RNA–Protein interactions for RNA: ENST00000617432.4

CUL3-216, Transcript of cullin 3, humanhuman

TSL 5 BASIC

Gene CUL3, Length 1,426 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-216ENST00000617432 PHLPP1O60346 1717 aa6.77□□□□□ -1.33
CUL3-216ENST00000617432 PIK3R4Q99570 1358 aa6.77□□□□□ -1.33
CUL3-216ENST00000617432 MST1RQ04912 1400 aa6.76□□□□□ -1.33
CUL3-216ENST00000617432 NUAK1O60285 661 aa6.76□□□□□ -1.33
CUL3-216ENST00000617432 GLDCP23378 1020 aa6.76□□□□□ -1.33
CUL3-216ENST00000617432 GRIA4P48058 902 aa6.76□□□□□ -1.33
CUL3-216ENST00000617432 EHHADHQ08426 723 aa6.76□□□□□ -1.33
CUL3-216ENST00000617432 AP3B2Q13367 1082 aa6.76□□□□□ -1.33
CUL3-216ENST00000617432 C14orf37Q86TY3 774 aa6.76□□□□□ -1.33
CUL3-216ENST00000617432 STK32AQ8WU08 396 aa6.76□□□□□ -1.33
CUL3-216ENST00000617432 DDX17Q92841 729 aaKnown RBP6.76□□□□□ -1.33
CUL3-216ENST00000617432 HEXIM2Q96MH2 286 aaKnown RBP6.76□□□□□ -1.33
CUL3-216ENST00000617432 DISC1Q9NRI5 854 aa6.76□□□□□ -1.33
CUL3-216ENST00000617432 FOXD3Q9UJU5 478 aaPredicted RBP6.76□□□□□ -1.33
CUL3-216ENST00000617432 SMG5Q9UPR3 1016 aaKnown RBP6.76□□□□□ -1.33
CUL3-216ENST00000617432 PLEKHH1Q9ULM0 1364 aa6.76□□□□□ -1.33
CUL3-216ENST00000617432 RNGTTO60942 597 aaKnown RBP6.76□□□□□ -1.33
CUL3-216ENST00000617432 GDNFP39905 211 aa6.76□□□□□ -1.33
CUL3-216ENST00000617432 TCF12Q99081 682 aa6.76□□□□□ -1.33
CUL3-216ENST00000617432 EPB41L4BQ9H329 900 aa6.76□□□□□ -1.33
CUL3-216ENST00000617432 DCP1AQ9NPI6 582 aaPredicted RBP6.76□□□□□ -1.33
CUL3-216ENST00000617432 SLAIN2Q9P270 581 aa6.76□□□□□ -1.33
CUL3-216ENST00000617432 SEPT3Q9UH03 358 aa6.76□□□□□ -1.33
CUL3-216ENST00000617432 LRP6O75581 1613 aa6.75□□□□□ -1.33
CUL3-216ENST00000617432 PIK3C2GO75747 1445 aa6.75□□□□□ -1.33
CUL3-216ENST00000617432 ADGRL3Q9HAR2 1447 aa6.75□□□□□ -1.33
CUL3-216ENST00000617432 IGF2BP3O00425 579 aaKnown RBP eCLIP6.75□□□□□ -1.33
CUL3-216ENST00000617432 LIG1P18858 919 aa6.75□□□□□ -1.33
CUL3-216ENST00000617432 TMEM132EQ6IEE7 984 aa6.75□□□□□ -1.33
CUL3-216ENST00000617432 FAM214BQ7L5A3 538 aa6.75□□□□□ -1.33
CUL3-216ENST00000617432 SPACA3Q8IXA5 215 aa6.75□□□□□ -1.33
CUL3-216ENST00000617432 TOP6BLQ8N6T0 577 aa6.75□□□□□ -1.33
CUL3-216ENST00000617432 HELQQ8TDG4 1101 aa6.75□□□□□ -1.33
CUL3-216ENST00000617432 CLP1Q92989 425 aaKnown RBP6.75□□□□□ -1.33
CUL3-216ENST00000617432 LIN7BQ9HAP6 207 aa6.75□□□□□ -1.33
CUL3-216ENST00000617432 ZFYVE28Q9HCC9 887 aa6.75□□□□□ -1.33
CUL3-216ENST00000617432 GTF2IRD1Q9UHL9 959 aa6.75□□□□□ -1.33
CUL3-216ENST00000617432 ANKRD30BQ9BXX2 1392 aa6.75□□□□□ -1.33
CUL3-216ENST00000617432 PTCH1Q13635 1447 aa6.74□□□□□ -1.33
CUL3-216ENST00000617432 AHDC1Q5TGY3 1603 aaPredicted RBP6.74□□□□□ -1.33
CUL3-216ENST00000617432 ETV2O00321 342 aaPredicted RBP6.74□□□□□ -1.33
CUL3-216ENST00000617432 LINC00310P59036 64 aa6.74□□□□□ -1.33
CUL3-216ENST00000617432 TTLL4Q14679 1199 aa6.74□□□□□ -1.33
CUL3-216ENST00000617432 BRINP3Q76B58 766 aa6.74□□□□□ -1.33
CUL3-216ENST00000617432 WDR89Q96FK6 387 aaPredicted RBP6.74□□□□□ -1.33
CUL3-216ENST00000617432 STK26Q9P289 416 aa6.74□□□□□ -1.33
CUL3-216ENST00000617432 RGS17Q9UGC6 210 aaPredicted RBP6.74□□□□□ -1.33
CUL3-216ENST00000617432 POLIQ9UNA4 740 aa6.74□□□□□ -1.33
CUL3-216ENST00000617432 NCOA3Q9Y6Q9 1424 aa6.73□□□□□ -1.33
CUL3-216ENST00000617432 NHSL1Q5SYE7 1610 aa6.73□□□□□ -1.33
CUL3-216ENST00000617432 NRXN1Q9ULB1 1477 aa6.73□□□□□ -1.33
CUL3-216ENST00000617432 A0A1W2PP55 124 aa6.73□□□□□ -1.33
CUL3-216ENST00000617432 SYN1P17600 705 aa6.73□□□□□ -1.33
CUL3-216ENST00000617432 EIF1AXP47813 144 aaKnown RBP6.73□□□□□ -1.33
CUL3-216ENST00000617432 HNRNPUQ00839 825 aaKnown RBP eCLIP6.73□□□□□ -1.33
CUL3-216ENST00000617432 ALKBH2Q6NS38 261 aa6.73□□□□□ -1.33
CUL3-216ENST00000617432 WAPLQ7Z5K2 1190 aa6.73□□□□□ -1.33
CUL3-216ENST00000617432 ZCCHC4Q9H5U6 513 aa6.73□□□□□ -1.33
CUL3-216ENST00000617432 C19orf44Q9H6X5 657 aa6.73□□□□□ -1.33
CUL3-216ENST00000617432 C19orf73Q9NVV2 129 aa6.73□□□□□ -1.33
CUL3-216ENST00000617432 KNDC1Q76NI1 1749 aa6.73□□□□□ -1.33
CUL3-216ENST00000617432 PRAG1Q86YV5 1406 aa6.72□□□□□ -1.33
CUL3-216ENST00000617432 RPGRIP1LQ68CZ1 1315 aa6.72□□□□□ -1.33
CUL3-216ENST00000617432 PITPNM2Q9BZ72 1349 aa6.72□□□□□ -1.33
CUL3-216ENST00000617432 MYOM2P54296 1465 aa6.72□□□□□ -1.33
CUL3-216ENST00000617432 ATF3P18847 181 aa6.72□□□□□ -1.33
CUL3-216ENST00000617432 USP5P45974 858 aa6.72□□□□□ -1.33
CUL3-216ENST00000617432 CLCN7P51798 805 aa6.72□□□□□ -1.33
CUL3-216ENST00000617432 KIF4BQ2VIQ3 1234 aa6.72□□□□□ -1.33
CUL3-216ENST00000617432 CCDC86Q9H6F5 360 aaKnown RBP6.72□□□□□ -1.33
CUL3-216ENST00000617432 DCCP43146 1447 aa6.72□□□□□ -1.33
CUL3-216ENST00000617432 C1orf167Q5SNV9 1468 aa6.71□□□□□ -1.33
CUL3-216ENST00000617432 LRPPRCP42704 1394 aaKnown RBP6.71□□□□□ -1.33
CUL3-216ENST00000617432 DHX57Q6P158 1386 aaKnown RBP6.71□□□□□ -1.33
CUL3-216ENST00000617432 HCLS1P14317 486 aaPredicted RBP6.71□□□□□ -1.34
CUL3-216ENST00000617432 NKPD1Q17RQ9 610 aa6.71□□□□□ -1.34
CUL3-216ENST00000617432 KCNN1Q92952 543 aa6.71□□□□□ -1.34
CUL3-216ENST00000617432 CCDC120Q96HB5 630 aa6.71□□□□□ -1.34
CUL3-216ENST00000617432 ORAI2Q96SN7 254 aa6.71□□□□□ -1.34
CUL3-216ENST00000617432 ZNF576Q9H609 170 aa6.71□□□□□ -1.34
CUL3-216ENST00000617432 KCNK12Q9HB15 430 aa6.71□□□□□ -1.34
CUL3-216ENST00000617432 PCDHGC5Q9Y5F6 944 aa6.71□□□□□ -1.34
CUL3-216ENST00000617432 YTHDC2Q9H6S0 1430 aaKnown RBP6.71□□□□□ -1.34
CUL3-216ENST00000617432 ADGRB1O14514 1584 aa6.71□□□□□ -1.34
CUL3-216ENST00000617432 CDC42BPGQ6DT37 1551 aa6.71□□□□□ -1.34
CUL3-216ENST00000617432 SHPRHQ149N8 1683 aa6.7□□□□□ -1.34
CUL3-216ENST00000617432 ZNF862O60290 1169 aa6.7□□□□□ -1.34
CUL3-216ENST00000617432 POLR3DP05423 398 aaPredicted RBP6.7□□□□□ -1.34
CUL3-216ENST00000617432 IRF2BPLQ9H1B7 796 aa6.7□□□□□ -1.34
CUL3-216ENST00000617432 CARS2Q9HA77 564 aaKnown RBP6.7□□□□□ -1.34
CUL3-216ENST00000617432 SSU72Q9NP77 194 aaKnown RBP6.7□□□□□ -1.34
CUL3-216ENST00000617432 TECPR2O15040 1411 aa6.7□□□□□ -1.34
CUL3-216ENST00000617432 JCADQ9P266 1359 aa6.7□□□□□ -1.34
CUL3-216ENST00000617432 A0A0G2JLL6 359 aaPredicted RBP6.69□□□□□ -1.34
CUL3-216ENST00000617432 SRFP11831 508 aa6.69□□□□□ -1.34
CUL3-216ENST00000617432 ITPKAP23677 461 aa6.69□□□□□ -1.34
CUL3-216ENST00000617432 XPCQ01831 940 aaPredicted RBP6.69□□□□□ -1.34
CUL3-216ENST00000617432 SAFB2Q14151 953 aaKnown RBP eCLIP6.69□□□□□ -1.34
CUL3-216ENST00000617432 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.69□□□□□ -1.34
CUL3-216ENST00000617432 GALNT12Q8IXK2 581 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms