SYNRG-227	ENST00000619976	FBXO28	Q9NVF7	368 aa		33.04	■■■□□ 2.88
SYNRG-227	ENST00000619976	MTMR4	Q9NYA4	1195 aa		33.04	■■■□□ 2.88
SYNRG-227	ENST00000619976	PLIN4	Q96Q06	1357 aa		33.03	■■■□□ 2.88
SYNRG-227	ENST00000619976	CTDSPL2	Q05D32	466 aa		33.03	■■■□□ 2.88

Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms