RNA–Protein interactions for RNA: ENST00000619887.4

CDH23-213, Transcript of cadherin related 23, humanhuman

TSL 1 (best) BASIC

Gene CDH23, Length 4,224 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-213ENST00000619887 BCL2L12Q9HB09 334 aa11.22□□□□□ -0.61
CDH23-213ENST00000619887 PRM3Q9NNZ6 103 aa11.22□□□□□ -0.61
CDH23-213ENST00000619887 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.22□□□□□ -0.61
CDH23-213ENST00000619887 LONP1P36776 959 aaKnown RBP11.22□□□□□ -0.61
CDH23-213ENST00000619887 ASIC1P78348 528 aa11.22□□□□□ -0.61
CDH23-213ENST00000619887 PAK1Q13153 545 aa11.22□□□□□ -0.61
CDH23-213ENST00000619887 PTGDRQ13258 359 aa11.22□□□□□ -0.61
CDH23-213ENST00000619887 SHC4Q6S5L8 630 aa11.22□□□□□ -0.61
CDH23-213ENST00000619887 TMC4Q7Z404 712 aa11.22□□□□□ -0.61
CDH23-213ENST00000619887 IGSF22Q8N9C0 903 aa11.22□□□□□ -0.61
CDH23-213ENST00000619887 MAN1B1Q9UKM7 699 aa11.22□□□□□ -0.61
CDH23-213ENST00000619887 CYP2D7A0A087X1C5 515 aa11.21□□□□□ -0.61
CDH23-213ENST00000619887 POTEB2H3BUK9 544 aa11.21□□□□□ -0.61
CDH23-213ENST00000619887 GTPBP6O43824 516 aaPredicted RBP11.21□□□□□ -0.61
CDH23-213ENST00000619887 WDHD1O75717 1129 aaPredicted RBP11.21□□□□□ -0.61
CDH23-213ENST00000619887 PICALMQ13492 652 aa11.21□□□□□ -0.61
CDH23-213ENST00000619887 VPS72Q15906 364 aa11.21□□□□□ -0.61
CDH23-213ENST00000619887 AXDND1Q5T1B0 1012 aaPredicted RBP11.21□□□□□ -0.61
CDH23-213ENST00000619887 SPATA1Q5VX52 437 aa11.21□□□□□ -0.61
CDH23-213ENST00000619887 SYMPKQ92797 1274 aaKnown RBP11.21□□□□□ -0.61
CDH23-213ENST00000619887 FEZ1Q99689 392 aa11.21□□□□□ -0.61
CDH23-213ENST00000619887 NAA15Q9BXJ9 866 aaKnown RBP11.21□□□□□ -0.61
CDH23-213ENST00000619887 CTNND2Q9UQB3 1225 aa11.21□□□□□ -0.61
CDH23-213ENST00000619887 COL9A3Q14050 684 aaPredicted RBP11.21□□□□□ -0.61
CDH23-213ENST00000619887 NAP1L4Q99733 375 aaKnown RBP11.21□□□□□ -0.61
CDH23-213ENST00000619887 DCP1AQ9NPI6 582 aaPredicted RBP11.21□□□□□ -0.61
CDH23-213ENST00000619887 RIMBP2O15034 1052 aa11.21□□□□□ -0.62
CDH23-213ENST00000619887 TRMT44Q8IYL2 757 aaKnown RBP11.21□□□□□ -0.62
CDH23-213ENST00000619887 GBP3Q9H0R5 595 aa11.21□□□□□ -0.62
CDH23-213ENST00000619887 KCNF1Q9H3M0 494 aa11.21□□□□□ -0.62
CDH23-213ENST00000619887 SIPA1L3O60292 1781 aaPredicted RBP11.21□□□□□ -0.62
CDH23-213ENST00000619887 WDR78Q5VTH9 848 aa11.2□□□□□ -0.62
CDH23-213ENST00000619887 IQCEQ6IPM2 695 aa11.2□□□□□ -0.62
CDH23-213ENST00000619887 CTR9Q6PD62 1173 aa11.2□□□□□ -0.62
CDH23-213ENST00000619887 LAD1O00515 517 aa11.2□□□□□ -0.62
CDH23-213ENST00000619887 ADRA2BP18089 450 aa11.2□□□□□ -0.62
CDH23-213ENST00000619887 KCNQ4P56696 695 aa11.2□□□□□ -0.62
CDH23-213ENST00000619887 TUBB4BP68371 445 aa11.2□□□□□ -0.62
CDH23-213ENST00000619887 SYCP1Q15431 976 aa11.2□□□□□ -0.62
CDH23-213ENST00000619887 SPA17Q15506 151 aa11.2□□□□□ -0.62
CDH23-213ENST00000619887 HSP90B2PQ58FF3 399 aa11.2□□□□□ -0.62
CDH23-213ENST00000619887 SLC10A5Q5PT55 438 aa11.2□□□□□ -0.62
CDH23-213ENST00000619887 MFSD14BQ5SR56 506 aa11.2□□□□□ -0.62
CDH23-213ENST00000619887 FAM196AQ6ZSG2 479 aa11.2□□□□□ -0.62
CDH23-213ENST00000619887 FBXO33Q7Z6M2 555 aa11.2□□□□□ -0.62
CDH23-213ENST00000619887 ELOA2Q8IYF1 753 aaPredicted RBP11.2□□□□□ -0.62
CDH23-213ENST00000619887 LINC00116Q8NCU8 138 aa11.2□□□□□ -0.62
CDH23-213ENST00000619887 NSUN4Q96CB9 384 aaKnown RBP11.2□□□□□ -0.62
CDH23-213ENST00000619887 CCDC51Q96ER9 411 aa11.2□□□□□ -0.62
CDH23-213ENST00000619887 SH3GLB2Q9NR46 395 aa11.2□□□□□ -0.62
CDH23-213ENST00000619887 TUBE1Q9UJT0 475 aa11.2□□□□□ -0.62
CDH23-213ENST00000619887 ADAMTS7Q9UKP4 1686 aa11.2□□□□□ -0.62
CDH23-213ENST00000619887 BBOX1O75936 387 aa11.2□□□□□ -0.62
CDH23-213ENST00000619887 PLEKHA8P1O95397 391 aa11.2□□□□□ -0.62
CDH23-213ENST00000619887 BTDP43251 543 aa11.2□□□□□ -0.62
CDH23-213ENST00000619887 CBX1P83916 185 aa11.2□□□□□ -0.62
CDH23-213ENST00000619887 BMS1Q14692 1282 aaKnown RBP11.2□□□□□ -0.62
CDH23-213ENST00000619887 LETM2Q2VYF4 491 aa11.2□□□□□ -0.62
CDH23-213ENST00000619887 EHBP1Q8NDI1 1231 aa11.2□□□□□ -0.62
CDH23-213ENST00000619887 PCDHA4Q9UN74 947 aa11.2□□□□□ -0.62
CDH23-213ENST00000619887 TRAF1Q13077 416 aa11.2□□□□□ -0.62
CDH23-213ENST00000619887 KRT79Q5XKE5 535 aa11.2□□□□□ -0.62
CDH23-213ENST00000619887 GLT8D2Q9H1C3 349 aa11.2□□□□□ -0.62
CDH23-213ENST00000619887 IDEP14735 1019 aa11.19□□□□□ -0.62
CDH23-213ENST00000619887 PRDX5P30044 214 aa11.19□□□□□ -0.62
CDH23-213ENST00000619887 CCDC144BQ3MJ40 725 aa11.19□□□□□ -0.62
CDH23-213ENST00000619887 SBK1Q52WX2 424 aa11.19□□□□□ -0.62
CDH23-213ENST00000619887 ARL6IP4Q66PJ3 421 aaKnown RBP11.19□□□□□ -0.62
CDH23-213ENST00000619887 VSTM4Q8IW00 320 aa11.19□□□□□ -0.62
CDH23-213ENST00000619887 MAGEF1Q9HAY2 307 aa11.19□□□□□ -0.62
CDH23-213ENST00000619887 SENP2Q9HC62 589 aa11.19□□□□□ -0.62
CDH23-213ENST00000619887 COL14A1Q05707 1796 aaKnown RBP11.19□□□□□ -0.62
CDH23-213ENST00000619887 CYLC1P35663 651 aaPredicted RBP11.19□□□□□ -0.62
CDH23-213ENST00000619887 ZNF827Q17R98 1081 aa11.19□□□□□ -0.62
CDH23-213ENST00000619887 COL18A1P39060 1754 aa11.19□□□□□ -0.62
CDH23-213ENST00000619887 KLRF2D3W0D1 207 aa11.19□□□□□ -0.62
CDH23-213ENST00000619887 STX10O60499 249 aa11.19□□□□□ -0.62
CDH23-213ENST00000619887 ETF1P62495 437 aaKnown RBP11.19□□□□□ -0.62
CDH23-213ENST00000619887 UBXN1Q04323 297 aa11.19□□□□□ -0.62
CDH23-213ENST00000619887 NTRK3Q16288 839 aa11.19□□□□□ -0.62
CDH23-213ENST00000619887 ODF2Q5BJF6 829 aa11.19□□□□□ -0.62
CDH23-213ENST00000619887 JAKMIP3Q5VZ66 844 aa11.19□□□□□ -0.62
CDH23-213ENST00000619887 KDM4FA0A1W2PPD8 638 aa11.18□□□□□ -0.62
CDH23-213ENST00000619887 EIF3JO75822 258 aaKnown RBP11.18□□□□□ -0.62
CDH23-213ENST00000619887 TRIM21P19474 475 aaKnown RBP11.18□□□□□ -0.62
CDH23-213ENST00000619887 MRPL12P52815 198 aaKnown RBP11.18□□□□□ -0.62
CDH23-213ENST00000619887 CHMP4BP1P59074 171 aa11.18□□□□□ -0.62
CDH23-213ENST00000619887 PFKFB3Q16875 520 aaPredicted RBP11.18□□□□□ -0.62
CDH23-213ENST00000619887 FAM182BQ5T319 152 aa11.18□□□□□ -0.62
CDH23-213ENST00000619887 CUL5Q93034 780 aa11.18□□□□□ -0.62
CDH23-213ENST00000619887 FBXO2Q9UK22 296 aaPredicted RBP11.18□□□□□ -0.62
CDH23-213ENST00000619887 USO1O60763 962 aaKnown RBP11.18□□□□□ -0.62
CDH23-213ENST00000619887 USP17L8P0C7I0 530 aa11.18□□□□□ -0.62
CDH23-213ENST00000619887 GUCY1A2P33402 732 aa11.18□□□□□ -0.62
CDH23-213ENST00000619887 TUBB2AQ13885 445 aa11.18□□□□□ -0.62
CDH23-213ENST00000619887 PTPAQ15257 358 aa11.18□□□□□ -0.62
CDH23-213ENST00000619887 NOM1Q5C9Z4 860 aaKnown RBP11.18□□□□□ -0.62
CDH23-213ENST00000619887 ILDR1Q86SU0 546 aaPredicted RBP11.18□□□□□ -0.62
CDH23-213ENST00000619887 REXO1Q8N1G1 1221 aaKnown RBP11.18□□□□□ -0.62
CDH23-213ENST00000619887 TUBB2BQ9BVA1 445 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms