RNA–Protein interactions for RNA: ENST00000612045.4

CBWD1-220, Transcript of COBW domain containing 1, humanhuman

TSL 1 (best)

Gene CBWD1, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-220ENST00000612045 HERC5Q9UII4 1024 aaKnown RBP14.26□□□□□ -0.13
CBWD1-220ENST00000612045 V9GY48 417 aaPredicted RBP14.26□□□□□ -0.13
CBWD1-220ENST00000612045 DICER1Q9UPY3 1922 aaKnown RBP14.26□□□□□ -0.13
CBWD1-220ENST00000612045 PALM3A6NDB9 673 aaPredicted RBP14.25□□□□□ -0.13
CBWD1-220ENST00000612045 MYH6P13533 1939 aa14.25□□□□□ -0.13
CBWD1-220ENST00000612045 KIF23Q02241 960 aaPredicted RBP14.25□□□□□ -0.13
CBWD1-220ENST00000612045 PKN1Q16512 942 aa14.25□□□□□ -0.13
CBWD1-220ENST00000612045 PPP4R3BQ5MIZ7 849 aa14.25□□□□□ -0.13
CBWD1-220ENST00000612045 CLEC10AQ8IUN9 316 aa14.25□□□□□ -0.13
CBWD1-220ENST00000612045 GPT2Q8TD30 523 aa14.25□□□□□ -0.13
CBWD1-220ENST00000612045 TMEM39BQ9GZU3 492 aa14.25□□□□□ -0.13
CBWD1-220ENST00000612045 TFIP11Q9UBB9 837 aaKnown RBP14.25□□□□□ -0.13
CBWD1-220ENST00000612045 CLIP2Q9UDT6 1046 aa14.25□□□□□ -0.13
CBWD1-220ENST00000612045 MTMR7Q9Y216 660 aa14.25□□□□□ -0.13
CBWD1-220ENST00000612045 SBF1O95248 1867 aa14.25□□□□□ -0.13
CBWD1-220ENST00000612045 hCG_1642624A0A1W2PR95 340 aa14.25□□□□□ -0.13
CBWD1-220ENST00000612045 GADD45BO75293 160 aaPredicted RBP14.25□□□□□ -0.13
CBWD1-220ENST00000612045 SAMD7Q7Z3H4 446 aa14.25□□□□□ -0.13
CBWD1-220ENST00000612045 BRAPQ7Z569 592 aa14.25□□□□□ -0.13
CBWD1-220ENST00000612045 SCAND2PQ9GZW5 306 aaPredicted RBP14.25□□□□□ -0.13
CBWD1-220ENST00000612045 KIF28PB7ZC32 967 aa14.24□□□□□ -0.13
CBWD1-220ENST00000612045 PARP1P09874 1014 aaKnown RBP14.24□□□□□ -0.13
CBWD1-220ENST00000612045 YBX3P16989 372 aaKnown RBP eCLIP14.24□□□□□ -0.13
CBWD1-220ENST00000612045 SHROOM1Q2M3G4 852 aaPredicted RBP14.24□□□□□ -0.13
CBWD1-220ENST00000612045 ATL3Q6DD88 541 aa14.24□□□□□ -0.13
CBWD1-220ENST00000612045 RASGRP2Q7LDG7 609 aa14.24□□□□□ -0.13
CBWD1-220ENST00000612045 LRRC47Q8N1G4 583 aaKnown RBP14.24□□□□□ -0.13
CBWD1-220ENST00000612045 LZTS2Q9BRK4 669 aa14.24□□□□□ -0.13
CBWD1-220ENST00000612045 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.24□□□□□ -0.13
CBWD1-220ENST00000612045 PGAP2Q9UHJ9 254 aa14.24□□□□□ -0.13
CBWD1-220ENST00000612045 CFAP45Q9UL16 551 aa14.24□□□□□ -0.13
CBWD1-220ENST00000612045 BAZ2BQ9UIF8 2168 aaKnown RBP14.24□□□□□ -0.13
CBWD1-220ENST00000612045 MYH15Q9Y2K3 1946 aa14.23□□□□□ -0.13
CBWD1-220ENST00000612045 ELP1O95163 1332 aa14.23□□□□□ -0.13
CBWD1-220ENST00000612045 USP17L5A8MUK1 530 aa14.23□□□□□ -0.13
CBWD1-220ENST00000612045 GDF11O95390 407 aa14.23□□□□□ -0.13
CBWD1-220ENST00000612045 MBD3O95983 291 aa14.23□□□□□ -0.13
CBWD1-220ENST00000612045 MMP1P03956 469 aa14.23□□□□□ -0.13
CBWD1-220ENST00000612045 XBP1P17861 261 aa14.23□□□□□ -0.13
CBWD1-220ENST00000612045 TNNI2P48788 182 aa14.23□□□□□ -0.13
CBWD1-220ENST00000612045 ABCB5Q2M3G0 1257 aa14.23□□□□□ -0.13
CBWD1-220ENST00000612045 TBC1D10BQ4KMP7 808 aaPredicted RBP14.23□□□□□ -0.13
CBWD1-220ENST00000612045 USP17L2Q6R6M4 530 aa14.23□□□□□ -0.13
CBWD1-220ENST00000612045 TMEM179Q6ZVK1 233 aa14.23□□□□□ -0.13
CBWD1-220ENST00000612045 CDAN1Q8IWY9 1227 aa14.23□□□□□ -0.13
CBWD1-220ENST00000612045 GPC2Q8N158 579 aa14.23□□□□□ -0.13
CBWD1-220ENST00000612045 KANSL2Q9H9L4 492 aa14.23□□□□□ -0.13
CBWD1-220ENST00000612045 RBM27Q9P2N5 1060 aaKnown RBP14.23□□□□□ -0.13
CBWD1-220ENST00000612045 KCNJ14Q9UNX9 436 aa14.23□□□□□ -0.13
CBWD1-220ENST00000612045 KLRF2D3W0D1 207 aa14.22□□□□□ -0.13
CBWD1-220ENST00000612045 H7C1D1 291 aa14.22□□□□□ -0.13
CBWD1-220ENST00000612045 TBC1D12O60347 775 aa14.22□□□□□ -0.13
CBWD1-220ENST00000612045 GOLGA8HP0CJ92 632 aa14.22□□□□□ -0.13
CBWD1-220ENST00000612045 PDHBP11177 359 aa14.22□□□□□ -0.13
CBWD1-220ENST00000612045 U2AF2P26368 475 aaKnown RBP eCLIP14.22□□□□□ -0.13
CBWD1-220ENST00000612045 UBE2HP62256 183 aa14.22□□□□□ -0.13
CBWD1-220ENST00000612045 ATP2B2Q01814 1243 aa14.22□□□□□ -0.13
CBWD1-220ENST00000612045 GNL2Q13823 731 aaKnown RBP14.22□□□□□ -0.13
CBWD1-220ENST00000612045 TNFAIP1Q13829 316 aa14.22□□□□□ -0.13
CBWD1-220ENST00000612045 RRP1BQ14684 758 aaKnown RBP14.22□□□□□ -0.13
CBWD1-220ENST00000612045 SAFBQ15424 915 aaKnown RBP eCLIP14.22□□□□□ -0.13
CBWD1-220ENST00000612045 KIF4BQ2VIQ3 1234 aa14.22□□□□□ -0.13
CBWD1-220ENST00000612045 LEO1Q8WVC0 666 aaPredicted RBP14.22□□□□□ -0.13
CBWD1-220ENST00000612045 SPATA32Q96LK8 384 aa14.22□□□□□ -0.13
CBWD1-220ENST00000612045 ZNF396Q96N95 335 aaPredicted RBP14.22□□□□□ -0.13
CBWD1-220ENST00000612045 GZF1Q9H116 711 aaPredicted RBP14.22□□□□□ -0.13
CBWD1-220ENST00000612045 VPS54Q9P1Q0 977 aa14.22□□□□□ -0.13
CBWD1-220ENST00000612045 CYTH3O43739 400 aa14.22□□□□□ -0.13
CBWD1-220ENST00000612045 SNHG28P0DPA3 235 aa14.22□□□□□ -0.13
CBWD1-220ENST00000612045 SCG2P13521 617 aa14.22□□□□□ -0.13
CBWD1-220ENST00000612045 RASA3Q14644 834 aa14.22□□□□□ -0.13
CBWD1-220ENST00000612045 SEPT2Q15019 361 aa14.22□□□□□ -0.13
CBWD1-220ENST00000612045 PFKFB3Q16875 520 aaPredicted RBP14.22□□□□□ -0.13
CBWD1-220ENST00000612045 SLC35G1Q2M3R5 365 aa14.22□□□□□ -0.13
CBWD1-220ENST00000612045 MYSM1Q5VVJ2 828 aa14.22□□□□□ -0.13
CBWD1-220ENST00000612045 MKL1Q969V6 931 aa14.22□□□□□ -0.13
CBWD1-220ENST00000612045 SHISA4Q96DD7 197 aa14.22□□□□□ -0.13
CBWD1-220ENST00000612045 NYAP2Q9P242 653 aa14.22□□□□□ -0.13
CBWD1-220ENST00000612045 MYH4Q9Y623 1939 aa14.22□□□□□ -0.13
CBWD1-220ENST00000612045 ASTN2O75129 1339 aaPredicted RBP14.21□□□□□ -0.13
CBWD1-220ENST00000612045 GH2P01242 217 aa14.21□□□□□ -0.13
CBWD1-220ENST00000612045 EEF2P13639 858 aaKnown RBP14.21□□□□□ -0.13
CBWD1-220ENST00000612045 JAG1P78504 1218 aa14.21□□□□□ -0.13
CBWD1-220ENST00000612045 CEBPZQ03701 1054 aaKnown RBP14.21□□□□□ -0.13
CBWD1-220ENST00000612045 ASPRV1Q53RT3 343 aa14.21□□□□□ -0.13
CBWD1-220ENST00000612045 DIS3L2Q8IYB7 885 aaKnown RBP14.21□□□□□ -0.13
CBWD1-220ENST00000612045 PIBF1Q8WXW3 757 aa14.21□□□□□ -0.13
CBWD1-220ENST00000612045 USP28Q96RU2 1077 aa14.21□□□□□ -0.13
CBWD1-220ENST00000612045 SPZ1Q9BXG8 430 aa14.21□□□□□ -0.13
CBWD1-220ENST00000612045 FTOQ9C0B1 505 aaKnown RBP eCLIP14.21□□□□□ -0.13
CBWD1-220ENST00000612045 CABP5Q9NP86 173 aa14.21□□□□□ -0.13
CBWD1-220ENST00000612045 GPRC5DQ9NZD1 345 aa14.21□□□□□ -0.13
CBWD1-220ENST00000612045 HACL1Q9UJ83 578 aa14.21□□□□□ -0.13
CBWD1-220ENST00000612045 SCAF8Q9UPN6 1271 aaKnown RBP14.21□□□□□ -0.13
CBWD1-220ENST00000612045 BTBD18B2RXH4 712 aa14.2□□□□□ -0.14
CBWD1-220ENST00000612045 VEGFAP15692 232 aaPredicted RBP14.2□□□□□ -0.14
CBWD1-220ENST00000612045 SMARCA1P28370 1054 aa14.2□□□□□ -0.14
CBWD1-220ENST00000612045 MAP3K10Q02779 954 aa14.2□□□□□ -0.14
CBWD1-220ENST00000612045 ICA1Q05084 483 aa14.2□□□□□ -0.14
CBWD1-220ENST00000612045 MIGA2Q7L4E1 593 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms